Enrichment in phenotype: Veh (8 samples)
- 30 / 89 gene sets are upregulated in phenotype Veh
- 0 gene sets are significant at FDR < 25%
- 0 gene sets are significantly enriched at nominal pvalue < 1%
- 3 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results
Enrichment in phenotype: Shh (8 samples)
- 59 / 89 gene sets are upregulated in phenotype Shh
- 1 gene sets are significantly enriched at FDR < 25%
- 2 gene sets are significantly enriched at nominal pvalue < 1%
- 3 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results
Dataset details
- The dataset has 5379 features (genes)
- No probe set => gene symbol collapsing was requested, so all 5379 features were used
Gene set details
- Gene set size filters (min=15, max=500) resulted in filtering out 237 / 326 gene sets
- The remaining 89 gene sets were used in the analysis
- List of gene sets used and their sizes (restricted to features in the specified dataset)
Gene markers for the Veh versus Shh comparison
- The dataset has 5379 features (genes)
- # of markers for phenotype Veh: 2392 (44.5% ) with correlation area 40.2%
- # of markers for phenotype Shh: 2987 (55.5% ) with correlation area 59.8%
- Detailed rank ordered gene list for all features in the dataset
- Heat map and gene list correlation profile for all features in the dataset
- Buttefly plot of significant genes
Global statistics and plots
