#### Enrichment in phenotype: adjacent_normal (28 samples)

- 134 / 215 gene sets are upregulated in phenotype adjacent_normal
- 0 gene sets are significant at FDR < 25%
- 3 gene sets are significantly enriched at nominal pvalue < 1%
- 17 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results

#### Enrichment in phenotype: Tumor (31 samples)

- 81 / 215 gene sets are upregulated in phenotype Tumor
- 0 gene sets are significantly enriched at FDR < 25%
- 0 gene sets are significantly enriched at nominal pvalue < 1%
- 0 gene sets are significantly enriched at nominal pvalue < 5%
- Snapshot of enrichment results
- Detailed enrichment results in html format
- Detailed enrichment results in excel format (tab delimited text)
- Guide to interpret results

#### Dataset details

- The dataset has 13321 features (genes)
- No probe set => gene symbol collapsing was requested, so all 13321 features were used

#### Gene set details

- Gene set size filters (min=15, max=500) resulted in filtering out 111 / 326 gene sets
- The remaining 215 gene sets were used in the analysis
- List of gene sets used and their sizes (restricted to features in the specified dataset)

#### Gene markers for the adjacent_normal versus Tumor comparison

- The dataset has 13321 features (genes)
- # of markers for phenotype adjacent_normal: 5066 (38.0% ) with correlation area 47.9%
- # of markers for phenotype Tumor: 8255 (62.0% ) with correlation area 52.1%
- Detailed rank ordered gene list for all features in the dataset
- Heat map and gene list correlation profile for all features in the dataset
- Buttefly plot of significant genes

#### Global statistics and plots

- Plot of p-values vs. NES
- Global ES histogram

#### Other

- Parameters used for this analysis