Datasetp53_full_useme_maxed_cs.gct
PhenotypeWT
GeneSets2.symbols.gmt#ca_nf_at_signalling
Enrichment Score (ES)0.32990462
Normalized Enrichment Score (NES)1.2849063
Nominal p-value0.13381556
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1CDKN1ACDKN1A
StanfordSource,  GeneCards
cyclin-dependent kinase inhibitor 1A (p21, Cip1)00.8430.0541Yes
2IFNA1IFNA1
StanfordSource,  GeneCards
interferon, alpha 1480.4510.0784Yes
3BCL2BCL2
StanfordSource,  GeneCards
B-cell CLL/lymphoma 2710.4200.1031Yes
4NFATC1NFATC1
StanfordSource,  GeneCards
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 11030.4000.1257Yes
5P2RX7P2RX7
StanfordSource,  GeneCards
purinergic receptor P2X, ligand-gated ion channel, 71290.3890.1482Yes
6IL4IL4
StanfordSource,  GeneCards
interleukin 42060.3540.1633Yes
7TNFTNF
StanfordSource,  GeneCards
tumor necrosis factor (TNF superfamily, member 2)2640.3400.1794Yes
8MAP2K7MAP2K7
StanfordSource,  GeneCards
mitogen-activated protein kinase kinase 74650.3040.1790Yes
9MEF2DMEF2D
StanfordSource,  GeneCards
MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)4720.3030.1978Yes
10CAMK2BCAMK2B
StanfordSource,  GeneCards
calcium/calmodulin-dependent protein kinase (CaM kinase) II beta5140.2950.2127Yes
11OPRD1OPRD1
StanfordSource,  GeneCards
opioid receptor, delta 16890.2720.2127Yes
12TNFSF5TNFSF5
StanfordSource,  GeneCards
tumor necrosis factor (ligand) superfamily, member 5 (hyper-IgM syndrome)7030.2700.2288Yes
13ICOSICOS
StanfordSource,  GeneCards
inducible T-cell co-stimulator8180.2570.2339Yes
14GAPDGAPD
StanfordSource,  GeneCards
glyceraldehyde-3-phosphate dehydrogenase8230.2570.2499Yes
15IFNB1IFNB1
StanfordSource,  GeneCards
interferon, beta 1, fibroblast9050.2490.2578Yes
16CD3ZCD3Z
StanfordSource,  GeneCards
CD3Z antigen, zeta polypeptide (TiT3 complex)12380.2240.2390Yes
17EGR3EGR3
StanfordSource,  GeneCards
early growth response 313660.2160.2402Yes
18IL1BIL1B
StanfordSource,  GeneCards
interleukin 1, beta13960.2140.2510Yes
19NCK2NCK2
StanfordSource,  GeneCards
NCK adaptor protein 214270.2120.2616Yes
20CABIN1CABIN1
StanfordSource,  GeneCards
calcineurin binding protein 115140.2050.2662Yes
21VAV2VAV2
StanfordSource,  GeneCards
vav 2 oncogene15950.2000.2710Yes
22GATA4GATA4
StanfordSource,  GeneCards
GATA binding protein 416820.1940.2749Yes
23IFNGIFNG
StanfordSource,  GeneCards
interferon, gamma17410.1910.2813Yes
24IL2IL2
StanfordSource,  GeneCards
interleukin 217910.1870.2885Yes
25VAV1VAV1
StanfordSource,  GeneCards
vav 1 oncogene18170.1850.2979Yes
26PPIAPPIA
StanfordSource,  GeneCards
peptidylprolyl isomerase A (cyclophilin A)18810.1820.3033Yes
27PPP3R1PPP3R1
StanfordSource,  GeneCards
protein phosphatase 3 (formerly 2B), regulatory subunit B, 19kDa, alpha isoform (calcineurin B, type I)18980.1810.3133Yes
28SLASLA
StanfordSource,  GeneCards
Src-like-adaptor19160.1800.3231Yes
29CAMK4CAMK4
StanfordSource,  GeneCards
calcium/calmodulin-dependent protein kinase IV19630.1770.3299Yes
30ITKITK
StanfordSource,  GeneCards
IL2-inducible T-cell kinase22260.1610.3141No
31CD3ECD3E
StanfordSource,  GeneCards
CD3E antigen, epsilon polypeptide (TiT3 complex)22940.1570.3175No
32MEF2BMEF2B
StanfordSource,  GeneCards
MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B)25050.1460.3059No
33JUNBJUNB
StanfordSource,  GeneCards
jun B proto-oncogene25270.1450.3131No
34IL3IL3
StanfordSource,  GeneCards
interleukin 3 (colony-stimulating factor, multiple)26510.1380.3097No
35RPL13ARPL13A
StanfordSource,  GeneCards
ribosomal protein L13a27660.1320.3068No
36PTPRCPTPRC
StanfordSource,  GeneCards
protein tyrosine phosphatase, receptor type, C28850.1260.3031No
37IL10IL10
StanfordSource,  GeneCards
interleukin 1032110.1110.2777No
38GSK3BGSK3B
StanfordSource,  GeneCards
glycogen synthase kinase 3 beta32460.1090.2813No
39MEF2AMEF2A
StanfordSource,  GeneCards
MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A)33920.1030.2734No
40IL2RAIL2RA
StanfordSource,  GeneCards
interleukin 2 receptor, alpha35630.0950.2625No
41GSK3AGSK3A
StanfordSource,  GeneCards
glycogen synthase kinase 3 alpha37250.0870.2520No
42FLJ14639FLJ14639
StanfordSource,  GeneCards
hypothetical protein FLJ1463937590.0850.2542No
43CD3GCD3G
StanfordSource,  GeneCards
CD3G antigen, gamma polypeptide (TiT3 complex)40500.0720.2298No
44FCER1AFCER1A
StanfordSource,  GeneCards
Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide40770.0710.2318No
45GATA3GATA3
StanfordSource,  GeneCards
GATA binding protein 341030.0700.2337No
46CREBBPCREBBP
StanfordSource,  GeneCards
CREB binding protein (Rubinstein-Taybi syndrome)43560.0590.2123No
47IL8IL8
StanfordSource,  GeneCards
interleukin 844210.0560.2095No
48PIN1PIN1
StanfordSource,  GeneCards
protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 145320.0520.2019No
49CD69CD69
StanfordSource,  GeneCards
CD69 antigen (p60, early T-cell activation antigen)45440.0510.2040No
50NFKBIBNFKBIB
StanfordSource,  GeneCards
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta46510.0460.1964No
51NFKBIENFKBIE
StanfordSource,  GeneCards
nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon50180.0300.1617No
52KPNA5KPNA5
StanfordSource,  GeneCards
karyopherin alpha 5 (importin alpha 6)51540.0240.1498No
53IL8RAIL8RA
StanfordSource,  GeneCards
interleukin 8 receptor, alpha52390.0210.1427No
54FCGR3AFCGR3A
StanfordSource,  GeneCards
Fc fragment of IgG, low affinity IIIa, receptor for (CD16)54920.0100.1182No
55IL13IL13
StanfordSource,  GeneCards
interleukin 135738-0.0010.0938No
56SP3SP3
StanfordSource,  GeneCards
Sp3 transcription factor5757-0.0020.0921No
57MYF5MYF5
StanfordSource,  GeneCards
myogenic factor 55941-0.0100.0745No
58NFATC4NFATC4
StanfordSource,  GeneCards
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 46114-0.0190.0585No
59TNFSF6TNFSF6
StanfordSource,  GeneCards
tumor necrosis factor (ligand) superfamily, member 66238-0.0240.0478No
60CEBPBCEBPB
StanfordSource,  GeneCards
CCAAT/enhancer binding protein (C/EBP), beta6519-0.0370.0222No
61NPPBNPPB
StanfordSource,  GeneCards
natriuretic peptide precursor B6875-0.055-0.0097No
62NUP214NUP214
StanfordSource,  GeneCards
nucleoporin 214kDa6882-0.055-0.0068No
63CALM1CALM1
StanfordSource,  GeneCards
calmodulin 1 (phosphorylase kinase, delta)6929-0.058-0.0077No
64NFAT5NFAT5
StanfordSource,  GeneCards
nuclear factor of activated T-cells 5, tonicity-responsive7071-0.065-0.0176No
65TRAF2TRAF2
StanfordSource,  GeneCards
TNF receptor-associated factor 27348-0.079-0.0401No
66FKBP1BFKBP1B
StanfordSource,  GeneCards
FK506 binding protein 1B, 12.6 kDa7379-0.081-0.0379No
67HRASHRAS
StanfordSource,  GeneCards
v-Ha-ras Harvey rat sarcoma viral oncogene homolog7563-0.090-0.0504No
68BADBAD
StanfordSource,  GeneCards
BCL2-antagonist of cell death7728-0.099-0.0604No
69SP1SP1
StanfordSource,  GeneCards
Sp1 transcription factor7738-0.100-0.0549No
70TGFB1TGFB1
StanfordSource,  GeneCards
transforming growth factor, beta 1 (Camurati-Engelmann disease)7814-0.105-0.0557No
71PPP3CCPPP3CC
StanfordSource,  GeneCards
protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (calcineurin A gamma)7825-0.105-0.0499No
72GRLF1GRLF1
StanfordSource,  GeneCards
glucocorticoid receptor DNA binding factor 17874-0.108-0.0478No
73MAPK8MAPK8
StanfordSource,  GeneCards
mitogen-activated protein kinase 87956-0.112-0.0487No
74ACTBACTB
StanfordSource,  GeneCards
actin, beta7993-0.114-0.0450No
75CSF2CSF2
StanfordSource,  GeneCards
colony stimulating factor 2 (granulocyte-macrophage)8002-0.114-0.0385No
76IL6IL6
StanfordSource,  GeneCards
interleukin 6 (interferon, beta 2)8024-0.115-0.0332No
77EGR2EGR2
StanfordSource,  GeneCards
early growth response 2 (Krox-20 homolog, Drosophila)8042-0.116-0.0274No
78CALM3CALM3
StanfordSource,  GeneCards
calmodulin 3 (phosphorylase kinase, delta)8068-0.118-0.0223No
79TRPV6TRPV6
StanfordSource,  GeneCards
transient receptor potential cation channel, subfamily V, member 68125-0.122-0.0201No
80CSNK2A1CSNK2A1
StanfordSource,  GeneCards
casein kinase 2, alpha 1 polypeptide8167-0.125-0.0162No
81FOSL1FOSL1
StanfordSource,  GeneCards
FOS-like antigen 18223-0.129-0.0134No
82MAPK14MAPK14
StanfordSource,  GeneCards
mitogen-activated protein kinase 148605-0.156-0.0414No
83FOSFOS
StanfordSource,  GeneCards
v-fos FBJ murine osteosarcoma viral oncogene homolog8716-0.163-0.0420No
84CSNK2BCSNK2B
StanfordSource,  GeneCards
casein kinase 2, beta polypeptide8855-0.173-0.0447No
85MAPK9MAPK9
StanfordSource,  GeneCards
mitogen-activated protein kinase 98908-0.177-0.0385No
86SFNSFN
StanfordSource,  GeneCards
stratifin9070-0.190-0.0424No
87NFATC3NFATC3
StanfordSource,  GeneCards
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 39112-0.193-0.0341No
88CALM2CALM2
StanfordSource,  GeneCards
calmodulin 2 (phosphorylase kinase, delta)9251-0.205-0.0347No
89PAK1PAK1
StanfordSource,  GeneCards
p21/Cdc42/Rac1-activated kinase 1 (STE20 homolog, yeast)9376-0.218-0.0331No
90NFKB2NFKB2
StanfordSource,  GeneCards
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)9443-0.226-0.0252No
91CNR1CNR1
StanfordSource,  GeneCards
cannabinoid receptor 1 (brain)9496-0.233-0.0154No
92VEGFVEGF
StanfordSource,  GeneCards
vascular endothelial growth factor9617-0.251-0.0112No
93PPP3CBPPP3CB
StanfordSource,  GeneCards
protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta)9639-0.2540.0030No
94RELARELA
StanfordSource,  GeneCards
v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian)9904-0.317-0.0030No
95EP300EP300
StanfordSource,  GeneCards
E1A binding protein p3009993-0.3490.0106No
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: p53_full_useme_maxed_cs.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for ca_nf_at_signalling   
Histogram of random enrichment scores (real ES = 0.32990462 )