DatasetLeukemia_collapsed.gct
PhenotypeALL
GeneSetC1.symbols.gmt#chr6q21
Enrichment Score (ES)0.6638114
Normalized Enrichment Score (NES)1.9878064
Nominal p-value0.0019267823
FDR q-value0.038908884
FWER p-Value0.032
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1CD24CD24
StanfordSource,  GeneCards
CD24 antigen (small cell lung carcinoma cluster 4 antigen)22.2930.1429Yes
2C6orf4C6orf4
StanfordSource,  GeneCards
chromosome 6 open reading frame 4821.2250.2114Yes
3C6orf51C6orf51
StanfordSource,  GeneCards
chromosome 6 open reading frame 511421.1230.2756Yes
4REV3LREV3L
StanfordSource,  GeneCards
REV3-like, catalytic subunit of DNA polymerase zeta (yeast)2091.0360.3336Yes
5ARMC2ARMC2
StanfordSource,  GeneCards
armadillo repeat containing 24710.8690.3618Yes
6HDAC2HDAC2
StanfordSource,  GeneCards
histone deacetylase 25290.8400.4085Yes
7WASF1WASF1
StanfordSource,  GeneCards
WAS protein family, member 16030.8110.4518Yes
8CDK11CDK11
StanfordSource,  GeneCards
cyclin-dependent kinase (CDC2-like) 116330.8000.4989Yes
9SEC63SEC63
StanfordSource,  GeneCards
SEC63-like (S. cerevisiae)10190.6720.5024Yes
10FOXO3AFOXO3A
StanfordSource,  GeneCards
forkhead box O3A13570.5970.5060Yes
11PRDM1PRDM1
StanfordSource,  GeneCards
PR domain containing 1, with ZNF domain16210.5430.5136Yes
12CD164CD164
StanfordSource,  GeneCards
CD164 antigen, sialomucin16310.5410.5465Yes
13CCNCCCNC
StanfordSource,  GeneCards
cyclin C16550.5360.5777Yes
14NR2E1NR2E1
StanfordSource,  GeneCards
nuclear receptor subfamily 2, group E, member 118570.4980.5887Yes
15AIM1AIM1
StanfordSource,  GeneCards
absent in melanoma 118580.4980.6198Yes
16FYNFYN
StanfordSource,  GeneCards
FYN oncogene related to SRC, FGR, YES19620.4800.6394Yes
17ZBTB24ZBTB24
StanfordSource,  GeneCards
zinc finger and BTB domain containing 2420140.4720.6638Yes
18KIAA0274KIAA0274
StanfordSource,  GeneCards
KIAA027436890.2190.5105No
19PREPPREP
StanfordSource,  GeneCards
prolyl endopeptidase36940.2180.5237No
20WISP3WISP3
StanfordSource,  GeneCards
WNT1 inducible signaling pathway protein 339000.1940.5153No
21DDODDO
StanfordSource,  GeneCards
D-aspartate oxidase45630.1080.4561No
22SNX3SNX3
StanfordSource,  GeneCards
sorting nexin 347640.0840.4414No
23LAMA4LAMA4
StanfordSource,  GeneCards
laminin, alpha 450300.0520.4182No
24KIAA1919KIAA1919
StanfordSource,  GeneCards
KIAA19195674-0.0260.3557No
25CDC40CDC40
StanfordSource,  GeneCards
cell division cycle 40 homolog (yeast)6150-0.0830.3135No
26AMD1AMD1
StanfordSource,  GeneCards
adenosylmethionine decarboxylase 16539-0.1260.2826No
27SMPD2SMPD2
StanfordSource,  GeneCards
sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)6857-0.1630.2612No
28APG5LAPG5L
StanfordSource,  GeneCards
APG5 autophagy 5-like (S. cerevisiae)7179-0.1970.2415No
29GJA1GJA1
StanfordSource,  GeneCards
gap junction protein, alpha 1, 43kDa (connexin 43)7285-0.2070.2439No
30GPR6GPR6
StanfordSource,  GeneCards
G protein-coupled receptor 67386-0.2180.2475No
31MARCKSMARCKS
StanfordSource,  GeneCards
myristoylated alanine-rich protein kinase C substrate7995-0.2980.2055No
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Leukemia_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for chr6q21   
Histogram of random enrichment scores (real ES = 0.6638114 )