DatasetLeukemia_collapsed.gct
PhenotypeAML
GeneSetC1.symbols.gmt#chr2p13
Enrichment Score (ES)-0.30221254
Normalized Enrichment Score (NES)-0.9976464
Nominal p-value0.4567219
FDR q-value1.0
FWER p-Value0.998
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1TIA1TIA1
StanfordSource,  GeneCards
TIA1 cytotoxic granule-associated RNA binding protein1001.1950.0753No
2STAMBPSTAMBP
StanfordSource,  GeneCards
STAM binding protein1611.0960.1476No
3EMX1EMX1
StanfordSource,  GeneCards
empty spiracles homolog 1 (Drosophila)10010.6750.1121No
4DGUOKDGUOK
StanfordSource,  GeneCards
deoxyguanosine kinase13030.6110.1257No
5PCBP1PCBP1
StanfordSource,  GeneCards
poly(rC) binding protein 114580.5760.1515No
6DUSP11DUSP11
StanfordSource,  GeneCards
dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)21980.4400.1091No
7ARHGAP25ARHGAP25
StanfordSource,  GeneCards
Rho GTPase activating protein 2522540.4310.1344No
8MPHOSPH10MPHOSPH10
StanfordSource,  GeneCards
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)23100.4220.1591No
9CCT7CCT7
StanfordSource,  GeneCards
chaperonin containing TCP1, subunit 7 (eta)42880.144-0.0279No
10ALMS1ALMS1
StanfordSource,  GeneCards
Alstrom syndrome 145150.114-0.0423No
11EGR4EGR4
StanfordSource,  GeneCards
early growth response 452660.024-0.1154No
12ANXA4ANXA4
StanfordSource,  GeneCards
annexin A453120.019-0.1185No
13DCTN1DCTN1
StanfordSource,  GeneCards
dynactin 1 (p150, glued homolog, Drosophila)5754-0.036-0.1600No
14WBP1WBP1
StanfordSource,  GeneCards
WW domain binding protein 16029-0.069-0.1824No
15GFPT1GFPT1
StanfordSource,  GeneCards
glutamine-fructose-6-phosphate transaminase 16233-0.092-0.1961No
16PRSS25PRSS25
StanfordSource,  GeneCards
protease, serine, 256712-0.146-0.2334No
17MADMAD
StanfordSource,  GeneCards
MAX dimerization protein 17064-0.186-0.2551No
18MTHFD2MTHFD2
StanfordSource,  GeneCards
methylene tetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase7537-0.236-0.2854Yes
19TEX261TEX261
StanfordSource,  GeneCards
testis expressed gene 2617548-0.238-0.2694Yes
20SEMA4FSEMA4F
StanfordSource,  GeneCards
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F7797-0.270-0.2748Yes
21ANTXR1ANTXR1
StanfordSource,  GeneCards
anthrax toxin receptor 17810-0.272-0.2566Yes
22AAK1AAK1
StanfordSource,  GeneCards
AP2 associated kinase 17909-0.286-0.2460Yes
23SPRSPR
StanfordSource,  GeneCards
sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)7930-0.290-0.2273Yes
24SMYD5SMYD5
StanfordSource,  GeneCards
SMYD family member 58156-0.322-0.2267Yes
25HK2HK2
StanfordSource,  GeneCards
hexokinase 28211-0.330-0.2085Yes
26NAT8NAT8
StanfordSource,  GeneCards
N-acetyltransferase 8 (camello like)8575-0.399-0.2163Yes
27SEC15L2SEC15L2
StanfordSource,  GeneCards
SEC15-like 2 (S. cerevisiae)8675-0.423-0.1960Yes
28TLX2TLX2
StanfordSource,  GeneCards
T-cell leukemia, homeobox 29655-0.690-0.2444Yes
29BMP10BMP10
StanfordSource,  GeneCards
bone morphogenetic protein 109701-0.708-0.1984Yes
30ADD2ADD2
StanfordSource,  GeneCards
adducin 2 (beta)9748-0.730-0.1508Yes
31DOK1DOK1
StanfordSource,  GeneCards
docking protein 1, 62kDa (downstream of tyrosine kinase 1)9829-0.792-0.1023Yes
32ATP6V1B1ATP6V1B1
StanfordSource,  GeneCards
ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B, isoform 1 (Renal tubular acidosis with deafness)9918-0.858-0.0497Yes
33PLEKPLEK
StanfordSource,  GeneCards
pleckstrin9942-0.8870.0113Yes
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Leukemia_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for chr2p13   
Histogram of random enrichment scores (real ES = -0.30221254 )