DatasetLeukemia_collapsed.gct
PhenotypeALL
GeneSetC1.symbols.gmt#chr1q42
Enrichment Score (ES)0.4882626
Normalized Enrichment Score (NES)1.6743091
Nominal p-value0.032608695
FDR q-value0.19049485
FWER p-Value0.481
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1NVLNVL
StanfordSource,  GeneCards
nuclear VCP-like511.3250.0845Yes
2PARP1PARP1
StanfordSource,  GeneCards
poly (ADP-ribose) polymerase family, member 12331.0220.1356Yes
3SRP9SRP9
StanfordSource,  GeneCards
signal recognition particle 9kDa2910.9640.1951Yes
4NUP133NUP133
StanfordSource,  GeneCards
nucleoporin 133kDa3870.9140.2474Yes
5LBRLBR
StanfordSource,  GeneCards
lamin B receptor5930.8150.2821Yes
6TAF5LTAF5L
StanfordSource,  GeneCards
TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa7380.7660.3195Yes
7TSNAXTSNAX
StanfordSource,  GeneCards
translin-associated factor X8350.7300.3593Yes
8COG2COG2
StanfordSource,  GeneCards
component of oligomeric golgi complex 28760.7140.4036Yes
9GNPATGNPAT
StanfordSource,  GeneCards
glyceronephosphate O-acyltransferase8920.7090.4501Yes
10GGPS1GGPS1
StanfordSource,  GeneCards
geranylgeranyl diphosphate synthase 110780.6570.4761Yes
11TBCETBCE
StanfordSource,  GeneCards
tubulin-specific chaperone e13610.5970.4883Yes
12TARBP1TARBP1
StanfordSource,  GeneCards
TAR (HIV) RNA binding protein 119030.4890.4674No
13KIAA0133KIAA0133
StanfordSource,  GeneCards
KIAA0133 gene product29600.3210.3837No
14TOMM20TOMM20
StanfordSource,  GeneCards
translocase of outer mitochondrial membrane 20 homolog (yeast)33460.2670.3634No
15ITPKBITPKB
StanfordSource,  GeneCards
inositol 1,4,5-trisphosphate 3-kinase B37160.2140.3410No
16TM7SF1TM7SF1
StanfordSource,  GeneCards
transmembrane 7 superfamily member 1 (upregulated in kidney)41300.1660.3110No
17RAB4ARAB4A
StanfordSource,  GeneCards
RAB4A, member RAS oncogene family48080.0790.2489No
18AGTAGT
StanfordSource,  GeneCards
angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8)50860.0460.2244No
19ACBD3ACBD3
StanfordSource,  GeneCards
acyl-Coenzyme A binding domain containing 351070.0440.2253No
20DISC1DISC1
StanfordSource,  GeneCards
disrupted in schizophrenia 154240.0040.1941No
21TP53BP2TP53BP2
StanfordSource,  GeneCards
tumor protein p53 binding protein, 25902-0.0550.1502No
22PSEN2PSEN2
StanfordSource,  GeneCards
presenilin 2 (Alzheimer disease 4)5912-0.0560.1531No
23CDC42BPACDC42BPA
StanfordSource,  GeneCards
CDC42 binding protein kinase alpha (DMPK-like)6840-0.1610.0715No
24ABCB10ABCB10
StanfordSource,  GeneCards
ATP-binding cassette, sub-family B (MDR/TAP), member 106982-0.1770.0694No
25GUK1GUK1
StanfordSource,  GeneCards
guanylate kinase 16988-0.1780.0810No
26EPHX1EPHX1
StanfordSource,  GeneCards
epoxide hydrolase 1, microsomal (xenobiotic)7932-0.2900.0065No
27CAPN9CAPN9
StanfordSource,  GeneCards
calpain 9 (nCL-4)8507-0.386-0.0247No
28NIDNID
StanfordSource,  GeneCards
nidogen (enactin)8635-0.412-0.0095No
29CAPN2CAPN2
StanfordSource,  GeneCards
calpain 2, (m/II) large subunit8974-0.482-0.0106No
30KCNK1KCNK1
StanfordSource,  GeneCards
potassium channel, subfamily K, member 19173-0.5270.0053No
31GALNT2GALNT2
StanfordSource,  GeneCards
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)9323-0.5650.0286No
32GNG4GNG4
StanfordSource,  GeneCards
guanine nucleotide binding protein (G protein), gamma 49560-0.6550.0494No
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Leukemia_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for chr1q42   
Histogram of random enrichment scores (real ES = 0.4882626 )