DatasetDiabetes_collapsed.gct
PhenotypeDMT
GeneSetC2.symbols.gmt#GLYCOGEN
Enrichment Score (ES)-0.41763797
Normalized Enrichment Score (NES)-1.3255057
Nominal p-value0.110707805
FDR q-value1.0
FWER p-Value0.998
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1PPP1CCPPP1CC
StanfordSource,  GeneCards
protein phosphatase 1, catalytic subunit, gamma isoform5620.3170.0625No
2PHKA2PHKA2
StanfordSource,  GeneCards
phosphorylase kinase, alpha 2 (liver)7060.2990.1474No
3GAAGAA
StanfordSource,  GeneCards
glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II)15380.2310.1650No
4PPP1CAPPP1CA
StanfordSource,  GeneCards
protein phosphatase 1, catalytic subunit, alpha isoform49530.088-0.0343No
5GYG2GYG2
StanfordSource,  GeneCards
glycogenin 266250.038-0.1334No
6GSK3BGSK3B
StanfordSource,  GeneCards
glycogen synthase kinase 3 beta8367-0.011-0.2457No
7GYS2GYS2
StanfordSource,  GeneCards
glycogen synthase 2 (liver)8529-0.016-0.2515No
8GBE1GBE1
StanfordSource,  GeneCards
glucan (1,4-alpha-), branching enzyme 1 (glycogen branching enzyme, Andersen disease, glycogen storage disease type IV)9332-0.040-0.2922No
9PPP1R3APPP1R3A
StanfordSource,  GeneCards
protein phosphatase 1, regulatory (inhibitor) subunit 3A (glycogen and sarcoplasmic reticulum binding subunit, skeletal muscle)9374-0.041-0.2821No
10PPP1R2PPP1R2
StanfordSource,  GeneCards
protein phosphatase 1, regulatory (inhibitor) subunit 210040-0.062-0.3067No
11GCKRGCKR
StanfordSource,  GeneCards
glucokinase (hexokinase 4) regulatory protein11709-0.121-0.3795Yes
12PYGLPYGL
StanfordSource,  GeneCards
phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI)12152-0.140-0.3648Yes
13AGLAGL
StanfordSource,  GeneCards
amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (glycogen debranching enzyme, glycogen storage disease type III)12197-0.143-0.3228Yes
14GYGGYG
StanfordSource,  GeneCards
glycogenin12787-0.171-0.3080Yes
15PYGMPYGM
StanfordSource,  GeneCards
phosphorylase, glycogen; muscle (McArdle syndrome, glycogen storage disease type V)12918-0.180-0.2601Yes
16KIAA1026KIAA1026
StanfordSource,  GeneCards
KIAA1026 protein13257-0.200-0.2196Yes
17SLC37A4SLC37A4
StanfordSource,  GeneCards
solute carrier family 37 (glycerol-6-phosphate transporter), member 413723-0.233-0.1772Yes
18GYS1GYS1
StanfordSource,  GeneCards
glycogen synthase 1 (muscle)13784-0.237-0.1066Yes
19PPP1CBPPP1CB
StanfordSource,  GeneCards
protein phosphatase 1, catalytic subunit, beta isoform13855-0.243-0.0346Yes
20G6PCG6PC
StanfordSource,  GeneCards
glucose-6-phosphatase, catalytic (glycogen storage disease type I, von Gierke disease)14736-0.3630.0212Yes
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Diabetes_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for GLYCOGEN   
Histogram of random enrichment scores (real ES = -0.41763797 )