DatasetDiabetes_collapsed.gct
PhenotypeNGT
GeneSetC2.symbols.gmt#ANDROGEN_UP_GENES
Enrichment Score (ES)0.32930508
Normalized Enrichment Score (NES)1.1961359
Nominal p-value0.20034543
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1PHYHPHYH
StanfordSource,  GeneCards
phytanoyl-CoA hydroxylase (Refsum disease)3400.3590.0186Yes
2ANKHANKH
StanfordSource,  GeneCards
ankylosis, progressive homolog (mouse)6250.3090.0351Yes
3DNAJB9DNAJB9
StanfordSource,  GeneCards
DnaJ (Hsp40) homolog, subfamily B, member 96480.3070.0689Yes
4DCTN3DCTN3
StanfordSource,  GeneCards
dynactin 3 (p22)8030.2910.0920Yes
5AKAP12AKAP12
StanfordSource,  GeneCards
A kinase (PRKA) anchor protein (gravin) 128740.2840.1199Yes
6MERTKMERTK
StanfordSource,  GeneCards
c-mer proto-oncogene tyrosine kinase11160.2630.1340Yes
7SLC26A2SLC26A2
StanfordSource,  GeneCards
solute carrier family 26 (sulfate transporter), member 211930.2570.1584Yes
8APPBP2APPBP2
StanfordSource,  GeneCards
amyloid beta precursor protein (cytoplasmic tail) binding protein 212500.2520.1836Yes
9CAMKK2CAMKK2
StanfordSource,  GeneCards
calcium/calmodulin-dependent protein kinase kinase 2, beta14370.2390.1986Yes
10ID2ID2
StanfordSource,  GeneCards
inhibitor of DNA binding 2, dominant negative helix-loop-helix protein14560.2370.2246Yes
11GSRGSR
StanfordSource,  GeneCards
glutathione reductase17450.2180.2304Yes
12LIFRLIFR
StanfordSource,  GeneCards
leukemia inhibitory factor receptor18380.2120.2486Yes
13SCDSCD
StanfordSource,  GeneCards
stearoyl-CoA desaturase (delta-9-desaturase)19180.2080.2673Yes
14TPD52TPD52
StanfordSource,  GeneCards
tumor protein D5221280.1960.2758Yes
15SEPP1SEPP1
StanfordSource,  GeneCards
selenoprotein P, plasma, 124010.1830.2788Yes
16SATSAT
StanfordSource,  GeneCards
spermidine/spermine N1-acetyltransferase24950.1790.2931Yes
17CPDCPD
StanfordSource,  GeneCards
carboxypeptidase D26540.1710.3022Yes
18RBM10RBM10
StanfordSource,  GeneCards
RNA binding motif protein 1027930.1650.3120Yes
19UAP1UAP1
StanfordSource,  GeneCards
UDP-N-acteylglucosamine pyrophosphorylase 131260.1510.3072Yes
20ORM2ORM2
StanfordSource,  GeneCards
orosomucoid 236810.1290.2851Yes
21IDI1IDI1
StanfordSource,  GeneCards
isopentenyl-diphosphate delta isomerase36840.1290.2997Yes
22AZGP1AZGP1
StanfordSource,  GeneCards
alpha-2-glycoprotein 1, zinc39100.1210.2986Yes
23B2MB2M
StanfordSource,  GeneCards
beta-2-microglobulin39370.1200.3107Yes
24SRP19SRP19
StanfordSource,  GeneCards
signal recognition particle 19kDa39830.1190.3213Yes
25TMEPAITMEPAI
StanfordSource,  GeneCards
transmembrane, prostate androgen induced RNA40650.1160.3293Yes
26KLF4KLF4
StanfordSource,  GeneCards
Kruppel-like factor 4 (gut)44820.1020.3132No
27UGDHUGDH
StanfordSource,  GeneCards
UDP-glucose dehydrogenase46170.0980.3155No
28HMGCS1HMGCS1
StanfordSource,  GeneCards
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble)51480.0810.2895No
29SNAP25SNAP25
StanfordSource,  GeneCards
synaptosomal-associated protein, 25kDa51780.0800.2968No
30DBIDBI
StanfordSource,  GeneCards
diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein)52910.0770.2981No
31HERC3HERC3
StanfordSource,  GeneCards
hect domain and RLD 354720.0710.2943No
32ABCC4ABCC4
StanfordSource,  GeneCards
ATP-binding cassette, sub-family C (CFTR/MRP), member 455390.0700.2979No
33SMSSMS
StanfordSource,  GeneCards
spermine synthase56990.0650.2948No
34ALDH1A3ALDH1A3
StanfordSource,  GeneCards
aldehyde dehydrogenase 1 family, member A370340.0270.2090No
35KLK2KLK2
StanfordSource,  GeneCards
kallikrein 2, prostatic77800.0060.1599No
36ELL2ELL2
StanfordSource,  GeneCards
elongation factor, RNA polymerase II, 278240.0040.1576No
37KLK3KLK3
StanfordSource,  GeneCards
kallikrein 3, (prostate specific antigen)79590.0010.1487No
38H1F0H1F0
StanfordSource,  GeneCards
H1 histone family, member 08334-0.0100.1250No
39HPGDHPGD
StanfordSource,  GeneCards
hydroxyprostaglandin dehydrogenase 15-(NAD)8826-0.0240.0950No
40DHCR24DHCR24
StanfordSource,  GeneCards
24-dehydrocholesterol reductase9548-0.0460.0522No
41ACTN1ACTN1
StanfordSource,  GeneCards
actinin, alpha 19893-0.0570.0358No
42SGKSGK
StanfordSource,  GeneCards
serum/glucocorticoid regulated kinase10137-0.0650.0271No
43SORDSORD
StanfordSource,  GeneCards
sorbitol dehydrogenase10510-0.0790.0113No
44MAFMAF
StanfordSource,  GeneCards
v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)10651-0.0830.0115No
45GUCY1A3GUCY1A3
StanfordSource,  GeneCards
guanylate cyclase 1, soluble, alpha 310662-0.0830.0204No
46IQGAP2IQGAP2
StanfordSource,  GeneCards
IQ motif containing GTPase activating protein 210672-0.0840.0294No
47ITGAVITGAV
StanfordSource,  GeneCards
integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)11423-0.110-0.0080No
48ADRM1ADRM1
StanfordSource,  GeneCards
adhesion regulating molecule 111546-0.115-0.0030No
49B4GALT1B4GALT1
StanfordSource,  GeneCards
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 111655-0.1190.0035No
50SEC24DSEC24D
StanfordSource,  GeneCards
SEC24 related gene family, member D (S. cerevisiae)12070-0.136-0.0085No
51KRT19KRT19
StanfordSource,  GeneCards
keratin 1912125-0.1380.0038No
52INPP4BINPP4B
StanfordSource,  GeneCards
inositol polyphosphate-4-phosphatase, type II, 105kDa12145-0.1400.0185No
53TMPRSS2TMPRSS2
StanfordSource,  GeneCards
transmembrane protease, serine 212280-0.1460.0264No
54PPAP2APPAP2A
StanfordSource,  GeneCards
phosphatidic acid phosphatase type 2A12421-0.1520.0345No
55NDRG1NDRG1
StanfordSource,  GeneCards
N-myc downstream regulated gene 112619-0.1620.0400No
56LMAN1LMAN1
StanfordSource,  GeneCards
lectin, mannose-binding, 112892-0.1780.0423No
57LIMLIM
StanfordSource,  GeneCards
LIM protein (similar to rat protein kinase C-binding enigma)13417-0.2110.0315No
58VAPAVAPA
StanfordSource,  GeneCards
VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa13513-0.2170.0500No
59PTPN21PTPN21
StanfordSource,  GeneCards
protein tyrosine phosphatase, non-receptor type 2113643-0.2250.0673No
60FKBP5FKBP5
StanfordSource,  GeneCards
FK506 binding protein 513736-0.2330.0880No
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Diabetes_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for ANDROGEN_UP_GENES   
Histogram of random enrichment scores (real ES = 0.32930508 )