CodAlignView
NC_045512_SARS_CoV_2_Wuhan_Hu_1_aa M S D N G P Q N Q R N A P R I T F G G P S D S T G S N Q N G E R S G A R S K Q R R P Q G L P N N T A S W F T A L T Q H G K E D L K F P R G Q G V P I N T N S S P D D Q I G Y Y R R A T R R I R G G D G K M K D L S P R W Y F Y Y L G T G P E A G L P Y G A N K D G I I W V A T E G A L N T P K D H I G T R N P A N N A A I V L Q L P Q G T T L P K G F Y A E G S R G G S Q A S S R S S S R S R N S S R N S T P G S S R G T S P A R M A G N G G D A A L A L L L L D R L N Q L E S K M S G K G Q Q Q Q G Q T V T K K S A A E A S K K P R Q K R T A T K A Y N V T Q A F G R R G P E Q T Q G N F G D Q E L I R Q G T D Y K H W P Q I A Q F A P S A S A F F G M S R I G M E V T P S G T W L T Y T G A I K L D D K D P N F K D Q V I L L N K H I D A Y K T F P P T E P K K D K K K K A D E T Q A L P Q R Q K K Q Q T V T L L P A A D L D D F S K Q L Q Q S M S S A D S T Q A *
NC_045512_SARS_CoV_2_Wuhan_Hu_1 ATG TCT GAT AAT GGA CCC CA---A AAT CAG CGA AAT GCA CCC CGC ATT ACG TTT GGT GGA CCC TCA GAT TCA ACT GGC AGT AAC CAG AAT GGA GAA CGC AGT GGG GCG CGA TCA AAA CAA CGT CGG CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACC GCT CTC ACT CAA CAT GGC AAG GAA GAC CTT AAA TTC CCT CGA GGA CAA GGC GTT CCA ATT AAC ACC AAT AGC AGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC AGA CGA ATT CGT GGT GGT GAC GGT AAA ATG AAA GAT CTC AGT CCA AGA TGG TAT TTC TAC TAC CTA GGA ACT GGG CCA GAA GCT GGA CTT CCC TAT GGT GCT AAC AAA GAC GGC ATC ATA TGG GTT GCA ACT GAG GGA GCC TTG AAT ACA CCA AAA GAT CAC ATT GGC ACC CGC AAT CCT GCT AAC AAT GCT GCA ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGT TCC TCA TCA CGT AGT CGC AAC AGT TCA AGA AAT TCA ACT CCA GGC AGC AGT AGG GGA ACT TCT CCT GCT AGA ATG GCT GGC AAT GGC GGT GAT GCT GCT CTT GCT TTG CTG CTG CTT GAC AGA TTG AAC CAG CTT GAG AGC AAA ATG TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCT TCT AAG AAG CCT CGG CAA AAA CGT ACT GCC ACT AAA GCA TAC AAT GTA ACA CAA GCT TTC GGC AGA CGT GGT CCA GAA CAA ACC CAA GGA AAT TTT GGG GAC CAG GAA CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCC CCC AGC GCT TCA GCG TTC TTC GGA ATG TCG CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACG TGG TTG ACC TAC ACA GGT GCC ATC AAA TTG GAT GAC AAA GAT CCA AAT TTC AAA GAT CAA GTC ATT TTG CTG AAT AAG CAT ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAG AAG GCT GAT GAA ACT CAA GCC TTA CCG CAG AGA CAG AAG AAA CAG CAA ACT GTG ACT CTT CTT CCT GCT GCA GAT TTG GAT GAT TTC TCC AAA CAA TTG CAA CAA TCC ATG AGC AG------T GCT GAC TCA ACT CAG GCC TAA
MN996532_Bat_CoV_RaTG13 ATG TCT GAT AAT GGA CCC CA---A AAC CAA CGA AAT GCA CCC CGC ATT ACG TTT GGT GGA CCC TCA GAT TCA ACT GGC AGT AAC CAG AAT GGA GAA CGC AGT GGA GCA CGA CCA AAA CAA CGT CGG CCT CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACC GCT CTC ACT CAA CAT GGC AAG GAA GAC CTT AAA TTC CCT CGA GGA CAA GGC GTT CCG ATT AAT ACC AAT AGC AGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC AGA CGA ATT CGT GGT GGT GAC GGT AAA ATG AAA GAT CTC AGT CCA AGA TGG TAC TTT TAC TAC CTA GGA ACT GGG CCA GAA GCT GGA CTT CCC TAT GGT GCT AAC AAA GAC GGC ATC ATA TGG GTT GCA ACT GAG GGA GCC TTG AAT ACA CCA AAA GAT CAC ATT GGC ACC CGC AAT CCT GCT AAC AAT GCT GCA ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGT GGC AGT CAA GCT TCT TCT CGC TCT TCA TCA CGT AGT CGC AAC AGT TCA AGA AAC TCA ACT CCA GGC AGC AGT AGG GGA ACT TCC CCT GCT AGG ATG GCT GGC AAT GGC AGT GAT GCT GCT CTT GCT TTG CTG CTG CTT GAC AGA TTG AAC CAG CTT GAG AGC AAA ATG TCT GGT AAA GGC CAA CAA CAA CAG AGC CAA ACT GTC ACT AAG AAA TCT GCT GCA GAG GCT TCT AAG AAA CCT CGG CAA AAA CGT ACT GCC ACC AAA CAA TAC AAT GTA ACA CAA GCT TTT GGC AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTT GGG GAT CAA GAA CTA ATC AGG CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTC GCT CCC AGC GCT TCA GCA TTC TTC GGA ATG TCG CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACG TGG TTG ACC TAT ACA GGT GCC ATT AAA TTG GAT GAC AAA GAT CCA AAT TTC AAA GAT CAA GTC ATT TTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG GCT GAT GAA ACT CAA GCC TTA CCG CAG AGA CAG AAG AAA CAG CAA ACT GTG ACT CTT CTT CCT GCT GCA GAT TTG GAT GAC TTC TCC AAA CAA TTG CAA CAA TCC ATG AGC AG------T GCT GAT TCA ACT CAG GCC TAA
MG772933_Bat_SARS_like_CoV_bat_SL_CoVZC45 ATG TCT GAT AAT GGA CCC CA---A AAC CAA CGT AGT GCA CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA AGT GAC AAT AGC AAA AAC GGA GAG CGC AAT GGT GCA CGA CCT AAA CAA CGT CGA CCC CAA GGC TTA CCC AAT AAT ACT GCA TCT TGG TTC ACC GCT CTC ACT CAA CAT GGC AAG GAA AAC CTT ACG TTC CCT CGA GGG CAA GGT GTT CCA ATC AAC ACC AAT AGC TCT AAA GAT GAC CAA ATT GGC TAC TAC CGT AGA GCT ACC AGA CGA ATT CGT GGT GGT GAC GGT AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTT TAC TAT CTA GGA ACT GGA CCA GAA GCT GGA CTT CCC TAT GGT GCT AAC AAA GAA GGC ATC ATA TGG GTT GCA ACT GAG GGA GCC TTA AAC ACA CCG AAA GAC CAC ATT GGC ACC CGC AAT CCT GCT AAC AAT GCT GCA ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCT TCT TCA CGC TCC TCA TCA CGT AGT CGC AAC AGT TCA AGA AAC TCA ACT CCA GGC AGC AGT AGG GGA ACT TCT CCT GCT AGA ATG GCT GGC AAT GGC GGT GAC ACT GCT CTT GCT TTG CTG CTG CTA GAT AGG TTG AAC CAG CTT GAG AAC AAA GTA TCT GGC AAA GGC CAA CAA CAA CAG GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAT TTT GGG GAC CAA GAA TTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTT GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAT AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG GCT GAT GAA CTT CAG GCT TTA CCG CAG AGA CAG AAG AAA CAA CAA ACT GTG ACC CTT CTT CCT GCT GCA GAT TTG GAT GAA TTC TCC AAA CAG TTG CAA CAA TCC ATG AGT GG------T ACT GAT TCA ACC CAG GCT TAA
MG772934_Bat_SARS_like_CoV_bat_SL_CoVZXC21 ATG TCT GAT AAT GGA CCC CA---A AAC CAG AGT AGT GCA CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA AGT GAC AAT AGC CAA AAC GGA GAG CGC AAT GGT GCA CGA CCT AAA CAA CGT CGA CCC CAA GGC TTA CCC AAT AAT ACT GCA TCT TGG TTC ACC GCT CTC ACT CAA CAT GGC AAG GAA AAC CTT ACG TTC CCT CGA GGG CAA GGT GTT CCA ATT AAC ACC AAT AGC TCT AAA GAT GAC CAA ATT GGC TAC TAC CGT AGA GCT ACC AGA CGA ATT CGT GGC GGT GAC GGT AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTT TAC TAT CTG GGA ACT GGA CCA GAA GCT GGA CTT CCC TAT GGT GCT AAC AAA GAA GGC ATC ATA TGG GTT GCA ACT GAG GGA GCC TTA AAC ACA CCA AAA GAC CAC ATT GGC ACC CGC AAT CCT GCT AAC AAT GCT GCA ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCT TCT TCA CGC TCC TCA TCA CGT AGT CGC AAC AGT TCA AGA AAC TCA ACT CCA GGC AGC AGT AGG GGA ACT TCT CCT GCT AGA ATG GCT GGC AAT GGC GGT GAC ACT GCT CTT GCT TTG CTG CTG CTA GAT AGG TTG AAC CAG CTT GAG AAC AAG ATA TCT GGC AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCC ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAT TTC GGG GAC CAA GAA TTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTT GGA ATG TCT CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG GCT GAT GAA CTT CAG GCT TTA CCG CAG AGA CAG AAG AAG CAA CAA ACT GTG ACT CTT CTT CCT GCT GCA GAT TTG GAT GAA TTC TCC AAA CAG TTG CAA CAA TCC ATG AGT GG------T ACT GAT TCA ACC CAG GCT TAA
NC_004718_SARS_CoV ATG TCT GAT AAT GGA CCC CAATCA AAC CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTT GCA ACT GAG GGA GCC TTG AAT ACA CCC AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGA AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCC ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAT TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTT GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTG CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KT444582_SARS_like_CoV_WIV16 ATG TCT GAT AAT GGA CCC CAACCA AAT CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ATT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTT TAT TAC CTA GGA ACC GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAA GAT CAC ATC GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCG TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAT AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417146_Bat_SARS_like_CoV_Rs4231 ATG TCT GAT AAT GGA CCC CAACCA AAT CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA CGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC ATA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAA GAT CAC ATC GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCG TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAT AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
MK211376_CoV_BtRs_BetaCoV_YN2018B ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAG GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA CTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCT TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAT CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA CTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417151_Bat_SARS_like_CoV_Rs7327 ATG TCT GAT AAT GGA CCC CAACCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAA GAT CAC ATC GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGG CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCG AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AGC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417152_Bat_SARS_like_CoV_Rs9401 ATG TCT GAT AAT GGA CCC CAACCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAA GAT CAC ATC GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA CTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCT TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAT CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA CTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417144_Bat_SARS_like_CoV_Rs4084 ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCG AAA CAG CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGT GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCC AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCG TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AGC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAT AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CTT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KF367457_Bat_SARS_like_CoV_WIV1 ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCC AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAT GCA GAG GGG AGC AGA GGT GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AGA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCT TTT GGG AGA CGT GGT CCA GAA CAA ACT CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCG TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA TTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAA CCC ACT GTG ACT CTT CTC CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KU973692_UNVERIFIED_SARS_related_CoV_F46 ATG TCT GAT AAT GGA CCC CAACAA AAC CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA GCT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAG GAG CTC AGC CCC AGA TGG TAC TTC TAC TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCA AAA GAT CAC ATC GGC ACC CGC AAT CCT AAC AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGA AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA CTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG CGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAA TTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA ATG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CAC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417145_Bat_SARS_like_CoV_Rf4092 ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG TCG AAA CAG CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CTC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCC AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAT GCA GAG GGG AGC AGA GGT GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCT TTT GGG AGA CGC GGT CCA GAA CAA ACT CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCG TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA TTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AGT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KJ473816_BtRs_BetaCoV_YN2013 ATG TCT GAT AAT GGA CCC CAACCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAG CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAG GGC ATC GTA TGG GTT GCA ACT GAG GGA GCC TTG AAC ACA CCC AAA GAC CAC ATT GGC ACT CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGT CAA AAA CGT ACT GCC ACC AAG GTG TAT AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAT TTT GGG GAC CAA GAA CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCG AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAT AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAT AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG GGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY770858_Bat_CoV_Anlong_103 ATG TCT GAT AAT GGA CCC CAACCA AGC CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ATT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC TCT CGA GGC CAG GGC GTC CCT ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCT AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCG ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC --- CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGG CGT GGT CCA GAA CAA ACC CAA GGA AAC TTT GGG GAC CAA GAA CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCA TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAT AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA TTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ATT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417143_Bat_SARS_like_CoV_Rs4081 ATG TCT GAT AAT GGA CCC CAACCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT CCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTT TAT TAC CTA GGA ACC GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCT AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGC GAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAC TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGG CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCG AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417149_Bat_SARS_like_CoV_Rs4255 ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG ACA AGG CCG AAA CAG CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCC AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAT AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAC TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGG CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAC TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCG AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAT ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
MK211378_CoV_BtRs_BetaCoV_YN2018D ATG TCT GAT AAT GGA CCC CAACCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA CTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCT TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAT CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA CTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
FJ588686_Bat_SARS_CoV_Rs672_2006 ATG TCT GAT AAT GGA CCC CAACCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAG CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAC GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA CAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC CTG AAC ACA CCT AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAG GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC CGA TTA AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGG CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTT GGG ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
MK211377_CoV_BtRs_BetaCoV_YN2018C ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCT AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA TAT TGG CCG CAA ATT GCA CAA TTT GCT CCG AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417142_Bat_SARS_like_CoV_As6526 ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCG AAA CAG CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCC AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GTT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAC TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGG CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCG AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ATT GTG ACA CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417147_Bat_SARS_like_CoV_Rs4237 ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCT AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGT CAA AAA CGT ACT GCC ACC AAG GCG TAC AAC GTC ACT CAA GCA TTT GGG AGG CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTT AAA GAC AAT GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY417148_Bat_SARS_like_CoV_Rs4247 ATG TCT GAT AAT GGA CCC CAACCA AAT CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCA AGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAA GAT CAC ATC GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCG TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAT AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCT AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
MK211375_CoV_BtRs_BetaCoV_YN2018A ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAG CAA CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATT AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCT AAA GAT CAT ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ACG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCT TTT GGG AGA CGT GGT CCA GAA CAA ACC CAG GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
DQ071615_Bat_SARS_CoV_Rp3 ATG TCT GAT AAT GGA CCC CA---A AAC CAG CGT AGT GCT CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAC AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAA CGC CGA CCT CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGT AAG GAG GAA CTT AGA TTC CCT CGA GGT CAG GGT GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGT GCT AAC AAA GAA GGC ATC GTA TGG GTT GCA ACT GAG GGA GCC CTG AAT ACA CCA AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCA GCT CGA ATG GCT AGC GGA GGC GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAA CTT GAG AGC AAA GTT TCT GGT AGA AGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGT CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTT GGG GAC CAA GAA TTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAT AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ATA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACA GTG ACT CTT CTT CCT GCA GCT GAT ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KP886808_Bat_SARS_like_CoV_YNLF_31C ATG TCT GAT AAT GGA CCC CA---C AAC CAA CGT AGT GCT TCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG AAT GGA GGA CGC AAT GGG GCT AGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAG CTT AGA TTC CCT CAA GGC CAG GGT GTT CCA ATC AAC ACC AAT AGT GGT CCA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGT GCT AAC AAA GAA GGC ATC ATA TGG GTC GCA ACT GAG GGA GCC TTG AAC ACA CCT AAA GAC CAC ATT GGC ACC CGC AAC CCT AAT AAC AAT GCT GCT ACC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCC AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGT GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA ACT TCT CCT GCT CGA ATT GCT AGT GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAT GTC ACT CAA GCT TTT GGG AGA CGT GGT CCA GAC CAA ACC CAA GGA AAC TTC GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAT AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACC GTG ACT CTT CTT CCT GCG GCT GAT ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KJ473815_BtRs_BetaCoV_GX2013 ATG TCT GAT AAT GGA CCC CAATCA AAC CAG CGT AGT GCC CCC AGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAC TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAT AAA GAA GGC ATC GTA TGG GTC GCA ATT GAG GGA GCC TTG AAT ACA CCT AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGT GGC AGT CAA GCC TCA TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA AGA AAC TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA TTG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG TTG CTA GAC AGA CTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCT ACA AAA CAG TAC AAC GTC ACT CAG GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGG AAC TTT GGG GAC CAA GAC TTA ACC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATC AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAG AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTT TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KF569996_Rhinolophus_affinis_CoV_LYRa11 ATG TCT GAT AAT GGA CCC CAACAA AAT CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA GCT GAC AAT AAC CAG AAT GGA GAA CGC AGT GGG GCA AGG CCA AAA CAG CGC AGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT ACA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCA AAA GAC CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGA AGC AGA GGC GGC AGC CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACA CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTA GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAA AAA TCT GCT GCT GAG GCT TCT AAG AAG CCC CGT CAA AAA CGT ACT GCC ACC AAG GCG TAC AAT GTC ACT CAA GCA TTT GGG CGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTC GGG GAC CAA GAA TTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAT AAA GAT CCA CAA TTC AAA GAT AAC GTC ATA ATG CTT AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAG AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
JX993988_Bat_CoV_Cp_Yunnan2011 ATG TCT GAT AAT GGA CCC CAACAA AAC CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA GCT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCG CGG CCA AAA CAA CGC CGA CCT CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTT GCA ATT GAG GGA GCC TTG AAT ACA CCA AAA GAT CAC ATC GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGA AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGT GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTA GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAG ACT GTC ACT AAG AAA TCT GCC GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACT AAA CAG TAC AAC GTC ACC CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTT GGG GAC CAA GAG TTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATA AAA CTG GAT GAC AAA GAT CCA CAA TTT AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTC CCT GCG GCT GAT ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCC GCT GAT TCA ACT CAG GCA TAA
MK211374_CoV_BtRl_BetaCoV_SC2018 ATG TCT GAT AAT GGA CCC CA---A AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAG CAG CGC CGA CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AAA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAT GGT AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGT ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCT AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAG CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACT GCC ACA AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGG CGT GGT CCA GAA CAA ACC CAA GGA AAC TTT GGT GAC CAA GAA TTA ATC AGA CAA GGG ACT GAT TAC AAA CAT TGG CCA CAA ATT GCA CAA TTT GCT CCG AGT GCC TCT GCA TTT TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAT AAA GAT CCA CAA TTC AAA GAC AAC GTC ATG CTG TTG AAT AAG CAC ATT GAC GCA TAC AAA GCA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCT ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KJ473814_BtRs_BetaCoV_HuB2013 ATG TCT GAT AAT GGA CCC CA---A AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAA CGC CGT CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTT TGG GTC GCA ACT GAG GGA GCC TTA AAC ACA CCA AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAG GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCT TCC CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA CTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAA CGT ACG GCA ACT AAG TCG TAC AAC GTC ACT CAA GCT TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTT GGG GAC CAA GAA CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTT GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATA AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA TTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AG- --A AAG AAG CAG CCC ACT GTG ACT CTT CTG CCT GCG GCT GAT ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
DQ412043_Bat_SARS_CoV_Rm1 ATG TCT GAT AAT GGA CCC CA---A AAC CAG CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAA CGC CGT CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAC GGC GCT AAC AAA GAA GGC ATC GTT TGG GTC GCA ACT GAG GGA GCC TTA AAT ACA CCA AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCG AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA ATG GCT AGC GGA AGT GGT GAA ACT GCC CTT GCG CTA TTG CTG CTA GAC AGA CTC AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGT CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACG GCA ACC AAG TCG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGC GGT CCA GAA CAA ACC CAA GGA AAC TTT GGG GAC CAA GAC CTA ATC AGA CAA GGA ACT GAT TAC AAA TAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TTG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATA AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA TTG CTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AG- --A AAG AAG CAG CCC ACT GTG ACT CTT CTG CCT GCG GCT GAT ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCC GAT TCA ACT CAG GCA TAA
KY938558_Bat_CoV_strain_16BO133 ATG TCT GAT AAT GGA ACC CA---A AAC CAA CGT AGT GCC TCC CGC ATT ACA TTT GGT GGA CCT TCA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAA CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCA TCT TGG TTC ACA GCT CTC ACT CAG CAT GGT AAG GAA GGA CTC AAA TTC CCT CAA GGC CAG GGA GTT CCT ATC AAC ACC AAT AGT GGC AGA GAT GAC CAA ATT GGC TAC TAT AGA AGA GCC ACC CGA CGA GTT CGT GGT GGT GAC GGT AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGT GCC AAT AAA GAA GGC ATC GTA TGG GTT GCA ATT GAG GGT GCC TTG AAC ACA CCA AAA GAT CAT ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATT GTT CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCT GAA GGG AGC AGG AGT GGT AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGT GGA AAT TCA AGA ACT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA GTG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG TTA GAC AGA TTG AAC CAG CTG GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT TCA GAG GCA TCT AAA AAG CCT CGG CAA AAA CGT ACC GCA ACC AAA CAG TAC AAT GTC ACC CAA GCT TTT GGG CGA CGT GGT CCA GAT CAA ACT CAA GGA AAC TTT GGA GAC CAG GAG CTA ATC AGA CAA GGA ACT GAT TAT AAA CAC TGG CCG CAA ATA GCA CAG TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAT AAA GAT CCC CAA TTT AAA GAC AAC GTC ATA CTG CTG AAT AAG CAC ATT GAC GCA TAC AAG ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTG CCG CAG AG- --A AAG AAA CTG CCC ACT GTG ACT CTT CTG CCT GCG GCT GAT ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
DQ412042_Bat_SARS_CoV_Rf1 ATG TCT GAT AAT GGA CCC CA---A AAC CAA TGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAA CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGT AAG GAA GGA CTC AAA TTC CCT CAA GGC CAG GGA GTT CCT ATC AAC ACC AAT AGT GGC AGA GAT GAC CAA ATT GGC TAC TAC AGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGT AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGT GCC AAT AAA GAA GGC ATC GTA TGG GTT GCA ACT GAG GGT GCC TTG AAT ACA CCA AAA GAT CAT ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCT ATT GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGG AAT GGT AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGT GGA AAT TCA AGA ACT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA GTG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTG GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT ACT TCA GAG GCA TCT AAA AAG CCT CGA CAA AAA CGT ACT GCA ACC AAA CAG TAC AAT GTC ACC CAA GCC TTT GGG CGA CGT GGT CCA GAT CAA ACT CAA GGA AAC TTT GGA GAC CAG GAG TTA ATC AGA CAA GGA ACT GAT TAT AAA CAC TGG CCG CAA ATA GCA CAG TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT AGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ATT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCC CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAA CAG CCC ACT GTG ACT CTT CTT CCT GCG GCC GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
DQ648856_Bat_CoV_BtCoV_273_2005 ATG TCT GAT AAT GGA CCC CA---A AAC CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAA CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGT AAG GAA GGA CTC AAA TTC CCT CAA GGC CAG GGA GTT CCT ATC AAC ACC AAT AGT GGC AGA GAT GAC CAA ATT GGC TAC TAC AGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGT AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGT GCC AAT AAA GAA GGC ATC GTA TGG GTT GCA ACT GAG GGT GCC TTG AAT ACA CCA AAA GAT CAT ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCT ATT GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGG AAT GGT AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGT GGA AAT TCA AGA ACT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA GTG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG TTA GAC AGA TTG AAC CAG CTG GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT TCA GAG GCA TCT AAA AAG CCT CGA CAA AAA CGT ACT GCA ACC AAA CAG TAC AAT GTC ACC CAA GCT TTT GGG CGA CGT GGT CCA GAT CAA ACT CAA GGA AAC TTT GGA GAC CAG GAG TTA ATC AGA CAA GGA ACT GAT TAT AAA CAC TGG CCG CAA ATA GCA CAG TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT AGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCC CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAA CAG CCC ACT GTG ACT CTT CTT CCT GCG GCC GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KJ473812_BtRf_BetaCoV_HeB2013 ATG TCT GAT AAT GGA CCC CA---A AAC CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GTA CGG CCA AAA CAA CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGT AAG GAA GGA CTC AAA TTC CCT CAA GGC CAG GGA GTT CCT ATC AAC ACC AAT AGT GGC AGA GAC GAC CAA ATT GGC TAC TAC AGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGT AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGT GCC AAT AAA GAA GGC ATC GTA TGG GTT GCA ACT GAG GGT GCC TTG AAC ACA CCA AAA GAT CAT ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCT ATT GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGG AAT GGT AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGT GGA AAT TCA AGA ACT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA GTG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG TTA GAC AGA TTG AAC CAG CTG GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT TCA GAG GCA TCT AAA AAG CCT CGA CAA AAA CGT ACT GCA ACC AAA CAG TAT AAT GTC ACC CAA GCT TTT GGG CGA CGT GGT CCA GAT CAA ACT CAA GGA AAC TTT GGA GAC CAG GAG TTA ATC AGA CAA GGA ACT GAT TAT AAA CAC TGG CCG CAA ATA GCA CAG TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAC CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCC CAA TTC AAA GAC AAC GTC ATA CTG TTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAA CAG CCC ACT GTG ACT CTT CTT CCT GCG GCC GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
KY770860_Bat_CoV_Jiyuan_84 ATG TCT GAT AAT GGA CCC CA---A AAC CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GTA CGG CCA AAA CAA CGC CGA CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGT AAG GAA GGA CTC AAA TTC CCT CAA GGC CAG GGA GTT CCT ATC AAC ACC AAT AGT GGC AGA GAC GAC CAA ATT GGC TAC TAC AGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGT AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTT TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGT GCC AAT AAA GAA GGC ATC GTA TGG GTT GCA ACT GAG GGT GCC TTG AAC ACA CCA AAA GAT CAT ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCT ATT GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGG AAT GGT AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGT GGA AAT TCA AGA ACT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA GTG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG TTA GAC AGA TTG AAC CAG CTG GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT TCA GAG GCA TCT AAA AAG CCT CGA CAA AAA CGT ACT GCA ACC AAA CAG TAT AAT GTC ACC CAA GCT TTT GGG CGA CGT GGT CCA GAT CAA ACT CAA GGA AAC TTT GGA GAC CAG GAG TTA ATC AGA CAA GGA ACT GAT TAT AAA CAC TGG CCG CAA ATA GCA CAG TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAC CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCC CAA TTC AAA GAC AAC GTC ATA CTG TTG AAT AAG CAC ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAA CAG CCC ACT GTG ACT CTT CTT CCT GCG GCC GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
JX993987_Bat_CoV_Rp_Shaanxi2011 ATG TCT GAT AAT GGA CCC CA---A AAC CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC TCA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAA CGC CGT CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGT GCT AAC AAA GAA GGC ATC ATA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCA AAA GAT CAC ATC GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAA GGG AGC AGA GGC GGC AGT CAA GCC TCT TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAC TCC CCT GCT CGA ATG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAT AGA CTG AAC CAG CTA GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACT AAG AAA TCT GCT GCT GAG GCA TCC AAA AAG CCT CGC CAA AAG CGT ACG GCA ACT AAG TCG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAA CAA ACC CAA GGA AAC TTT GGG GAC CAA GAC TTA ATC AGA CAA GGA ACT GAT TAC AAA CAC TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTT GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATC AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAT AAG CAT ATT GAC GCA TAC AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AG- --A AAG AAG CAG CCC ACT GTG ACT CTT CTG CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA AAT TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
GQ153542_Bat_SARS_CoV_HKU3_7 ATG TCT GAT AAT GGA CCC CA---A GAC CAA CGT AGT GCT CCC CGC ATT ACA TTT GGT GGA CCC ACA GAT TCA ACT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAA CGC CGG CCC CAG GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAG GAG GAA CTT AGA TTT CCT CGA GGC CAG GGT GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAC TTT TAC TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGT GCT AAC AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGC GCC TTG AAC ACA CCT AAA GAT CAC ATT GGC ACC CGC AAT CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGC GGC AGT CAA GCC TCA TCT CGC TCT TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AAT TCT CCT GCT CGA TTG GCT AGC GGA GGC GGT GAA ACT GCC CTT GCG CTA TTG CTG CTA GAC AGA TTG AAC CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CAA GGC CAA ACT GTC ACC AAG AAA TCT GCT GCT GAG GCA TCT AAA AAG CCT CGC CAA AAA CGT ACT GCT ACT AAA CAG TAT AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAG CAA ACC CAA GGA AAC TTT GGG GAC CAA GAT CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACT TGG CTG ACT TAT CAT GGA GCC ATT AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAT AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAT AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAA CCT ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCT AGA CAA CTT CAA AAA TCC ATG AGT GGAGCTTCT GCT GAT TCA ACT CAG GCA TAA
DQ022305_Bat_SARS_CoV_HKU3_1 ATG TCT GAT AAT GGA CCC CA---A AGT CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC GCA GAT TCA AAT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGA CCA AAA CAA CGC CGG CCC CAA GGT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAA GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGC GCT AAT AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAA GAT CAC ATT GGC ACC CGC AAC CCT AAT AAC AAT GCT GCC ATC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGT GGC AGT CAA TCT TCA TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA AGA AAT TCA ACT CCT GGC AGC AGT AGG GGA AGT TCT CCT GCT CGA TTG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAT CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CCA GGC CAA ACC GTC ACT AAG AAA TCT GCT GCT GAG GCA TCG AAG AAG CCT CGC CAA AAA CGT ACT GCT ACT AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAG CAA ACC CAA GGA AAC TTT GGG GAC CAA GAA CTA ATC AGA CAA GGA ATT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATC AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAT AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA CAT TCC ATG AGT GGAGCTTCT GCT GAT TCT ACT CAG GCA TAA
GQ153547_Bat_SARS_CoV_HKU3_12 ATG TCT GAT AAT GGA CCC CA---A AGT CAA CGT AGT GCC CCC CGC ATT ACA TTT GGT GGA CCC GCA GAT TCA AAT GAC AAT AAC CAG GAT GGA GGA CGC AGT GGT GCA CGG CCA AAA CAG CGC CGG CCC CAA GCT TTA CCC AAT AAT ACT GCG TCT TGG TTC ACA GCT CTC ACT CAG CAT GGC AAA GAG GAA CTT AGA TTC CCT CGA GGC CAG GGC GTT CCA ATC AAC ACC AAT AGT GGT AAA GAT GAC CAA ATT GGC TAC TAC CGA AGA GCT ACC CGA CGA GTT CGT GGT GGT GAC GGC AAA ATG AAA GAG CTC AGC CCC AGA TGG TAT TTC TAT TAC CTA GGA ACT GGC CCA GAA GCT TCA CTT CCC TAT GGC GCT AAT AAA GAA GGC ATC GTA TGG GTC GCA ACT GAG GGA GCC TTG AAT ACA CCG AAA GAT CAC ATT GGC ACC CGC AAC CCT AAT AAC AAT GCT GCC GTC GTG CTA CAA CTT CCT CAA GGA ACA ACA TTG CCA AAA GGC TTC TAC GCA GAG GGG AGC AGA GGT GGC AGT CAA TCT TCA TCT CGC TCC TCA TCA CGT AGT CGC GGT AAT TCA ACA AAT TCA ACT CCT GGC AGC AGT AGG GGA AGT TCT CCT GCT CGA TTG GCT AGC GGA GGT GGT GAA ACT GCC CTC GCG CTA TTG CTG CTA GAC AGA TTG AAT CAG CTT GAG AGC AAA GTT TCT GGT AAA GGC CAA CAA CAA CCA GGC CAA ACC GTC ACT AAG AAA TCT GCT GCT GAG GCA TCG AAG AAG CCT CGC CAA AAA CGT ACT GCT ACT AAA CAG TAC AAC GTC ACT CAA GCA TTT GGG AGA CGT GGT CCA GAG CAA ACC CAA GGA AAC TTT GGG GAC CAA GAA CTA ATC AGA CAA GGA ACT GAT TAC AAA CAT TGG CCG CAA ATT GCA CAA TTT GCT CCA AGT GCC TCT GCA TTC TTC GGA ATG TCA CGC ATT GGC ATG GAA GTC ACA CCT TCG GGA ACA TGG CTG ACT TAT CAT GGA GCC ATC AAA TTG GAT GAC AAA GAT CCA CAA TTC AAA GAC AAC GTC ATA CTG CTG AAC AAG CAC ATT GAC GCA TAT AAA ACA TTC CCA CCA ACA GAG CCT AAA AAG GAC AAA AAG AAA AAG ACT GAT GAA GCT CAG CCT TTA CCG CAG AGA CAA AAG AAG CAG CCC ACT GTG ACT CTT CTT CCT GCG GCT GAC ATG GAT GAT TTC TCC AGA CAA CTT CAA CAT TCC ATG AGT GGAGCTTCT GCT GAT TCT ACT CAG GCA TAA
KY352407_SARS_related_CoV_strain_BtKY72 ATG ACT GAT AAT GGA CAA CA---A GGA CCG CGC AAT GCG CCT CGC ATT ACG TTT GGT G-- -TC TCA GAT AAC TTT GAC AAT AAC CAG AAT GGA GAC CGT ACT GGA GCT AGG CCT AAG CAT AGA AGA CCG CAA GGC CCT CCT AAC AAC ACG GCA TCC TGG TTC ACC GCT CTC ACT CAA CAT GGT AAA GAA ACT CTC ACC TTC CCG AGA GGA CAA GGT GTG CCG ATT AAT ACC AAC AGT GGC AAA GAT GAC CAA ATT GGC TAC TAT AGA AGA GCT TCC CGA CGA GTT CGT GGT GGT GAC GGA AAA ATG AAA GAG TTG AGC CCA AGA TGG TAC TTC TAC TAC CTA GGA ACA GGA CCA GAG GCT GCA TTA CCT TAT GGT GCT AAT AAA GAA GGA ATA GTT TGG GTA GCC ACG GAA GGG GCA CTA AAC ACA CCT AAA GAA CAC ATT GGC ACG CGT AAT CCC AAC AAC AAC GCA GCC ATT GTC TTG CAA TTG CCT CAA GGT ACG TCC TTG CCA AAA GGA TTC TAC GCA GAA GGA AGT CGT GGT GGC AGC CAA ACC GCC TCA CGT TCC AGC TCA CGT AGT CGT GGA AAT TCC AGA AAT TCA ACG CCT AGC AGT AGC AGA GGT TCA TCA CCA GCA CGA AAC CTG CAA GCT GGA GGT GAC ACA GCA CTT GCC CTT TTG CTG CTA GAT AGG TTA AAC CAG TTG GAG AGC AAA GTT TCA GGT AAG ACA CAA CAA CAA CAA CCA CAA GTT GTC ACA AGA AAA TCA GCT TCT GAA GCT TCT AAG AAG CCC AGA CAA AAA CGA ACG GCT ACC AAG CAG TAC AAT GTC ACG CAA GCT TTT GGT AGA CGA GGA CCC GAA CAA ACA CAA GGC AAC TTT GGG GAC CAG GAA TTA ATC AGA TTA GGT ACT GAT TAC AAA AAT TGG CCA CAG ATA GCG CAG TTT GCA CCT AGT GCT TCA GCT TTC TTT GGC ATG TCC CGT ATT GGT ATG GAA GTC ACA CCT ACA GGG ACA TGG CTC ACT TAT CAT GGA GCC ATA AAA TTG GAT GAC AAA GAT CCA AAC TTC AAA GAC CAG GTT ATT TTG TTG AAT AAG CAC ATT GAT GCT TAT AAA ACA TTT CCA CCT ACT GAA CCT AAA AAG GAC AAA AAG AAG AAG GCT GAT GAA GTA CAG CCT CTG CCG CAG AGA CAG AAG AAA CAG CCA ACT GTT ACA CTG TTA CCT GCA GCT GAA TTG GAT GAT TTT TCC AAA CAA CTT CAG GAT TCC ATG AAT GGAGCCT-- -CA GAC TCA ACA CAG GCC TAA
NC_014470_Bat_CoV_BM48_31_BGR_2008 ATG ACT GAT AAT GGA CAA TC---A AAC TCG CGT AAT GCG CCT CGC ATT ACG TTT GGT G-- -TC TCA GAT ACC TCA GAC AAT AAT CAG AAT GCA GAA CGT GCT GGA GCG CGG CCA AAG CAA AGA AGA CCG CAA GGC CCT CCT AAC AAC ACA GCA TCC TGG TTC ACA GCT CTC ACT CAG CAT GGT AAA GAA GGT CTC TCC TTT CCG CGA GGA CAG GGA GTG CCC GTT AAT ACC AAT AGT ACC AGG GAC GAC CAA ATT GGC TAC TAT CGC AGA GCT ACC CGA CGA GTT CGT GGT GGT GAT GGT AAG ATG AAA GAA CTC AGC CCG CGC TGG TAC TTC TAC TAT CTA GGA ACT GGA CCA GAG GCC GCA TTA CCT TAT GGT GCT AAC AAA GAT GGC ATA GTT TGG GTC GCT ACA GAA GGA GCC CTA AAC ACG CCT AAA GAT CAC ATT GGC ACG CGC AAT CCC AAC AAC AAT GCT GCC ATT GTC ATA CAG TTA CCA CAA GGT ACT ACC TTG CCA AAA GGC TTC TAC GCT GAA GGA AGT CGT GGT GGC AGT CAA GCC TCC TCG CGT TCT AAC TCA CGT AGC CGT GGT AAT TCC AGA AAT TCA ACA CCT AGC AGC AGC AGA GGT TCA TCA CCT GCA CGC ATG GCT GCC --- GGA GGA GAT ACG GCA CTT GCA TTA TTG CTG TTA GAC AGG CTG AAC CAG CTT GAG AGC AAA GTT TCA GGT AAG AC- --A CCA CAA CAA TCA CAG GTT GTC ACA AAG AAA ACA GCT GCT GAG GCT TCT AAA AAG CCC AGA CAG AAA AGA ACA GCT ACC AAA GCC TAT AAT GTT ACT CAG GCT TTT GGT AGG CGA GGT CCC GAA CCT ACA CAG GGA AAT TTC GGT GAC CAG GAA TTA ATC AGA TTA GGT ACT GAT TAC AAA AAT TGG CCA CAG ATT GCA CAG TTT GCA CCC AGT GCT TCT GCA TTC TTT GGC ATG TCC CGT ATA GGA ATG GAA GTC ACA CCT ACA GGG ACT TGG TTA ACC TAT AAT GGT GCC ATA AAA TTG GAT GAT AAA GAC CCA AAT TTC AAA GAC CAA GTT ATT CTG CTT AAT AAG CAC ATT GAT GCT TAT AAG ACA TTT CCA CCT ACA GAA CCT AAA AAG GAC AAG AAG AAA AAG GCT GAT GAA GTA CAG TCA CTG CCG CAG CGT CAG AAG AAA CAG GCA ACT GTG ACT CTG TTA CCT GCA GCA GAT TTG GAT GAT TTT TCC AAA CAA CTT CAG AAT TCC ATG AAT ---GCTTCA CCT GAT TCT ACT CAG GCC TAA

nucleocapsid_phosphoprotein