NC_045512_SARS_CoV_2_Wuhan_Hu_1_aa | M | Y | S | F | V | S | E | E | T | G | T | L | I | V | N | S | V | L | L | F | L | A | F | V | V | F | L | L | V | T | L | A | I | L | T | A | L | R | L | C | A | Y | C | C | N | I | V | N | V | S | L | V | K | P | S | F | Y | V | Y | S | R | V | K | N | L | N | S | S | R | V | P | D | L | L | V | * |
NC_045512_SARS_CoV_2_Wuhan_Hu_1 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTT | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | CTT | GTA | AAA | CCT | TCT | TTT | TAC | GTT | TAC | TCT | CGT | GTT | AAA | AAT | CTG | AAT | TCT | TCT--- | AGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
MN996532_Bat_CoV_RaTG13 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | CTT | GTA | AAA | CCT | TCT | TTT | TAC | GTT | TAC | TCT | CGT | GTT | AAA | AAT | CTG | AAT | TCT | TCT--- | AGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
MG772933_Bat_SARS_like_CoV_bat_SL_CoVZC45 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTT | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | CTT | GTA | AAA | CCT | TCT | TTT | TAC | GTT | TAC | TCT | CGT | GTT | AAA | AAT | CTG | AAT | TCT | TCT--- | AGA | GTT | CCT | GAT | CTT | TTG | GTC | TAA |
MG772934_Bat_SARS_like_CoV_bat_SL_CoVZXC21 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTT | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | CTT | GTA | AAA | CCT | TCT | TTT | TAC | GTT | TAC | TCT | CGT | GTT | AAA | AAT | CTG | AAT | TCT | TCT--- | AGA | GTT | CCT | GAT | CTT | TTG | GTC | TAA |
NC_004718_SARS_CoV | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KT444582_SARS_like_CoV_WIV16 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACT | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417146_Bat_SARS_like_CoV_Rs4231 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTT | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTC | AAA | AAT | CTG | AAC | TCT | GCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
MK211376_CoV_BtRs_BetaCoV_YN2018B | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTC | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417151_Bat_SARS_like_CoV_Rs7327 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACT | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417152_Bat_SARS_like_CoV_Rs9401 | ATG | TAC | TCA | TTT | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACT | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CTT | GAT | CTT | CTG | GTC | TAA |
KY417144_Bat_SARS_like_CoV_Rs4084 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACT | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTCAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KF367457_Bat_SARS_like_CoV_WIV1 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACT | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KU973692_UNVERIFIED_SARS_related_CoV_F46 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTC | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417145_Bat_SARS_like_CoV_Rf4092 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGG | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KJ473816_BtRs_BetaCoV_YN2013 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY770858_Bat_CoV_Anlong_103 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417143_Bat_SARS_like_CoV_Rs4081 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417149_Bat_SARS_like_CoV_Rs4255 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACT | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGG | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
MK211378_CoV_BtRs_BetaCoV_YN2018D | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTC | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
FJ588686_Bat_SARS_CoV_Rs672_2006 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
MK211377_CoV_BtRs_BetaCoV_YN2018C | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417142_Bat_SARS_like_CoV_As6526 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTC | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417147_Bat_SARS_like_CoV_Rs4237 | ATG | TAC | TCA | TTT | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY417148_Bat_SARS_like_CoV_Rs4247 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CTT | GAT | CTT | CTG | GTC | TAA |
MK211375_CoV_BtRs_BetaCoV_YN2018A | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
DQ071615_Bat_SARS_CoV_Rp3 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTC | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTT | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KP886808_Bat_SARS_like_CoV_YNLF_31C | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | TTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KJ473815_BtRs_BetaCoV_GX2013 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTC | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KF569996_Rhinolophus_affinis_CoV_LYRa11 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AGC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
JX993988_Bat_CoV_Cp_Yunnan2011 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCT | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
MK211374_CoV_BtRl_BetaCoV_SC2018 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACG | ATT | TAC | GTC | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | TTG | GTC | TAA |
KJ473814_BtRs_BetaCoV_HuB2013 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | GTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
DQ412043_Bat_SARS_CoV_Rm1 | ATG | TAC | TCA | TTC | GTT | TCA | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTC | TTC | TTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTG | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAG | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY938558_Bat_CoV_strain_16BO133 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | GTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTT | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCT | ACA | GTT | TAT | GTC | TAC | TCG | CGT | GTT | AAA | AAC | CTG | AAC | TCT | TCTGAA | GGA | GTT | CCT | GAT | CTT | CTG | GTT | TAA |
DQ412042_Bat_SARS_CoV_Rf1 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | GTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTT | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCC | TCTGAT | TGT | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
DQ648856_Bat_CoV_BtCoV_273_2005 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | GTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTT | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCC | TCTGAT | TGT | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KJ473812_BtRf_BetaCoV_HeB2013 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | GTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTT | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAT | TGT | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY770860_Bat_CoV_Jiyuan_84 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | GTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTT | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCG | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAT | TGT | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
JX993987_Bat_CoV_Rp_Shaanxi2011 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTC | TTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGTA | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
GQ153542_Bat_SARS_CoV_HKU3_7 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | ATT | CTT | TTC | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAT | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAG | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
DQ022305_Bat_SARS_CoV_HKU3_1 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTC | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAG | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
GQ153547_Bat_SARS_CoV_HKU3_12 | ATG | TAC | TCA | TTC | GTT | TCG | GAA | GAG | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTC | CTT | GCT | TTC | GTG | GTA | TTC | TTG | CTA | GTC | ACA | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCA | ACA | GTT | TAC | GTT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AAC | TCT | TCTGAG | GGA | GTT | CCT | GAT | CTT | CTG | GTC | TAA |
KY352407_SARS_related_CoV_strain_BtKY72 | ATG | TAC | TCA | TTC | GTT | TCA | GAA | GAA | ACA | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTA | GCT | TTT | GTG | GTA | TTC | TTG | CTA | GTC | ACT | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCG | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTG | AAA | CCT | AGT | TTT | TAC | ATT | TAC | TCA | CGT | GTT | AAA | AAT | CTG | AAT | TCC | TCTCAG | GGC | ATT | CCT | GAT | CTT | TTG | GTC | TAA |
NC_014470_Bat_CoV_BM48_31_BGR_2008 | ATG | TAC | TCA | TTC | GTT | TCA | GAA | GAA | ACC | GGT | ACG | TTA | ATA | GTT | AAT | AGC | GTA | CTT | CTT | TTT | CTA | GCT | TTT | GTG | GTA | TTC | TTG | CTA | GTC | ACC | CTA | GCC | ATC | CTT | ACT | GCG | CTT | CGA | TTG | TGT | GCA | TAC | TGC | TGC | AAT | ATT | GTT | AAC | GTG | AGT | TTA | GTA | AAA | CCG | ACT | TTT | TAC | GTT | TAC | TCA | CGT | GTA | AAA | AGC | TTG | AAT | TCC | TCTCAG | GAG | GTT | CCT | GAA | TTT | CTG | GTC | TAA |
envelope_protein