Sender: LSF System Subject: Job 6547885: Done Job was submitted from host by user in cluster . Job was executed on host(s) , in queue , as user in cluster . was used as the home directory. was used as the working directory. Started at Wed Sep 4 14:52:12 2013 Results reported at Wed Sep 4 14:52:36 2013 Your job looked like: ------------------------------------------------------------ # LSBATCH: User input java -jar /broad/compbio/rca/publications/2012_encode_companion/code/java/PGVCFToUCSCPGSNPTrack.jar /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/NA12878_variants_for_analysis/NA12878.all.verified.hg19.lifted.processed.phased_het_only.pgvcf NA12878 /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/ucsc/NA12878.phased_het_only.ucsc.pgsnp "phased het" "NA12878 Phased het. variants" ------------------------------------------------------------ Successfully completed. Resource usage summary: CPU time : 52.83 sec. Max Memory : 2 MB Max Swap : 39 MB Max Processes : 1 Max Threads : 1 The output (if any) follows: Sender: LSF System Subject: Job 715536: Done Job was submitted from host by user in cluster . Job was executed on host(s) , in queue , as user in cluster . was used as the home directory. was used as the working directory. Started at Wed Oct 9 20:37:38 2013 Results reported at Wed Oct 9 20:38:01 2013 Your job looked like: ------------------------------------------------------------ # LSBATCH: User input java -jar /broad/compbio/rca/publications/2012_encode_companion/code/java/PGVCFToUCSCPGSNPTrack.jar /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/NA12878_variants_for_analysis/NA12878.all.verified.hg19.lifted.processed.phased_het_only.pgvcf NA12878 /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/ucsc/NA12878.phased_het_only.ucsc.pgsnp "phased het" "NA12878 Phased het. variants" ------------------------------------------------------------ Successfully completed. Resource usage summary: CPU time : 40.68 sec. Max Memory : 3 MB Max Swap : 39 MB Max Processes : 1 Max Threads : 1 The output (if any) follows: Sender: LSF System Subject: Job 813946: Done Job was submitted from host by user in cluster . Job was executed on host(s) , in queue , as user in cluster . was used as the home directory. was used as the working directory. Started at Thu Oct 10 15:25:13 2013 Results reported at Thu Oct 10 15:25:33 2013 Your job looked like: ------------------------------------------------------------ # LSBATCH: User input java -jar /broad/compbio/rca/publications/2012_encode_companion/code/java/PGVCFToUCSCPGSNPTrack.jar /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/NA12878_variants_for_analysis/NA12878.all.verified.hg19.lifted.processed.phased_het_only.pgvcf NA12878 /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/ucsc/NA12878.phased_het_only.ucsc.pgsnp "phased het" "NA12878 Phased het. variants" ------------------------------------------------------------ Successfully completed. Resource usage summary: CPU time : 23.43 sec. Max Memory : 3 MB Max Swap : 40 MB Max Processes : 1 Max Threads : 1 The output (if any) follows: Sender: LSF System Subject: Job 823876: Done Job was submitted from host by user in cluster . Job was executed on host(s) , in queue , as user in cluster . was used as the home directory. was used as the working directory. Started at Thu Oct 10 17:10:45 2013 Results reported at Thu Oct 10 17:11:03 2013 Your job looked like: ------------------------------------------------------------ # LSBATCH: User input java -jar /broad/compbio/rca/publications/2012_encode_companion/code/java/PGVCFToUCSCPGSNPTrack.jar /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/NA12878_variants_for_analysis/NA12878.all.verified.hg19.lifted.processed.phased_het_only.pgvcf NA12878 /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/ucsc/NA12878.phased_het_only.ucsc.pgsnp "phased het" "NA12878 Phased het. variants" ------------------------------------------------------------ Successfully completed. Resource usage summary: CPU time : 25.17 sec. Max Memory : 3 MB Max Swap : 40 MB Max Processes : 1 Max Threads : 1 The output (if any) follows: Sender: LSF System Subject: Job 3149317: Done Job was submitted from host by user in cluster . Job was executed on host(s) , in queue , as user in cluster . was used as the home directory. was used as the working directory. Started at Thu Oct 31 15:40:54 2013 Results reported at Thu Oct 31 15:41:30 2013 Your job looked like: ------------------------------------------------------------ # LSBATCH: User input java -jar /broad/compbio/rca/publications/2012_encode_companion/code/java/PGVCFToUCSCPGSNPTrack.jar /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/NA12878_variants_for_analysis/NA12878.all.verified.hg19.lifted.processed.phased_het_only.pgvcf NA12878 /broad/compbio/rca/publications/2012_encode_companion/data/refdata/NA12878_variants/ucsc/NA12878.phased_het_only.ucsc.pgsnp "phased het" "NA12878 Phased het. variants" ------------------------------------------------------------ Successfully completed. Resource usage summary: CPU time : 55.12 sec. Max Memory : 2082 MB Max Swap : 5503 MB Max Processes : 3 Max Threads : 21 The output (if any) follows: