track PhyloCSFNovelhsap38.v45
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v45.hg38_58.bb
shortLabel PhyloCSF Novel v45
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v45 Gene Set
visibility pack
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v44
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v44.hg38_58.bb
shortLabel PhyloCSF Novel v44
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v44 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v43
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v43.hg38_58.bb
shortLabel PhyloCSF Novel v43
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v43 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v42
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v42.hg38_58.bb
shortLabel PhyloCSF Novel v42
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v42 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v41
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v41.hg38_58.bb
shortLabel PhyloCSF Novel v41
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v41 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v40
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v40.hg38_58.bb
shortLabel PhyloCSF Novel v40
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v40 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v39
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v39.hg38_58.bb
shortLabel PhyloCSF Novel v39
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v39 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v38
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v38.hg38_58.bb
shortLabel PhyloCSF Novel v38
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v38 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v37
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v37.hg38_58.bb
shortLabel PhyloCSF Novel v37
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v37 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v36
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v36.hg38_58.bb
shortLabel PhyloCSF Novel v36
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v36 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v35
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v35.hg38_58.bb
shortLabel PhyloCSF Novel v35
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v35 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v34
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v34.hg38_58.bb
shortLabel PhyloCSF Novel v34
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v34 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v33
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v33.hg38_58.bb
shortLabel PhyloCSF Novel v33
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v33 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v32
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v32.hg38_58.bb
shortLabel PhyloCSF Novel v32
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v32 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v31
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v31.hg38_58.bb
shortLabel PhyloCSF Novel v31
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v31 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v30
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v30.hg38_58.bb
shortLabel PhyloCSF Novel v30
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v30 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v29
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v29.hg38_58.bb
shortLabel PhyloCSF Novel v29
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v29 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v28
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v28.hg38_58.bb
shortLabel PhyloCSF Novel v28
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v28 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v27
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v27.hg38_58.bb
shortLabel PhyloCSF Novel v27
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v27 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v26
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v26.hg38_58.bb
shortLabel PhyloCSF Novel v26
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v26 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v25
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v25.hg38_58.bb
shortLabel PhyloCSF Novel v25
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v25 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v24
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v24.hg38_58.bb
shortLabel PhyloCSF Novel v24
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v24 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSFNovelhsap38.v23
type bigBed 12 +
itemRgb on
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFNovel.hsap38.v23.hg38_58.bb
shortLabel PhyloCSF Novel v23
longLabel PhyloCSF Candidate Coding Regions (PCCRs)  (58 mammals) Not In GENCODE v23 Gene Set
visibility hide
priority 19
group PhyloCSF

track PhyloCSF_smooth
superTrack on show
shortLabel Smoothed PhyloCSF
longLabel Smoothed PhyloCSF (58 mammals)
type bigWig
autoscale off
viewLimits -15:15
maxHeightPixels 60:30:12
graphTypeDefault bar
yLineMark 0
yLineOnOff on
priority 20

    track PhyloCSF_plus_1
    parent PhyloCSF_smooth
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF+1.bw
    shortLabel PhyloCSF+1
    longLabel Smoothed PhyloCSF (58 mammals)  Strand +  Frame 1
    color 0,175,0
    visibility full
    graphTypeDefault bar
    priority 20

    track PhyloCSF_plus_2
    parent PhyloCSF_smooth
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF+2.bw
    shortLabel PhyloCSF+2
    longLabel Smoothed PhyloCSF (58 mammals)  Strand +  Frame 2
    color 0,175,0
    visibility full
    graphTypeDefault bar
    priority 20

    track PhyloCSF_plus_3
    parent PhyloCSF_smooth
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF+3.bw
    shortLabel PhyloCSF+3
    longLabel Smoothed PhyloCSF (58 mammals)  Strand +  Frame 3
    color 0,175,0
    visibility full
    graphTypeDefault bar
    priority 20

    track PhyloCSF_minus_1
    parent PhyloCSF_smooth
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF-1.bw
    shortLabel PhyloCSF-1
    longLabel Smoothed PhyloCSF (58 mammals)  Strand -  Frame 1
    color 200,0,0
    visibility full
    graphTypeDefault bar
    priority 20

    track PhyloCSF_minus_2
    parent PhyloCSF_smooth
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF-2.bw
    shortLabel PhyloCSF-2
    longLabel Smoothed PhyloCSF (58 mammals)  Strand -  Frame 2
    color 200,0,0
    visibility full
    graphTypeDefault bar
    priority 20

    track PhyloCSF_minus_3
    parent PhyloCSF_smooth
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF-3.bw
    shortLabel PhyloCSF-3
    longLabel Smoothed PhyloCSF (58 mammals)  Strand -  Frame 3
    color 200,0,0
    visibility full
    graphTypeDefault bar
    priority 20


track PhyloCSF_Regions
superTrack on hide
shortLabel PhyloCSF Regions
longLabel PhyloCSF (58 mammals) approximate coding regions
type bigBed 9 +
itemRgb on
visibility dense
priority 21

    track PhyloCSF_plus_1_regions
    parent PhyloCSF_Regions
    shortLabel PhyloCSF+1Regns
    longLabel PhyloCSF (58 mammals) approximate coding regions, Strand +, Frame 1
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF+1Regions.bb
    itemRgb on
    visibility dense
    priority 21

    track PhyloCSF_plus_2_regions
    parent PhyloCSF_Regions
    shortLabel PhyloCSF+2Regns
    longLabel PhyloCSF (58 mammals) approximate coding regions, Strand +, Frame 2
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF+2Regions.bb
    itemRgb on
    visibility dense
    priority 21

    track PhyloCSF_plus_3_regions
    parent PhyloCSF_Regions
    shortLabel PhyloCSF+3Regns
    longLabel PhyloCSF (58 mammals) approximate coding regions, Strand +, Frame 3
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF+3Regions.bb
    itemRgb on
    visibility dense
    priority 21

    track PhyloCSF_minus_1_regions
    parent PhyloCSF_Regions
    shortLabel PhyloCSF-1Regns
    longLabel PhyloCSF (58 mammals) approximate coding regions, Strand -, Frame 1
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF-1Regions.bb
    itemRgb on
    visibility dense
    priority 21

    track PhyloCSF_minus_2_regions
    parent PhyloCSF_Regions
    shortLabel PhyloCSF-2Regns
    longLabel PhyloCSF (58 mammals) approximate coding regions, Strand -, Frame 2
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF-2Regions.bb
    itemRgb on
    visibility dense
    priority 21

    track PhyloCSF_minus_3_regions
    parent PhyloCSF_Regions
    shortLabel PhyloCSF-3Regns
    longLabel PhyloCSF (58 mammals) approximate coding regions, Strand -, Frame 3
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSF-3Regions.bb
    itemRgb on
    visibility dense
    priority 21


track PhyloCSF_raw
superTrack on hide
shortLabel Raw PhyloCSF
longLabel Raw PhyloCSF (58 mammals)
type bigWig
autoscale off
viewLimits -15:15
maxHeightPixels 60:30:12
graphTypeDefault bar
yLineMark 0
yLineOnOff on
priority 22

    track PhyloCSFraw_plus_1
    parent PhyloCSF_raw
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFRaw+1.bw
    shortLabel PhyloCSFraw+1
    longLabel Raw PhyloCSF (58 mammals)  Strand +  Frame 1
    color 0,175,0
    visibility full
    graphTypeDefault bar
    priority 22

    track PhyloCSFraw_plus_2
    parent PhyloCSF_raw
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFRaw+2.bw
    shortLabel PhyloCSFraw+2
    longLabel Raw PhyloCSF (58 mammals)  Strand +  Frame 2
    color 0,175,0
    visibility full
    graphTypeDefault bar
    priority 22

    track PhyloCSFraw_plus_3
    parent PhyloCSF_raw
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFRaw+3.bw
    shortLabel PhyloCSFraw+3
    longLabel Raw PhyloCSF (58 mammals)  Strand +  Frame 3
    color 0,175,0
    visibility full
    graphTypeDefault bar
    priority 22

    track PhyloCSFraw_minus_1
    parent PhyloCSF_raw
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFRaw-1.bw
    shortLabel PhyloCSFraw-1
    longLabel Raw PhyloCSF (58 mammals)  Strand -  Frame 1
    color 200,0,0
    visibility full
    graphTypeDefault bar
    priority 22

    track PhyloCSFraw_minus_2
    parent PhyloCSF_raw
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFRaw-2.bw
    shortLabel PhyloCSFraw-2
    longLabel Raw PhyloCSF (58 mammals)  Strand -  Frame 2
    color 200,0,0
    visibility full
    graphTypeDefault bar
    priority 22

    track PhyloCSFraw_minus_3
    parent PhyloCSF_raw
    bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFRaw-3.bw
    shortLabel PhyloCSFraw-3
    longLabel Raw PhyloCSF (58 mammals)  Strand -  Frame 3
    color 200,0,0
    visibility full
    graphTypeDefault bar
    priority 22

track PhyloCSFpower
bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/PhyloCSFpower.bw
shortLabel PhyloCSF Power
longLabel Relative branch length of local alignment (58 mammals), a measure of PhyloCSF statistical power
type bigWig
autoscale off
viewLimits 0:1
maxHeightPixels 60:30:12
graphTypeDefault bar
yLineMark 0.5
yLineOnOff on
color 0,0,0
visibility hide
graphTypeDefault bar
priority 23

track Splice_prediction
superTrack on show
shortLabel Splice Predictions
longLabel Splice Predictions
type bigWig
autoscale off
viewLimits 0:15
maxHeightPixels 60:30:12
graphTypeDefault bar
yLineMark 15
yLineOnOff on
gridDefault on
showSubtrackColorOnUi on
priority 24
group PhyloCSF

    track Splice_plus
    container multiWig
    parent Splice_prediction
    aggregate transparentOverlay
    shortLabel SplicePred+
    longLabel Splice Predictions For + Strand
    visibility full

        track Donor_plus
        parent Splice_plus
        bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/Splice.donor.+.bw
        shortLabel SpliceDon+
        longLabel Splice Donor Predictions For + Strand 
        color 0,200,0
        type bigWig

        track Acceptor_plus
        parent Splice_plus
        bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/Splice.acceptor.+.bw
        shortLabel SpliceAcc+
        longLabel Splice Acceptor Predictions For + Strand
        color 200,0,0
        type bigWig

    track Splice_minus
    container multiWig
    parent Splice_prediction
    aggregate transparentOverlay
    shortLabel SplicePred-
    longLabel Splice Predictions For - Strand
    visibility full

        track Donor_minus
        parent Splice_minus
        bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/Splice.donor.-.bw
        shortLabel SpliceDon-
        longLabel Splice Donor Predictions For - Strand
        color 0,200,0
        type bigWig

        track Acceptor_minus
        parent Splice_minus
        bigDataUrl http://data.broadinstitute.org/compbio1/PhyloCSFtracks/hg38/latest/Splice.acceptor.-.bw
        shortLabel SpliceAcc-
        longLabel Splice Acceptor Predictions For - Strand
        color 200,0,0
        type bigWig