Image sets

Identification and segmentation

Accession Description Mode Fields Ground truth
BBBC001 Human HT29 colon-cancer cells Fluorescent 6 C
BBBC002 Drosophila Kc167 cells Fluorescent 50 C
BBBC003 Mouse embryos DIC 15 C F
BBBC004 Synthetic cells Fluorescent 100 C F
BBBC005 Synthetic cells Fluorescent 19,200 C F
BBBC006 Human U2OS cells (out of focus) Fluorescent 52,224 F O
BBBC007 Drosophila Kc167 cells Fluorescent 16 O
BBBC008 Human HT29 colon-cancer cells Fluorescent 12 F
BBBC009 Human red blood cells DIC 5 O
BBBC010 C. elegans live/dead assay (uneven illumination) Bright field and fluorescent 384 F O B
BBBC018 Human HT29 colon-cancer cells (diverse phenotypes) Fluorescent 55 O
BBBC019 Collective cell migration DIC 126 F
BBBC020 Murine bone-marrow derived macrophages Fluorescent 20 O
BBBC024 3D HL60 Cell Line (synthetic data) Fluorescent 120 FC
BBBC025 Human U2OS cells – RNAi Cell Painting experiment Fluorescent 27,648 B
BBBC026 Human Hepatocyte and Murine Fibroblast cells – Co-culture experiment Fluorescent 864 BC
BBBC027 3D Colon Tissue (synthetic data) Fluorescent 60 FC
BBBC028 Polymerized structures DIC 60 F
BBBC029 Synthetic DIC Images DIC 218 F
BBBC030 Chinese Hamster Ovary Cells DIC 60 O
BBBC032 Mouse embryo blastocyst cells Fluorescent 1 F
BBBC033 Mouse trophoblast stem cells Fluorescent 1 F
BBBC034 Induced pluripotent human stem cells Bright field and fluorescent 2 F
BBBC035 Simulated HL60 cells (from the Cell Tracking Challenge) Fluorescent 2 F
BBBC038 Kaggle 2018 Data Science Bowl Fluorescent 735 F
BBBC039 Nuclei of U2OS cells in a chemical screen Fluorescent 200 FBOC
BBBC041 P. vivax (malaria) infected human blood smears Bright field 1364 CU
BBBC042 Rat astrocyte cells Bright field 1200 B

Phenotype classification

Accession Description Mode Fields Ground truth
BBBC010 C. elegans live/dead assay Bright field and fluorescent 384 F O B
BBBC011 C. elegans metabolism assay Bright field and fluorescent 50 B
BBBC012 C. elegans infection marker Bright field and fluorescent 120 B
BBBC013 Human U2OS cells cytoplasm–nucleus translocation Fluorescent 96 B
BBBC014 Human U2OS cells cytoplasm–nucleus translocation Fluorescent 96 B
BBBC015 Human U2OS cells transfluor Fluorescent 144 B
BBBC016 Human U2OS cells transfluor Fluorescent 144 B
BBBC021 Human MCF7 cells – compound-profiling experiment Fluorescent 13,200 B
BBBC036 Human U2OS Cells – profiling bioactive compounds using Cell Painting Fluorescent 6 B
BBBC037 Human U2OS cells - Gene overexpression profiling experiment Fluorescent 9 B
BBBC041 P. vivax (malaria) infected human blood smears Bright field 1364 CU

Complete high-throughput experiments without ground truth

Accession Description Mode Fields Ground truth
BBBC017 Human HT29 colon-cancer cells shRNAi screen Fluorescent 64,512
BBBC022 Human U2OS cells – compound-profiling Cell Painting experiment Fluorescent 69,120 B