• Blast    Search our database for local alignments against nucleotide or protein sequence.

  • Pfam    Browse Genes by PFAM Domain

  • Rfam    Browse Functional RNAs

  • Functional Enrichment    Search for genes based on function

  • Dot Plot    Displays a dotplot of a reference genome compared to one or more alternate genomes.

  • Genome Map    View and compare features on the Genome Map

  • Gene/Feature Search    Search for genes and features such as BlastX hits, tRNAs, rRNAs, ORFs, and more.

  • Search Gene Families    Search gene families by included genomes or by gene description.

  • View Genome Regions    View entire genomes or portions thereof.