# go

id: GO:0075252
name: regulation of uredospore formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium." [GOC:pamgo_curators]


id: GO:0075253
name: positive regulation of uredospore formation
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium." [GOC:pamgo_curators]


id: GO:0075254
name: negative regulation of uredospore formation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium." [GOC:pamgo_curators]


id: GO:0075255
name: teliospore formation
namespace: biological_process
def:
  "The set of processes leading to the formation of a thick-walled resting or over-wintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs." [GOC:pamgo_curators]


id: GO:0075256
name: regulation of teliospore formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or over-wintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs." [GOC:pamgo_curators]


id: GO:0075257
name: positive regulation of teliospore formation
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or overwintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs." [GOC:pamgo_curators]


id: GO:0075258
name: negative regulation of teliospore formation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or overwintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs." [GOC:pamgo_curators]


id: GO:0075259
name: spore-bearing organ development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of a spore-bearing organ over time, from its formation to the mature structure. A spore-bearing organ is an anatomical structure that produces new spores." [GOC:mah, GOC:mcc, GOC:pamgo_curators]


id: GO:0075260
name: regulation of spore-bearing organ development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores." [GOC:pamgo_curators]


id: GO:0075261
name: positive regulation of spore-bearing organ development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores." [GOC:pamgo_curators]


id: GO:0075262
name: negative regulation of spore-bearing organ development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores." [GOC:pamgo_curators]


id: GO:0075263
name: oogonium development
namespace: biological_process
def:
  "The process that leads to the development of an oogonium, a female gametangium of Oomycetes, containing one or more gametes." [GOC:pamgo_curators]


id: GO:0075264
name: regulation of oogonium development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes." [GOC:pamgo_curators]


id: GO:0075265
name: positive regulation of oogonium development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes." [GOC:pamgo_curators]


id: GO:0075266
name: negative regulation of oogonium development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes." [GOC:pamgo_curators]


id: GO:0075267
name: aecium development
namespace: biological_process
def:
  "The process in which a cup-like structure containing chains of aeciospores is formed. This is characteristic of the rust fungus and typically, the first dikaryotic spores (aeciospores) are produced in the aecium." [GOC:pamgo_curators]


id: GO:0075268
name: regulation of aecium development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed." [GOC:pamgo_curators]


id: GO:0075269
name: positive regulation of aecium development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed." [GOC:pamgo_curators]


id: GO:0075270
name: negative regulation of aecium development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed." [GOC:pamgo_curators]


id: GO:0075271
name: zygosporangium development
namespace: biological_process
def:
  "The process in which a fruiting body called zygosporangium is formed. A zygosporangium is a thick-walled structure in which spores are produced, and is characteristic of the Zygomycetes." [GOC:pamgo_curators]


id: GO:0075272
name: regulation of zygosporangium development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed." [GOC:pamgo_curators]


id: GO:0075273
name: positive regulation of zygosporangium development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed." [GOC:pamgo_curators]


id: GO:0075274
name: negative regulation of zygosporangium development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed." [GOC:pamgo_curators]


id: GO:0075275
name: telium development
namespace: biological_process
def:
  "The process that leads to the development of a telium, which is a teliospore-bearing sorus of the rust fungi." [GOC:pamgo_curators]


id: GO:0075276
name: regulation of telium development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi." [GOC:pamgo_curators]


id: GO:0075277
name: positive regulation of telium development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi." [GOC:pamgo_curators]


id: GO:0075278
name: negative regulation of telium development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of telium development, a process that leads to the formation of a teliospore-bearing sorus of the rust fungi." [GOC:pamgo_curators]


id: GO:0075279
name: uredinium development
namespace: biological_process
def:
  "The process that leads to the formation of a uredinium, a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores." [GOC:pamgo_curators]


id: GO:0075280
name: regulation of uredinium development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores." [GOC:pamgo_curators]


id: GO:0075281
name: positive regulation of uredinium development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores." [GOC:pamgo_curators]


id: GO:0075282
name: negative regulation of uredinium development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores." [GOC:pamgo_curators]


id: GO:0075283
name: sporulation resulting in formation of a multicellular or syncytial spore
namespace: biological_process
def:
  "The process whose specific outcome is the progression of a multicellular or syncytial spore via septations over time, from its initiation to the mature structure." [GOC:pamgo_curators]


id: GO:0075284
name: asexual sporulation resulting in formation of a multicellular or syncytial spore
namespace: biological_process
def:
  "The formation of a multicellular or syncytial spore via septations derived from mitosis." [GOC:pamgo_curators]


id: GO:0075285
name: sexual sporulation resulting in formation of a multicellular or syncytial spore
namespace: biological_process
def:
  "The formation of multicellular or syncytial spore via septations derived from meiosis. A multicellular or syncytial spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction." [GOC:pamgo_curators]


id: GO:0075286
name: regulation of sporangiospore formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm." [GOC:pamgo_curators]


id: GO:0075287
name: positive regulation of sporangiospore formation
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm." [GOC:pamgo_curators]


id: GO:0075288
name: negative regulation of sporangiospore formation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm." [GOC:pamgo_curators]


id: GO:0075289
name: aplanospore formation
namespace: biological_process
def:
  "The process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell." [GOC:pamgo_curators]


id: GO:0075290
name: regulation of aplanospore formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell." [GOC:pamgo_curators]


id: GO:0075291
name: positive regulation of aplanospore formation
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell." [GOC:pamgo_curators]


id: GO:0075292
name: negative regulation of aplanospore formation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell." [GOC:pamgo_curators]


id: GO:0075293
name: response to host pH environment
namespace: biological_process
def:
  "Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075294
name: positive regulation by symbiont of entry into host
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075295
name: positive regulation by organism of entry into other organism involved in symbiotic interaction
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent to which it enters into a second organism, where the two organisms are in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075296
name: positive regulation of ascospore formation
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus." [GOC:pamgo_curators]


id: GO:0075297
name: negative regulation of ascospore formation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus." [GOC:pamgo_curators]


id: GO:0075298
name: regulation of zygospore formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase." [GOC:pamgo_curators]


id: GO:0075299
name: positive regulation of zygospore formation
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase." [GOC:pamgo_curators]


id: GO:0075300
name: negative regulation of zygospore formation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase." [GOC:pamgo_curators]


id: GO:0075301
name: cell differentiation involved in spore germination
namespace: biological_process
def:
  "The process in which a relatively unspecialized cell acquires specialized features of a specific cell type occurring during spore germination, the physiological and developmental changes that occur in a spore following release from dormancy up to the earliest signs of growth." [GOC:jl]


id: GO:0075302
name: regulation of basidiospore formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi Basidiomycetes." [GOC:pamgo_curators]


id: GO:0075303
name: positive regulation of basidiospore formation
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi basidiomycetes." [GOC:pamgo_curators]


id: GO:0075304
name: negative regulation of basidiospore formation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi basidiomycetes." [GOC:pamgo_curators]


id: GO:0075305
name: obsolete modulation of growth or development of symbiont on or near host
namespace: biological_process
def:
  "OBSOLETE. Any process by which the symbiont regulates the increase in its size or mass, or its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism." [GOC:pamgo_curators]


id: GO:0075306
name: regulation of conidium formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of conidium formation, a processes leading to the production of a type of asexual non-motile reproductive spore of fungi via mitosis at the tip or side of hyphae or on special spore-producing structures called conidiophores." [GOC:pamgo_curators]


id: GO:0075307
name: positive regulation of conidium formation
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of conidium formation, a processes leading to the production of a type of asexual non-motile reproductive spore of fungi via mitosis at the tip or side of hyphae or on special spore-producing structures called conidiophores." [GOC:pamgo_curators]


id: GO:0075308
name: negative regulation of conidium formation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of conidium formation, a processes leading to the production of a type of asexual non-motile reproductive spore of fungi via mitosis at the tip or side of hyphae or on special spore-producing structures called conidiophores." [GOC:pamgo_curators]


id: GO:0075309
name: obsolete negative regulation of growth or development of symbiont on or near host surface
namespace: biological_process
def:
  "OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in the symbiont's size or mass, or its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism." [GOC:pamgo_curators]


id: GO:0075310
name: regulation of sporangium development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms." [GOC:pamgo_curators]


id: GO:0075311
name: positive regulation of sporangium development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms." [GOC:pamgo_curators]


id: GO:0075312
name: negative regulation of sporangium development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms." [GOC:pamgo_curators]


id: GO:0075313
name: basidium development
namespace: biological_process
def:
  "The process that leads to the development of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to Basidiomycetes and distinguishes them from other kinds of fungi." [GOC:di, GOC:mah, GOC:mcc, GOC:pamgo_curators]


id: GO:0075314
name: regulation of basidium development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of basidium development, a process that leads to the formation of a basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to Basidiomycetes and distinguishes them from other kinds of fungi." [GOC:pamgo_curators]


id: GO:0075315
name: positive regulation of basidium development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi." [GOC:pamgo_curators]


id: GO:0075316
name: negative regulation of basidium development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi." [GOC:pamgo_curators]


id: GO:0075317
name: ascus development
namespace: biological_process
def:
  "The process that leads to the development of ascus, a sac-like structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed." [GOC:di, GOC:mah, GOC:mcc, GOC:pamgo_curators]


id: GO:0075318
name: regulation of ascus development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of ascus development, a process that leads to the formation of basidium, a sac-like structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed." [GOC:pamgo_curators]


id: GO:0075319
name: positive regulation of ascus development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed." [GOC:pamgo_curators]


id: GO:0075320
name: negative regulation of ascus development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed." [GOC:pamgo_curators]


id: GO:0075321
name: oomycete sporangium development
namespace: biological_process
def:
  "The process that leads to the development of an oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiates, through specialized cleavage vesicles, into between 10 and 30 zoospores, which are laterally flagellated." [GOC:pamgo_curators]


id: GO:0075322
name: regulation of oomycete sporangium development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of oomycete sporangium development, a process that leads to the formation of oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiate, through specialized cleavage vesicles, into between 10 and 30 zoospores, which is laterally flagellated." [GOC:pamgo_curators]


id: GO:0075323
name: positive regulation of oomycete sporangium development
namespace: biological_process
def:
  "Any process that activates, maintains or increases the frequency, rate or extent of oomycete sporangium development, a process that leads to the formation of oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiate, through specialized cleavage vesicles, into between 10 and 30 zoospores, which is laterally flagellated." [GOC:pamgo_curators]


id: GO:0075324
name: negative regulation of oomycete sporangium development
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of oomycete sporangium development, a process that leads to the formation of oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiate, through specialized cleavage vesicles, into between 10 and 30 zoospores, which is laterally flagellated." [GOC:pamgo_curators]


id: GO:0075325
name: spore dispersal on or near host
namespace: biological_process
def:
  "Any process in which a symbiont disseminates its spores, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075326
name: active spore dispersal on or near host
namespace: biological_process
def:
  "Any active process in which a symbiont disseminates its spores, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075327
name: passive spore dispersal on or near host
namespace: biological_process
def:
  "Any passive process in which a symbiont disseminates its spores, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075328
name: formation by symbiont of arbuscule for nutrient acquisition from host
namespace: biological_process
def:
  "The assembly by an organism of an arbuscule, a fine, tree-like hyphal structure projected into the host cell for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075329
name: regulation of arbuscule formation for nutrient acquisition from host
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075330
name: positive regulation of arbuscule formation for nutrient acquisition from host
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075331
name: negative regulation of arbuscule formation for nutrient acquisition from host
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075332
name: modulation by host of symbiont adenylate cyclase-mediated signal transduction
namespace: biological_process
def:
  "Any process in which the host organism modulates the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075333
name: positive regulation by host of symbiont adenylate cyclase-mediated signal transduction
namespace: biological_process
def:
  "Any process in which the host organism activates, maintains or increases the frequency, rate or extent of adenylate cyclase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075334
name: modulation of symbiont adenylate cyclase-mediated signal transduction in response to host
namespace: biological_process
def:
  "Any process in which the symbiont organism modulates the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075335
name: positive regulation of symbiont adenylate cyclase-mediated signal transduction in response to host
namespace: biological_process
def:
  "Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075336
name: negative regulation of symbiont adenylate cyclase-mediated signal transduction in response to host
namespace: biological_process
def:
  "Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075337
name: obsolete positive regulation of growth or development of symbiont on or near host surface
namespace: biological_process
def:
  "OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's increase in size or mass, or its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism." [GOC:pamgo_curators]


id: GO:0075338
name: obsolete modulation of growth or development of symbiont during interaction with host
namespace: biological_process
def:
  "OBSOLETE. Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism." [GOC:jl]


id: GO:0075339
name: obsolete positive regulation of growth or development of symbiont during interaction with host
namespace: biological_process
def:
  "OBSOLETE. Any process that activates or increases the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism." [GOC:jl]


id: GO:0075340
name: obsolete negative regulation of growth or development of symbiont during interaction with host
namespace: biological_process
def:
  "OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism." [GOC:jl]


id: GO:0075341
name: host cell PML body
namespace: cellular_component
def:
  "A nuclear body that reacts against SP100 auto-antibodies (PML = promyelocytic leukemia) located within a cell of a host organism." [GOC:BHF, GOC:jl]


id: GO:0075342
name: disruption by symbiont of host cell PML body
namespace: biological_process
def:
  "The breakdown, by the symbiont, of a PML body within a host cell. A PML body is a nuclear body that reacts against SP100 auto-antibodies (PML = promyelocytic leukemia). The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:BHF, GOC:jl]


id: GO:0075343
name: modulation by symbiont of abscisic acid levels in host
namespace: biological_process
def:
  "The alteration by an organism of the levels of abscisic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075344
name: modulation by symbiont of host protein levels
namespace: biological_process
def:
  "The alteration by an organism of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075345
name: modification by symbiont of host protein
namespace: biological_process
def:
  "The covalent alteration by an organism of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075346
name: modification by symbiont of host protein by ubiquitination
namespace: biological_process
def:
  "The process in which an organism adds one or more ubiquitin groups to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0075502
name: endosome membrane permeabilization involved in viral entry into host cell
namespace: biological_process
def:
  "Induction of endosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus through the endosomal pathway, and results in delivery of the virus contents into the host cell cytoplasm." [GOC:bf, GOC:jl]


id: GO:0075503
name: fusion of virus membrane with host macropinosome membrane
namespace: biological_process
def:
  "Fusion of a viral membrane with a host macropinosome membrane, that occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents into the host cell cytoplasm." [GOC:bf, GOC:jl]


id: GO:0075504
name: macropinosomal membrane permeabilization involved in viral entry into host cell
namespace: biological_process
def:
  "Induction of macropinosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus in a macropinosome, and results in release of the viral contents from the macropinosome into the host cell cytoplasm." [GOC:bf, GOC:jl]


id: GO:0075505
name: entry of intact viral capsid into host nucleus through nuclear pore complex
namespace: biological_process
def:
  "Viral penetration into the host nucleus where a viral capsid passes intact through the host nuclear pore complex (NPC)." [PMID:22929056, VZ:989]


id: GO:0075506
name: entry of viral genome into host nucleus through nuclear pore complex via importin
namespace: biological_process
def:
  "Viral penetration into the host nucleus where the viral genome passes through the nuclear pore complex (NPC) using the cellular importin transport machinery." [PMID:22929056, VZ:989]


id: GO:0075507
namespace: biological_process
name:
  entry of viral genome into host nucleus via docking of viral capsid to the nuclear pore complex and injection of viral genome

def:
  "Viral penetration into the host nucleus where the where a viral capsid docks on the cytoplasmic side of the nuclear pore complex (NPC) and ejects the viral genome through the pore into the nucleoplasm." [PMID:22929056, VZ:989]


id: GO:0075508
namespace: biological_process
name:
  entry of viral genome into host nucleus via retainment of capsid in nuclear pore complex and release of genome into nucleoplasm

def:
  "Viral penetration into the host nucleus where a viral capsid enters the host nuclear pore complex (NPC) but remains attached to the pore on the nuclear side. The capsid then disassembles, releasing the viral genome into the nucleoplasm." [PMID:22929056, VZ:989]


id: GO:0075509
name: endocytosis involved in viral entry into host cell
namespace: biological_process
def:
  "Any endocytosis that is involved in the uptake of a virus into a host cell." [GOC:bf, GOC:jl, VZ:977]


id: GO:0075510
name: macropinocytosis involved in viral entry into host cell
namespace: biological_process
def:
  "Any macropinocytosis that is involved in the uptake of a virus into a host cell." [GOC:jl, GOC:sp, PMID:17077125, PMID:19404330, VZ:800]


id: GO:0075511
name: macropinosome lysis involved in viral entry into host cell
namespace: biological_process
def:
  "Viral-induced lysis of the macropinosome involved in the uptake of a virus into a host cell. Occurs after internalization of the virus in a macropinosome, and results in the release of viral contents from the macropinosome into the host cell cytoplasm." [GOC:bf, GOC:jl]


id: GO:0075512
name: clathrin-mediated endocytosis of virus by host cell
namespace: biological_process
def:
  "Any clathrin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicle containing the virus." [GOC:bf, GOC:jl, VZ:957]


id: GO:0075513
name: caveolin-mediated endocytosis of virus by host cell
namespace: biological_process
def:
  "Any caveolin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins when material is taken up into plasma membrane caveolae - specialized lipid rafts that form 50-70 nm flask-shaped invaginations of the plasma membrane - which then pinch off to form endocytic caveolar carriers containing the virus." [GOC:bf, GOC:jl, VZ:976]


id: GO:0075514
name: endosome lysis involved in viral entry into host cell
namespace: biological_process
def:
  "Viral-induced lysis of the endosome involved in uptake of a virus into a host cell. Occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents from the endosome into the host cell cytoplasm." [GOC:bf, GOC:jl]


id: GO:0075515
namespace: biological_process
name:
  obsolete viral entry into host cell via caveolin-mediated endocytosis followed by genetic injection through the endosome membrane

def:
  "OBSOLETE. The uptake of a virus into a host cell that begins when material is taken up into plasma membrane caveolae which then pinch off to form endocytic caveolar carriers containing the virus. The caveolar carriers then deliver their viral content to early endosomes, and the process ends when viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane." [GOC:jl, VZ:976]


id: GO:0075519
name: microtubule-dependent intracellular transport of viral material
namespace: biological_process
def:
  "The directed movement of the viral genome or viral particle within the host cell cytoplasm along host microtubules. Microtubule-dependent transport involves motor proteins like dynein and kinesin and is mostly used by viruses that target their genomes to the nucleus." [VZ:983]


id: GO:0075520
name: actin-dependent intracellular transport of virus
namespace: biological_process
def:
  "The directed movement of a virus, or part of a virus, within the host cell cytoplasm via the host's actin filaments. Actin-dependent transport is induced by viral proteins that interact with actin and/or host cell motor proteins like myosins or that promotes actin polymerization/depolymerization reactions." [UniProtKB-KW:KW-1178, VZ:991]


id: GO:0075521
name: microtubule-dependent intracellular transport of viral material towards nucleus
namespace: biological_process
def:
  "The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules." [UniProtKB-KW:KW-1177, VZ:983]


id: GO:0075522
name: IRES-dependent viral translational initiation
namespace: biological_process
def:
  "Process by which viral mRNA translation is initiated, where a domain in the 5' untranslated region (UTR) of the viral mRNA called an internal ribosome entry site (IRES) binds the host 43S preinitiation complex, circumventing regular cap-dependent translation initiation." [GOC:bf, GOC:jl, PMID:19632368, VZ:867]


id: GO:0075523
name: viral translational frameshifting
namespace: biological_process
def:
  "A process which occurs during viral translation, which involves a translational recoding mechanism called programmed ribosomal frameshifting. This causes the ribosome to alter its reading of the mRNA to an a different open reading frame to produce alternate viral proteins." [GOC:bf, GOC:ch, GOC:jl, PMID:24825891, PMID:8852897, VZ:860]


id: GO:0075524
name: ribosomal skipping
namespace: biological_process
def:
  "A translation process in which a specific viral peptide prevents the ribosome from covalently linking a new inserted amino acid, and lets it continue translation, thereby cleaving the nascent protein while allowing translation to continue." [GOC:bf, GOC:ch, GOC:jl, VZ:914]


id: GO:0075525
name: viral translational termination-reinitiation
namespace: biological_process
def:
  "A process which occurs as part of viral mRNA translation which allows expression of a downstream open reading frame (ORF) in a dicistronic mRNA. In this process, ribosomes translate the upstream ORF but following termination, a proportion of 40S subunits remain tethered to the mRNA and go on to re-initiate translation at the start codon of the downstream ORF." [GOC:bf, GOC:ch, GOC:jl, PMID:18631147, PMID:18824510, VZ:858]


id: GO:0075526
name: cap snatching
namespace: biological_process
def:
  "A transcription initiation process during which a nucleotide sequence between 10 and 20 nucleotides in size is cleaved from the 5' end of host mRNAs by a viral RNA-dependent polymerase. The capped leader sequence obtained is subsequently used to prime transcription on the viral genome, which ultimately leads to the synthesis of capped, translatable viral mRNAs." [GOC:bf, GOC:jl, VZ:839]


id: GO:0075527
name: viral RNA editing
namespace: biological_process
def:
  "The process by which bases in viral mRNA are chemically altered during viral transcription. This is usually the incorporation of 1 - 6 additional nucleotides, which shifts the reading frame, allowing the generation of different protein products or through a specific nucleotide change that eliminates the termination codon." [PMID:1629949, VZ:857]


id: GO:0075529
name: establishment of latency as a circular episome
namespace: biological_process
def:
  "A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a circular structure." [GOC:jl]


id: GO:0075530
name: establishment of latency as a linear episome
namespace: biological_process
def:
  "A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure." [GOC:jl]


id: GO:0075606
name: transport of viral material towards nucleus
namespace: biological_process
def:
  "The directed movement of a virus, or part of a virus, towards the host cell nucleus. The process begins after viral entry, and ends when the viral material is at the nuclear membrane." [GOC:bf, GOC:jl, VZ:990]


id: GO:0075705
namespace: biological_process
name:
  obsolete viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane

def:
  "OBSOLETE. The uptake of a virus into a host cell that begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicles containing the virus. The vesicle then delivers its viral content to early endosomes, and the process ends when the viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane." [GOC:jl]


id: GO:0075713
name: establishment of integrated proviral latency
namespace: biological_process
def:
  "A process by which the virus integrates into the host genome and establishes as a stable provirus or prophage." [GOC:jl]


id: GO:0075720
name: establishment of episomal latency
namespace: biological_process
def:
  "A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a distinct genetic entity." [GOC:jl]


id: GO:0075732
name: viral penetration into host nucleus
namespace: biological_process
def:
  "The crossing by the virus of the host nuclear membrane, either as naked viral genome or for small viruses as an intact capsid." [PMID:22929056, VZ:989]


id: GO:0075733
name: intracellular transport of virus
namespace: biological_process
def:
  "The directed movement of a virus, or part of a virus, within the host cell." [GOC:ai, GOC:bf, GOC:jl, PMID:11733033]


id: GO:0080001
name: mucilage extrusion from seed coat
namespace: biological_process
def:
  "The process in which seed mucilage expands through hydration and breaks the outer cell wall that encapsulates the whole seed upon imbibition. Mucilage, mainly composed of pectins, is formed during seed development and deposited into the apoplast underneath the outer wall of the seed coat." [PMID:18266922]


id: GO:0080002
name: UDP-glucose:4-aminobenzoate acylglucosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 4-aminobenzoate + UDP-glucose = p-aminobenzoate-beta-D-glucopyranosyl ester + UDP." [EC:2.4.1.-, PMID:18385129]


id: GO:0080004
name: thalian-diol desaturase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: a thalian-diol = a desaturated thalian-diol. This reaction is the introduction of a double bond to a thalian-diol molecule at carbon 15." [PMID:18356490]


id: GO:0080005
name: photosystem stoichiometry adjustment
namespace: biological_process
def:
  "Adjustment of Photosystem I/Photosystem II ratio in response to light conditions. The function of photosystem stoichiometry adjustment is to compensate for any deficiency in energy conversion at either photosystem I or photosystem II by increasing the quantity the photosystem that will otherwise become the rate-limiting to overall photosynthesis." [PMID:11607105]


id: GO:0080006
name: internode patterning
namespace: biological_process
def:
  "Determines the spacing between two shoot nodes. A shoot node is the region of the shoot where the spikelet, flower, floret, branch, bud and/or leaves are attached." [GOC:tb]


id: GO:0080007
name: S-nitrosoglutathione reductase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: glutathione N-hydroxysulfenamide + NADH + H+ = S-nitrosoglutathione + NAD+." [MetaCyc:RXN-10742, PMID:11260719]


id: GO:0080008
name: Cul4-RING E3 ubiquitin ligase complex
namespace: cellular_component
def:
  "A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein." [PMID:16792691, PMID:18223036, PMID:18552200]


id: GO:0080009
name: mRNA methylation
namespace: biological_process
def:
  "The posttranscriptional addition of methyl groups to specific residues in an mRNA molecule." [PMID:18505803]


id: GO:0080010
name: obsolete regulation of oxygen and reactive oxygen species metabolic process
namespace: biological_process
def:
  "OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH)." [PMID:18450450]


id: GO:0080011
name: baruol synthase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: (S)-2,3-epoxysqualene = baruol. Baruol is also known as D:B-Friedo-Baccharan-5,21-dien-3-ol." [MetaCyc:RXN-9685, PMID:17705488]


id: GO:0080012
name: trihydroxyferuloyl spermidine O-methyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: trihydroxyferuloyl spermidine + S-adenosyl-L-methionine = dihydroxyferuloyl-sinapoyl spermidine + S-adenosyl-L-homocysteine + H+." [PMID:18557837]


id: GO:0080013
name: (E,E)-geranyllinalool synthase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: all-trans-geranyl-geranyl diphosphate + H2O = (E,E)-geranyllinalool + diphosphate." [MetaCyc:RXN-10441, PMID:18398052]


id: GO:0080014
name: thalianol hydroxylase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: a thalianol = a thalian-diol. This reaction is the addition of a hydroxyl group to thalianol ((13R,14R,17E)-podioda-8,17,21-trien-3beta-ol) to create a thalian-diol ((13R,14R,17E)-podioda-8,17,21-trien-3beta,X-diol), where the hydroxyl group may be attached at one of several different available carbons in ring B or C of thalianol, indicated by the X." [MetaCyc:RXN-9631, PMID:17474751, PMID:18356490]


id: GO:0080015
name: sabinene synthase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: geranyl diphosphate = sabinene + diphosphate." [MetaCyc:RXN-5103, PMID:12566586, PMID:9747540]


id: GO:0080016
name: (-)-E-beta-caryophyllene synthase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-E-beta-caryophyllene + diphosphate." [MetaCyc:RXN-8414, PMID:12566586, PMID:9442047]


id: GO:0080017
name: alpha-humulene synthase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = alpha-humulene + diphosphate." [PMID:12566586, PMID:9442047]


id: GO:0080018
name: anthocyanin 5-O-glucosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: an anthocyanin + UDP-D-glucose = an anthocyanin-5-O-glucoside + UDP." [PMID:15807784]


id: GO:0080019
name: fatty-acyl-CoA reductase (alcohol-forming) activity
namespace: molecular_function
def:
  "Catalysis of the reaction: a very long chain fatty acyl-CoA + NADPH + H+ = a very long chain primary alcohol + NADP+ + CoA." [PMID:16980563]


id: GO:0080020
name: regulation of coenzyme A biosynthetic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving coenzyme A." [PMID:18621975]


id: GO:0080021
name: response to benzoic acid
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus." [PMID:18753285]


id: GO:0080022
name: primary root development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle." [GOC:dhl]


id: GO:0080024
name: indolebutyric acid metabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways involving indolebutyric acid, a compound that serves as an active or storage form of the hormone indole-3-acetic acid (an auxin) in many plants." [PMID:18725356]


id: GO:0080025
name: phosphatidylinositol-3,5-bisphosphate binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with phosphatidylinositol-3,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' and 5' positions." [GOC:bf, PMID:18397324]


id: GO:0080026
name: response to indolebutyric acid
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an indolebutyric acid stimulus." [PMID:18725356]


id: GO:0080027
name: response to herbivore
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore." [PMID:18987211]


id: GO:0080028
name: nitrile biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom." [PMID:18987211]


id: GO:0080029
name: cellular response to boron-containing substance levels
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of boron-containing substances." [PMID:18952773]


id: GO:0080030
name: methyl indole-3-acetate esterase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: methyl indole-3-acetate + H2O = indole-3-acetate + methanol + H+." [MetaCyc:RXN-10711, PMID:18467465]


id: GO:0080031
name: methyl salicylate esterase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: methyl salicylate + H2O = salicylic acid + methanol + H+." [MetaCyc:RXNQT-4366, PMID:18467465, PMID:18643994]


id: GO:0080032
name: methyl jasmonate esterase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: a methyl jasmonate + H2O = a jasmonic acid + methanol." [PMID:15233793, PMID:18467465]


id: GO:0080033
name: response to nitrite
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus." [GOC:dhl, PMID:17951451]


id: GO:0080034
name: host response to induction by symbiont of tumor, nodule or growth in host
namespace: biological_process
def:
  "Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction." [PMID:18836040]


id: GO:0080035
name: 2-hydroxy-but-3-enyl glucosinolate biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of progoitrin, a 2-hydroxy-but-3-enyl glucosinolate. Glucosinolates are substituted thioglucosides found in rapeseed products and related cruciferae, and progoitrin has been implicated in causing goiters in mammals and bitter taste in cruciferous vegetables." [PMID:11560911, PMID:18945935]


id: GO:0080037
name: negative regulation of cytokinin-activated signaling pathway
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of cytokinin signaling." [GOC:dhl, PMID:14973166]


id: GO:0080038
name: positive regulation of cytokinin-activated signaling pathway
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of cytokinin signaling." [GOC:dhl]


id: GO:0080039
name: xyloglucan endotransglucosylase activity
namespace: molecular_function
def:
  "Catalysis of the hydrolysis of a beta-(1,4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of a xyloglucan or an oligosaccharide of xyloglucan." [EC:2.4.1.207, GOC:ask, PMID:1400418, PMID:1554366]


id: GO:0080040
name: positive regulation of cellular response to phosphate starvation
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of cellular response to phosphate starvation." [PMID:18315545]


id: GO:0080043
name: quercetin 3-O-glucosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a glucosyl group from UDP-glucose to the 3-hydroxy group of a quercetin molecule." [PMID:15352060]


id: GO:0080044
name: quercetin 7-O-glucosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a glucosyl group from UDP-glucose to the 7-hydroxy group of a quercetin molecule." [PMID:15352060]


id: GO:0080045
name: quercetin 3'-O-glucosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a glucosyl group from UDP-glucose to the 3'-hydroxy group of a quercetin molecule." [PMID:15352060]


id: GO:0080046
name: quercetin 4'-O-glucosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a glucosyl group from UDP-glucose to the 4'-hydroxy group of a quercetin molecule." [PMID:15352060]


id: GO:0080049
name: L-gulono-1,4-lactone dehydrogenase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: L-gulono-1,4-lactone + 2 ferricytochrome c = L-ascorbate + 2 ferrocytochrome c." [PMID:18190525]


id: GO:0080051
name: cutin transport
namespace: biological_process
def:
  "The directed movement of cutin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cutin, which consists of C16-18 fatty acids, is the major component of the cuticle that covers the plant surface." [PMID:17951461]


id: GO:0080052
name: response to histidine
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histidine stimulus." [PMID:15889294]


id: GO:0080053
name: response to phenylalanine
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus." [PMID:15889294]


id: GO:0080054
name: low-affinity nitrate transmembrane transporter activity
namespace: molecular_function
def:
  "Enables the transfer of nitrate ions (NO3-) from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations." [PMID:19050168]


id: GO:0080055
name: low-affinity nitrate transport
namespace: biological_process
def:
  "The directed movement of nitrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations." [PMID:19050168]


id: GO:0080058
name: protein deglutathionylation
namespace: biological_process
def:
  "The protein modification process in which a glutathione molecule is removed from a protein amino acid by breaking a disulfide linkage." [GOC:tb]


id: GO:0080059
name: flavonol 3-O-arabinosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: UDP-arabinose + a flavonol = UDP + a flavonol 3-O-D-arabinoside." [PMID:18757557]


id: GO:0080060
name: integument development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the integument over time, from its formation to the mature structure. Integument is one of the layers of tissue that usually covers the ovule, enveloping the nucellus and forming the micropyle at the apex." [PMID:19054366, PO:0020021]


id: GO:0080061
name: indole-3-acetonitrile nitrilase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: indole-3-acetonitrile + 2 H2O = indole-3-acetic acid + NH3." [EC:3.5.5.1, MetaCyc:RXN-1404]


id: GO:0080062
name: cytokinin 9-beta-glucosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 6-alkylaminopurine + UDP-D-glucose = 6-alkylamino-9-beta-D-glucosylpurine + H+ + UDP. This reaction is an N-glucosylation event." [KEGG:R08369, PMID:15342621]


id: GO:0080064
name: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation
namespace: biological_process
def:
  "A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4,4-dimethyl-9beta,19-cyclopropylsterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy, 4-beta-methyl-9beta,19-cyclopropylsterol + 3 NADP+ + 3 H2O." [GOC:pr, PMID:14653780]


id: GO:0080065
name: 4-alpha-methyl-delta7-sterol oxidation
namespace: biological_process
def:
  "A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4-alpha-methyl-delta7-sterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy,delta7-sterol + 3 NADP+ + 3 H2O." [GOC:pr, PMID:14653780]


id: GO:0080066
name: 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 3-methylthiopropyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 3-methylthiopropyl-glucosinolate + adenosine 3',5'-bisphosphate." [PMID:19077143]


id: GO:0080067
name: 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 4-methylthiobutyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 4-methylthiobutyl-glucosinolate + adenosine 3',5'-bisphosphate." [PMID:19077143]


id: GO:0080068
name: 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 5-methylthiopentyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 5-methylthiopentyl-glucosinolate + adenosine 3',5'-bisphosphate." [PMID:19077143]


id: GO:0080069
name: 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 7-methylthioheptyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 7-methylthioheptyl-glucosinolate + adenosine 3',5'-bisphosphate." [PMID:19077143]


id: GO:0080070
name: 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 8-methylthiooctyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 8-methylthiooctyl-glucosinolate + adenosine 3',5'-bisphosphate." [PMID:19077143]


id: GO:0080071
name: indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: indol-3-yl-methyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = indol-3-yl-methyl-glucosinolate + adenosine 3',5'-bisphosphate." [PMID:19077143]


id: GO:0080072
name: spermidine:sinapoyl CoA N-acyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a sinapoyl group to a nitrogen atom on the spermidine molecule." [PMID:19077165]


id: GO:0080073
name: spermidine:coumaroyl CoA N-acyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a coumaroyl group to a nitrogen atom on the spermidine molecule." [PMID:19077165]


id: GO:0080074
name: spermidine:caffeoyl CoA N-acyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a caffeoyl group to a nitrogen atom on the spermidine molecule." [PMID:19077165]


id: GO:0080075
name: spermidine:feruloyl CoA N-acyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a feruloyl group to a nitrogen atom on the spermidine molecule." [PMID:19077165]


id: GO:0080076
name: caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a caffeoyl CoA molecule." [PMID:19077165]


id: GO:0080077
name: trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a trihydroxyferuloyl spermidine molecule." [PMID:19077165]


id: GO:0080078
name: tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a tricaffeoyl spermidine molecule." [PMID:19077165]


id: GO:0080081
name: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity
namespace: molecular_function
def:
  "Catalysis of the hydrolysis of glucosidic link in 4-methylumbelliferyl-beta-D-glucopyranoside." [PMID:15604686]


id: GO:0080084
name: 5S rDNA binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with the 5S rDNA sequence encoding ribosomal 5S rRNA, which is individually transcribed by RNA polymerase III, rather than by RNA polymerase I, in species where it exists." [PMID:12711688]


id: GO:0080085
name: signal recognition particle, chloroplast targeting
namespace: cellular_component
def:
  "A complex consisting of a protein and RNA component which binds the signal sequence of some proteins and facilitates their export to the chloroplast." [PMID:17513500]


id: GO:0080086
name: stamen filament development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the filament over time, from its formation to the mature structure. Filament is the stalk of a stamen." [PMID:19139039, PO:0009067]


id: GO:0080088
name: spermidine hydroxycinnamate conjugate biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of spermidine hydroxycinnamate conjugates." [PMID:19077165]


id: GO:0080089
name: sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a sinapoyl group to a nitrogen atom on the spermidine molecule." [PMID:19168716]


id: GO:0080090
name: regulation of primary metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism involving those compounds formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism." [PMID:19211694]


id: GO:0080091
name: regulation of raffinose metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving raffinose." [PMID:19211694]


id: GO:0080093
name: regulation of photorespiration
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of photorespiration. Photorespiration is a light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved." [GOC:tb]


id: GO:0080094
name: response to trehalose-6-phosphate
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus." [PMID:19193861]


id: GO:0080095
name: phosphatidylethanolamine-sterol O-acyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: a phosphatidylethanolamine + a sterol = a sterol ester + a lysophosphatidylethanolamine." [PMID:16020547]


id: GO:0080096
name: phosphatidate-sterol O-acyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: a phosphatidate + a sterol = a sterol ester + a lysophosphatidate." [PMID:16020547]


id: GO:0080097
name: L-tryptophan:pyruvate aminotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: L-tryptophan + pyruvate = 3-(indol-3-yl)pyruvate + L-alanine." [MetaCyc:RXN-10139]


id: GO:0080098
name: L-tyrosine:pyruvate aminotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: L-tyrosine + pyruvate = (4-hydroxyphenyl)pyruvate + L-alanine." [MetaCyc:RXN3O-4157]


id: GO:0080099
name: L-methionine:2-oxoglutarate aminotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: L-methionine + 2-oxoglutarate = 4-methylthio-2-oxobutyrate + L-glutamate." [PMID:18394996]


id: GO:0080100
name: L-glutamine:2-oxoglutarate aminotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: L-glutamine + 2-oxoglutarate = 2-oxoglutaramate + L-glutamate." [PMID:18394996]


id: GO:0080101
name: phosphatidyl-N-dimethylethanolamine N-methyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidyl-N-dimethylethanolamine = S-adenosyl-L-homocysteine + phosphatidylcholine." [EC:2.1.1.71, PMID:19366698]


id: GO:0080102
name: 3-methylthiopropyl glucosinolate S-oxygenase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 3-methylthiopropyl-glucosinolate = 3-methylsulfinylpropyl-glucosinolate." [PMID:18799661]


id: GO:0080103
name: 4-methylthiopropyl glucosinolate S-oxygenase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 4-methylthiopropyl-glucosinolate = 4-methylsulfinylpropyl-glucosinolate." [PMID:18799661]


id: GO:0080104
name: 5-methylthiopropyl glucosinolate S-oxygenase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 5-methylthiopropyl-glucosinolate = 5-methylsulfinylpropyl-glucosinolate." [PMID:18799661]


id: GO:0080105
name: 6-methylthiopropyl glucosinolate S-oxygenase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 6-methylthiopropyl-glucosinolate = 6-methylsulfinylpropyl-glucosinolate." [PMID:18799661]


id: GO:0080106
name: 7-methylthiopropyl glucosinolate S-oxygenase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 7-methylthiopropyl-glucosinolate = 7-methylsulfinylpropyl-glucosinolate." [PMID:18799661]


id: GO:0080107
name: 8-methylthiopropyl glucosinolate S-oxygenase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 8-methylthiopropyl-glucosinolate = 8-methylsulfinylpropyl-glucosinolate." [PMID:18799661]


id: GO:0080109
name: indole-3-acetonitrile nitrile hydratase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: indole-3-acetonitrile + H2O = indole-3-acetamide." [EC:4.2.1.84, MetaCyc:RXN-7567, PMID:11607511, PMID:12430025]


id: GO:0080110
name: sporopollenin biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of sporopollenin, a primary constituent of the pollen exine layer." [PMID:19218397]


id: GO:0080111
name: DNA demethylation
namespace: biological_process
def:
  "The removal of a methyl group from one or more nucleotides within an DNA molecule." [PMID:17208187]


id: GO:0080112
name: seed growth
namespace: biological_process
def:
  "The increase in size or mass of a seed. A seed is a propagating organ formed in the reproductive cycle of a spermatophyte, derived from the ovule and enclosing an embryo." [GOC:dhl, PO:0009010]


id: GO:0080113
name: regulation of seed growth
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of growth of the seed of an plant." [PMID:19141706]


id: GO:0080114
name: positive regulation of glycine hydroxymethyltransferase activity
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of glycine hydroxymethyltransferase activity, the catalysis of the reaction 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine." [EC:2.1.2.1, PMID:19223513]


id: GO:0080115
name: myosin XI tail binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with the tail region of a myosin XI heavy chain." [PMID:18703495]


id: GO:0080116
name: glucuronoxylan glucuronosyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the transfer of glucuronate to the xylan backbone of glucuronoxylan molecule." [PMID:18980649]


id: GO:0080117
name: secondary growth
namespace: biological_process
def:
  "Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of secondary vascular tissues by the vascular cambium." [ISBN:0471245208, PMID:19074290, PO:0005598, PO:0025004]


id: GO:0080118
name: brassinosteroid sulfotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: a brassinosteroid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated brassinosteroid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a brassinosteroid acceptor, producing the sulfated brassinosteroid derivative." [CHEBI:22921, PMID:10409637, PMID:17039368]


id: GO:0080119
name: ER body organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the formation of ER (endoplasmic reticulum) body. ER body is a compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have been found in Arabidopsis thaliana and related Brassicaceae species." [PMID:18780803, PMID:19147648]


id: GO:0080120
name: CAAX-box protein maturation
namespace: biological_process
def:
  "A series of specific posttranslational modifications to the CAAX box region of CAAX box proteins. CAAX box proteins are eukaryotic proteins that contain a CAAX motif where the C is a cysteine, the two A residues are aliphatic amino acids and the X can be one of several amino acids. The CAAX-box proteins undergo three sequential, enzymatic, post-translational modifications essential to their targeting: First, the proteins are prenylated by one of two prenyltransferases called farnesyltransferase and geranylgeranyltransferase-I. Prenylation results in the covalent attachment of either farnesyl or geranylgeranyl isoprenoid groups to the cysteine in the CAAX box motif. Prenylation is followed by proteolytic removal of the last three amino acids of the protein (AAX). Finally, the newly exposed carboxylate group of the isoprenylcysteine is methylated by an ER-associated prenyl-dependent carboxylmethyltransferase." [PMID:12039957, PMID:17114793, PMID:18641086]


id: GO:0080121
name: AMP transport
namespace: biological_process
def:
  "The directed movement of AMP, adenosine monophosphate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [PMID:18923018]


id: GO:0080122
name: AMP transmembrane transporter activity
namespace: molecular_function
def:
  "Enables the transfer of AMP, adenosine monophosphate, from one side of a membrane to the other." [PMID:18923018]


id: GO:0080123
name: jasmonate-amino synthetase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: jasmonate + an amino acid = an amide-linked jasmonyl-amino acid conjugate. The substrates of this reaction include non-standard amino acids, such as ACC (1-aminocyclopropane-1-carboxylate)." [PMID:15258265, PMID:17291501]


id: GO:0080125
name: multicellular structure septum development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the multicellular structure septum over time, from its formation to the mature structure. The multicellular structure septum is the thin partition or membrane that divides a cavity or a mass of tissue." [GOC:dhl]


id: GO:0080126
name: ovary septum development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the ovary septum over time, from its formation to the mature structure. The ovary septum is the thin partition that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s)." [PMID:17855426]


id: GO:0080127
name: fruit septum development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the fruit septum over time, from its formation to the mature structure. The fruit septum is a thin partition or membrane that divides a cavity or a mass of tissue in the fruit." [GOC:dhl, PO:0005008]


id: GO:0080128
name: anther septum development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the anther septum over time, from its formation to the mature structure. The anther septum is a thin partition or stretch of cells that are present in the anther dehiscence zone." [GOC:dhl, PO:0005010]


id: GO:0080129
name: proteasome core complex assembly
namespace: biological_process
def:
  "The aggregation, arrangement and bonding together of a mature, active 20S proteasome core particle complex that does not contain any regulatory particles." [PMID:12401807, PMID:17971041]


id: GO:0080130
name: L-phenylalanine:2-oxoglutarate aminotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = phenylpyruvate + L-glutamate." [GOC:pmn_curators, PMID:18394996]


id: GO:0080131
name: hydroxyjasmonate sulfotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: a hydroxyjasmonate + 3'-phosphoadenosine-5'-phosphosulfate = a hydroxyjasmonate sulfate + adenosine-3',5'-diphosphate." [EC:2.8.2.-, GOC:pmn_curators, MetaCyc:RXN-10451, MetaCyc:RXN-10453, PMID:12637544]


id: GO:0080132
name: fatty acid alpha-hydroxylase activity
namespace: molecular_function
def:
  "Catalysis of the conversion of a fatty acid to an alpha-hydroxylated fatty acid. A hydroxyl group is added to the second carbon, counted from the carboxyl end, of a fatty acid chain." [PMID:19054355]


id: GO:0080134
name: regulation of response to stress
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation)." [GOC:dhl]


id: GO:0080135
name: regulation of cellular response to stress
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of a cellular response to stress. Cellular response to stress is a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation)." [GOC:dhl]


id: GO:0080136
name: priming of cellular response to stress
namespace: biological_process
def:
  "The process that enables cells to respond in a more rapid and robust manner than nonprimed cells to much lower levels of a stimulus indicating the organism is under stress." [PMID:19318610]


id: GO:0080138
name: borate uptake transmembrane transporter activity
namespace: molecular_function
def:
  "Enables the transfer of borate from the outside of a cell to the inside of the cell across a membrane." [PMID:18603465]


id: GO:0080139
name: borate efflux transmembrane transporter activity
namespace: molecular_function
def:
  "Enables the transfer of borate from the inside of the cell to the outside of the cell across a membrane." [PMID:18603465]


id: GO:0080140
name: regulation of jasmonic acid metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving jasmonic acid." [GOC:dhl]


id: GO:0080141
name: regulation of jasmonic acid biosynthetic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of jasmonic acid." [GOC:dhl]


id: GO:0080142
name: regulation of salicylic acid biosynthetic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of salicylic acid." [GOC:dhl]


id: GO:0080143
name: regulation of amino acid export
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of amino acid export. Amino acid export is the directed movement of amino acids out of a cell or organelle." [PMID:20018597]


id: GO:0080144
name: amino acid homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of amino acid within an organism or cell." [PMID:19955263]


id: GO:0080145
name: cysteine homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of cysteine within an organism or cell." [PMID:19955263]


id: GO:0080146
name: L-cysteine desulfhydrase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: L-cysteine + H2O = ammonia + pyruvate + hydrogen sulfide + H+." [MetaCyc:LCYSDESULF-RXN, PMID:19955263]


id: GO:0080147
name: root hair cell development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of a root hair cell over time, from its formation to the mature state." [PMID:19675148]


id: GO:0080148
name: negative regulation of response to water deprivation
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of a response to water deprivation. Response to water deprivation is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water." [PMID:18835996]


id: GO:0080149
name: sucrose induced translational repression
namespace: biological_process
def:
  "Any process that stops, prevents or reduces the rate of translation as a result of increase in sucrose level." [PMID:19403731]


id: GO:0080150
name: S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: benzoate + S-adenosyl-L-methionine = methylbenzoate + S-adenosyl-L-homocysteine." [MetaCyc:RXN-6722, PMID:10852939]


id: GO:0080151
name: positive regulation of salicylic acid mediated signaling pathway
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of salicylic acid mediated signal transduction." [PMID:20181750]


id: GO:0080152
name: regulation of reductive pentose-phosphate cycle
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of reductive pentose-phosphate cycle." [PMID:17031544]


id: GO:0080153
name: negative regulation of reductive pentose-phosphate cycle
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of the reductive pentose-phosphate cycle." [PMID:17031544, PMID:20399532]


id: GO:0080154
name: regulation of fertilization
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy)." [GOC:DHL, PMID:20478994]


id: GO:0080155
name: regulation of double fertilization forming a zygote and endosperm
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of double fertilization forming a zygote and endosperm. Double fertilization forming a zygote and endosperm is a type of fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with the two polar nuclei to form the 3n primary endosperm nucleus and then develops into the endosperm. The ploidy level of the 2n zygote and 3n primary endosperm nucleus is determined by the ploidy level of the parents involved. An example of this component is found in Arabidopsis thaliana." [GOC:DHL, PMID:20478994]


id: GO:0080156
name: mitochondrial mRNA modification
namespace: biological_process
def:
  "The covalent alteration within the mitochondrion of one or more nucleotides within an mRNA to produce an mRNA molecule with a sequence that differs from that coded genetically." [PMID:20566637]


id: GO:0080157
name: regulation of plant-type cell wall organization or biogenesis
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving plant-type cell wall organization or biogenesis. Plant-type cell wall organization or biogenesis is a process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellulose- and pectin-containing cell wall." [PMID:20530756]


id: GO:0080158
name: chloroplast ribulose bisphosphate carboxylase complex biogenesis
namespace: biological_process
def:
  "A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a chloroplast ribulose bisphosphate carboxylase (RubisCO) complex. Includes the synthesis of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex." [PMID:20561259]


id: GO:0080159
name: zygote elongation
namespace: biological_process
def:
  "The process in which the zygote irreversibly increases in size in one dimension after fertilization. An example of such a process is found in Arabidopsis thaliana." [GOC:tb]


id: GO:0080160
name: selenate transport
namespace: biological_process
def:
  "The directed movement of selenate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [PMID:18761637]


id: GO:0080161
name: auxin transmembrane transporter activity
namespace: molecular_function
def:
  "Enables the transfer of auxins from one side of the membrane to the other. Auxins are plant hormones that regulate aspects of plant growth." [PMID:19506555]


id: GO:0080162
name: intracellular auxin transport
namespace: biological_process
def:
  "The directed movement of auxins within a cell. Auxins are a group of plant hormones that regulates aspects of plant growth." [PMID:19506555]


id: GO:0080163
name: regulation of protein serine/threonine phosphatase activity
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of protein serine/threonine phosphatase activity: catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate." [PMID:19407142]


id: GO:0080164
name: regulation of nitric oxide metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water." [GOC:DHL]


id: GO:0080165
name: callose deposition in phloem sieve plate
namespace: biological_process
def:
  "Any process in which callose is transported to, and/or maintained in, phloem sieve plate. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls." [PMID:19470642]


id: GO:0080166
name: stomium development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the stomium over time, from its formation to the mature structure. A stomium is a fissure or pore in the anther lobe through which the pollen is released." [GOC:tb]


id: GO:0080167
name: response to karrikin
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a karrikin stimulus. Karrikins are signaling molecules in smoke from burning vegetation that trigger seed germination for many angiosperms (flowering plants)." [PMID:20351290]


id: GO:0080168
name: abscisic acid transport
namespace: biological_process
def:
  "The directed movement of abscisic acid into, out of, within or between cells by means of some external agent such as a transporter or pore." [PMID:20133881]


id: GO:0080169
name: cellular response to boron-containing substance deprivation
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of boron obtained from boron-containing substances." [PMID:20059736]


id: GO:0080170
name: hydrogen peroxide transmembrane transport
namespace: biological_process
def:
  "The process in which hydrogen peroxide is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute." [GOC:tb]


id: GO:0080171
name: lytic vacuole organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lytic vacuole." [PMID:20729380]


id: GO:0080172
name: petal epidermis patterning
namespace: biological_process
def:
  "The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the cells in the petal epidermis." [GOC:tb]


id: GO:0080173
name: male-female gamete recognition during double fertilization
namespace: biological_process
def:
  "The initial contact step made between the male gamete and the female gamete during double fertilization. An example can be found in Arabidopsis thaliana." [PMID:21123745]


id: GO:0080175
name: phragmoplast microtubule organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in phragmoplast, a plant cell specific structure that forms during late cytokinesis. Phragmoplast serves as a scaffold for cell plate assembly and subsequent formation of a new cell wall separating the two daughter cells." [PMID:19383896]


id: GO:0080176
name: xyloglucan 1,6-alpha-xylosidase activity
namespace: molecular_function
def:
  "Catalysis of the hydrolysis of xyloglucan side chains so as to remove unsubstituted D-xylose residues attached to the glucose located at the non-reducing terminus." [PMID:20801759]


id: GO:0080177
name: plastoglobule organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plastoglobule. Plastoglobule is a lipoprotein particle present in chloroplasts. They are rich in non-polar lipids (triglycerides, esters) as well as in prenylquinones, plastoquinone and tocopherols. Plastoglobules are often associated with thylakoid membranes, suggesting an exchange of lipids with thylakoids." [PMID:20813909]


id: GO:0080182
name: histone H3-K4 trimethylation
namespace: biological_process
def:
  "The modification of histone H3 by addition of three methyl groups to lysine at position 4 of the histone." [GOC:BHF, GOC:se, GOC:tb]


id: GO:0080183
name: response to photooxidative stress
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a photooxidative stress, the light-dependent generation of active oxygen species. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism." [DOI:10.1111/j.1399-3054.1994.tb03042.x]


id: GO:0080184
name: response to phenylpropanoid
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a phenylpropanoid stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. A phenylpropanoid is any of secondary metabolites with structures based on a phenylpropane skeleton. The class includes phenylpropanoid esters, flavonoids, anthocyanins, coumarins and many small phenolic molecules. Phenylpropanoids are also precursors of lignin." [CHEBI:26004, GOC:tb]


id: GO:0080185
name: effector dependent induction by symbiont of host immune response
namespace: biological_process
def:
  "Any process that involves recognition of an effector, and by which an organism activates, maintains or increases the frequency, rate or extent of the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction. Effectors are proteins secreted into the host cell by pathogenic microbes, presumably to alter host immune response signaling. The best characterized effectors are bacterial effectors delivered into the host cell by type III secretion system (TTSS). Effector-triggered immunity (ETI) involves the direct or indirect recognition of an effector protein by the host (for example through plant resistance or R proteins) and subsequent activation of host immune response." [GOC:DHL, PMID:16497589]


id: GO:0080188
name: RNA-directed DNA methylation
namespace: biological_process
def:
  "An epigenetic RNA-based gene silencing process first elucidated in plants whereby 24-nt small interfering RNAs (siRNAs) guide DNA methyltransferases to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. In general this process consists of three phases: biogenesis of siRNAs, scaffold RNA production, and the formation of the guiding complex that recruits de novo DNA methyltransferases to the target loci." [PMID:21420348]


id: GO:0080189
name: primary growth
namespace: biological_process
def:
  "Growth of a plant structure from the time of its initiation by an apical meristem until its expansion is completed." [ISBN:0471245208]


id: GO:0080191
name: secondary thickening
namespace: biological_process
def:
  "Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from formation of tissue from a secondary thickening meristem." [ISBN:0080374903, JSTOR:4354165, PO:0025004, PO:0025414]


id: GO:0080192
name: primary thickening
namespace: biological_process
def:
  "Lateral growth of a plant axis (shoot axis or root) that is an increase in thickness resulting from the activity of a primary thickening meristem." [ISBN:0471245208, JSTOR:4354165, PO:0005039, PO:0025004]


id: GO:0080193
name: diffuse secondary thickening
namespace: biological_process
def:
  "Lateral growth of the older parts of a stem that occurs when the central parenchyma cells and the not yet fully differentiated fiber cells of the bundle sheaths continue to undergo cell division and expansion for a long period of time, leading to an increase in girth of the stem." [ISBN:0080374903]


id: GO:0085000
namespace: biological_process
name:
  modification by symbiont of host morphology or physiology via protein secreted by type V secretion system

def:
  "The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type V secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085001
name: formation by symbiont of stylet for nutrient acquisition from host
namespace: biological_process
def:
  "The assembly by a symbiont of a stylet, a hollow protrusible spear-like structure projected into the host cell for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085002
name: interaction with host mediated by secreted substance released by symbiont from symbiotic structure
namespace: biological_process
def:
  "An interaction with the host organism mediated by a symbiont secreted substance released by specialized structures generated in either organisms as a result of the symbiotic interaction. The term host is used for the larger (macro) of the two members of a symbiosis." [GOC:pamgo_curators]


id: GO:0085003
name: interaction with host via secreted substance released from stylet
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the stylet, a hollow protrusible spear-like structure in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085004
name: interaction with host via secreted substance released from haustorium
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the haustorium, a projection from a cell or tissue that penetrates the host's cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085005
name: interaction with host via secreted substance released from invasive hyphae
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance released by the other (symbiont) organism via invasive hyphae. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085006
namespace: biological_process
name:
  interaction with host mediated by symbiont secreted substance released from symbiont-containing vacuole

def:
  "An interaction with the host organism mediated by a substance released by the other (symbiont) organism via a symbiont-containing vacuole, a specialized sac within the host in which the symbiont resides. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085007
name: interaction with host via secreted substance released from rhoptry
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085008
name: interaction with host via secreted substance released from microneme
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the microneme, a small, elongated secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085009
name: interaction with host mediated by symbiont secreted substance released from Maurer's cleft
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance released by the other (symbiont) organism via Maurer's cleft. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085010
name: interaction with host mediated by secreted substance entering host via endocytosis
namespace: biological_process
def:
  "An interaction with the host organism mediated by a secreted substance from the symbiont entering host cells via endocytosis of the substance. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085011
name: interaction with host via protein secreted by Sec complex
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085012
name: interaction with host via protein secreted by Tat complex
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Tat complex. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085013
name: interaction with host via protein secreted by type VII secretion system
namespace: biological_process
def:
  "An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085015
name: dormancy maintenance of symbiont in host
namespace: biological_process
def:
  "Any process in which a dormant state is maintained by the symbiont within the host organism." [GOC:jl]


id: GO:0085016
name: dormancy exit of symbiont in host
namespace: biological_process
def:
  "Exit from dormant state, also known as resuscitation, of the symbiont within the host organism." [GOC:jl]


id: GO:0085017
name: symbiont entry into host cell forming a symbiont-containing vacuole
namespace: biological_process
def:
  "The invasion by a symbiont of a cell of its host organism, forming a vacuole in which the parasite resides. The vacuole membrane is formed from lipids and proteins derived from both host and symbiont. Begins when the symbiont attaches on to the host cell membrane which invaginates and deepens as the symbiont enters, and ends when the host cell membrane closes behind the newly-formed vacuole." [GOC:jl, PMID:18665841, PMID:8690024, PMID:9580555]


id: GO:0085018
name: maintenance of symbiont-containing vacuole by host
namespace: biological_process
def:
  "The process in which a host organism maintains the structure and function of a symbiont-containing vacuole. The symbiont-containing vacuole is a membrane-bounded vacuole within a host cell in which a symbiont organism resides, and can serve to reduce pathogenicity of invading symbionts by restricting them to the vacuolar compartment." [GOC:jl, GOC:yaf, PMID:18665841]


id: GO:0085019
name: formation by symbiont of a tubovesicular network for nutrient acquisition from host
namespace: biological_process
def:
  "The assembly of a symbiont-induced complex organelle that comprises of multiple protein and lipid domains for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085020
name: protein K6-linked ubiquitination
namespace: biological_process
def:
  "A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 6 of the ubiquitin monomers, is added to a protein. K6-linked ubiquitination is involved in DNA repair." [GOC:sp]


id: GO:0085021
namespace: biological_process
name:
  modification by symbiont of host morphology or physiology via protein secreted by type I secretion system

def:
  "The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type I secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085022
namespace: biological_process
name:
  modification by symbiont of host morphology or physiology via protein secreted by type VI secretion system

def:
  "The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type VI secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085023
namespace: biological_process
name:
  modification by symbiont of host morphology or physiology via protein secreted by type VII secretion system

def:
  "The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type VII secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085024
name: modification by symbiont of host morphology or physiology via protein secreted by Sec complex
namespace: biological_process
def:
  "The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Sec complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085025
name: modification by symbiont of host morphology or physiology via protein secreted by Tat complex
namespace: biological_process
def:
  "The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Tat complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085026
name: tubovesicular membrane network
namespace: cellular_component
def:
  "A complex, symbiont-induced host-derived organelle that is comprised of multiple protein and lipid domains." [GOC:pamgo_curators]


id: GO:0085027
name: entry into host via enzymatic degradation of host anatomical structure
namespace: biological_process
def:
  "Penetration by symbiont of a host anatomical structure which provides a barrier to symbiont entry, mediated by symbiont degradative enzymes." [GOC:pamgo_curators]


id: GO:0085028
name: entry into host via enzymatic degradation of host cuticle
namespace: biological_process
def:
  "Penetration by symbiont of host physical barriers, mediated by symbiont degradative enzymes." [GOC:pamgo_curators]


id: GO:0085030
name: mutualism
namespace: biological_process
def:
  "An interaction between two organisms living together in more or less intimate association in a relationship in which both organisms benefit from each other." [GOC:pamgo_curators]


id: GO:0085031
name: commensalism
namespace: biological_process
def:
  "An interaction between two organisms living together in more or less intimate association in a relationship in which one benefits and the other is unaffected." [GOC:pamgo_curators]


id: GO:0085032
name: modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
namespace: biological_process
def:
  "Any process in which an organism modulates the frequency, rate or extent of host NF-kappaB-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085033
name: positive regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of host NF-kappaB-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085034
name: negative regulation by symbiont of host I-kappaB kinase/NF-kappaB cascade
namespace: biological_process
def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of host NF-kappaB-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:pamgo_curators]


id: GO:0085035
name: haustorium
namespace: cellular_component
def:
  "A projection from a cell or tissue that penetrates the host's cell wall and invaginates the host cell membrane." [GOC:pamgo_curators]


id: GO:0085036
name: extrahaustorial matrix
namespace: cellular_component
def:
  "The space between the symbiont plasma membrane and the extrahaustorial membrane of the host." [GOC:pamgo_curators]


id: GO:0085037
name: extrahaustorial membrane
namespace: cellular_component
def:
  "The membrane surrounding the symbiont haustorium during symbiosis, derived from the host plasma membrane." [GOC:pamgo_curators]


id: GO:0085039
name: extra-invasive hyphal membrane
namespace: cellular_component
def:
  "A host-derived membrane surrounding the symbiont invasive hypha during symbiosis." [GOC:pamgo_curators]


id: GO:0085040
name: extra-invasive hyphal space
namespace: cellular_component
def:
  "The space between the symbiont plasma membrane and the extra-invasive hyphal membrane." [GOC:pamgo_curators]


id: GO:0085041
name: arbuscule
namespace: cellular_component
def:
  "Highly branched symbiont haustoria within host root cortex cells, responsible for nutrient exchange." [GOC:pamgo_curators]


id: GO:0085044
name: disassembly by symbiont of host cuticle
namespace: biological_process
def:
  "The process in which a symbiont organism effects a breakdown of the host organism cuticle. The host is defined as the larger of the organisms involved in a symbiotic interaction." [GOC:jl, GOC:pamgo_curators]


id: GO:0086001
name: cardiac muscle cell action potential
namespace: biological_process
def:
  "An action potential that occurs in a cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086002
name: cardiac muscle cell action potential involved in contraction
namespace: biological_process
def:
  "An action potential that occurs in a cardiac muscle cell and is involved in its contraction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086003
name: cardiac muscle cell contraction
namespace: biological_process
def:
  "The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086004
name: regulation of cardiac muscle cell contraction
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of cardiac muscle cell contraction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086005
name: ventricular cardiac muscle cell action potential
namespace: biological_process
def:
  "An action potential that occurs in a ventricular cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086006
name: voltage-gated sodium channel activity involved in cardiac muscle cell action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of a cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086007
name: voltage-gated calcium channel activity involved in cardiac muscle cell action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086008
namespace: molecular_function
name:
  voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization

def:
  "Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a cardiac muscle cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086009
name: membrane repolarization
namespace: biological_process
def:
  "The process in which ions are transported across a membrane such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086010
name: membrane depolarization during action potential
namespace: biological_process
def:
  "The process in which membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086011
name: membrane repolarization during action potential
namespace: biological_process
def:
  "The process in which ions are transported across a membrane such that the membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086012
name: membrane depolarization during cardiac muscle cell action potential
namespace: biological_process
def:
  "The process in which cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086013
name: membrane repolarization during cardiac muscle cell action potential
namespace: biological_process
def:
  "The process in which ions are transported across a membrane such that the cardiac muscle cell plasma membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086014
name: atrial cardiac muscle cell action potential
namespace: biological_process
def:
  "An action potential that occurs in an atrial cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086015
name: SA node cell action potential
namespace: biological_process
def:
  "An action potential that occurs in a sinoatrial node cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086016
name: AV node cell action potential
namespace: biological_process
def:
  "An action potential that occurs in an atrioventricular node cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086018
name: SA node cell to atrial cardiac muscle cell signalling
namespace: biological_process
def:
  "Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086019
name: cell-cell signaling involved in cardiac conduction
namespace: biological_process
def:
  "Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086020
namespace: molecular_function
name:
  gap junction channel activity involved in SA node cell-atrial cardiac muscle cell electrical coupling

def:
  "A wide pore channel activity that enables a direct cytoplasmic connection from an SA node cell to an atrial cardiomyocyte. The gap junction passes electrical signals between the cells contributing to cardiac conduction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086021
name: SA node cell to atrial cardiac muscle cell communication by electrical coupling
namespace: biological_process
def:
  "The process that mediates signaling interactions between an SA node cardiomyocyte and an atrial cardiomyocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086022
name: SA node cell-atrial cardiac muscle cell adhesion involved in cell communication
namespace: biological_process
def:
  "The attachment of SA node cardiomyocyte to an atrial cardiomyocyte via adhesion molecules that results in the cells being juxtaposed so that they can communicate." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086023
name: adrenergic receptor signaling pathway involved in heart process
namespace: biological_process
def:
  "A series of molecular signals beginning with a G-protein coupled adrenergic cell surface receptor combining with epinephrine or norepinephrine, which contributes to a circulatory system process carried out by the heart." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086024
name: adrenergic receptor signaling pathway involved in positive regulation of heart rate
namespace: biological_process
def:
  "An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of heart contraction. Binding of adrenalin or noradrenalin to a beta-adrenergic receptor on the surface of the signal-receiving cell results in the activation of an intracellular Gs protein. Gs activates adenylate cyclase to increase intracellular cyclic-AMP (cAMP) levels. cAMP binds directly to F-channels to allow an inward flow of sodium (known as funny current, or If current). The funny current is responsible for membrane depolarization and an increase in heart rate." [GOC:bf, GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:21099118]


id: GO:0086026
name: atrial cardiac muscle cell to AV node cell signaling
namespace: biological_process
def:
  "Any process that mediates the transfer of information from an atrial cardiomyocyte to an AV node cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086027
name: AV node cell to bundle of His cell signaling
namespace: biological_process
def:
  "Any process that mediates the transfer of information from an AV node cardiac muscle cell to a bundle of His cardiomyocyte." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086028
name: bundle of His cell to Purkinje myocyte signaling
namespace: biological_process
def:
  "Any process that mediates the transfer of information from a bundle of His cardiomyocyte to a Purkinje myocyte." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086029
name: Purkinje myocyte to ventricular cardiac muscle cell signaling
namespace: biological_process
def:
  "Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086030
name: adrenergic receptor signaling pathway involved in cardiac muscle relaxation
namespace: biological_process
def:
  "An adrenergic receptor signaling pathway that contributes to a reduction in cardiac muscle contraction. Beta-adrenergic receptor-induced cardiac relaxation is achieved by a GPCR-activated adenylate cyclase generating cAMP; cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the sarcoplasmic reticulum (SR) membrane protein PLB. In its non-phosphorylated state, PLB acts as an inhibitor of the ATPase Ca(2+) pump of the cardiac SR (SERCA2a); inhibition of the pump is relieved upon phosphorylation. The pump removes Ca(2+) from the cytoplasm, thereby preventing cytosolic Ca(2+)-dependent activation of contractile proteins, leading to enhanced muscle relaxation." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:10571541]


id: GO:0086033
namespace: biological_process
name:
  G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate

def:
  "A G-protein coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction. Binding of acetylcholine to a G-protein coupled (muscarinic) receptor on the surface of the signal-receiving cell results in the alpha subunit of a coupled G-protein binding to GTP. This results in the separation of the beta-gamma complex from the alpha subunit. Both the alpha subunit, and the beta-gamma complex can continue to signal to bring about membrane hyperpolarization and a reduction in heart rate." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, Wikipedia:G_protein-gated_ion_channel]


id: GO:0086036
name: regulation of cardiac muscle cell membrane potential
namespace: biological_process
def:
  "Any process that modulates the establishment or extent of a membrane potential in a cardiac muscle cell (a cardiomyocyte). A membrane potential is the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086037
namespace: molecular_function
name:
  sodium:potassium-exchanging ATPase activity involved in regulation of cardiac muscle cell membrane potential

def:
  "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in), that contributes to regulating the membrane potential of a cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086038
name: calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential
namespace: molecular_function
def:
  "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in), which contributes to regulating the membrane potential of a cardiac muscle cell." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086039
namespace: molecular_function
name:
  calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential

def:
  "Catalysis of the transfer of a solute or solutes from one side of a cardiac muscle cell plasma membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans). The transfer contributes to the regulation of the plasma membrane potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086040
name: sodium:proton antiporter activity involved in regulation of cardiac muscle cell membrane potential
namespace: molecular_function
def:
  "Catalysis of the transfer of a solute or solutes from one side of a cardiac muscle cell membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out). This transfer contributes to the regulation of the cardiac muscle cell plasma membrane potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086041
name: voltage-gated potassium channel activity involved in SA node cell action potential depolarization
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of an SA node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086042
name: cardiac muscle cell-cardiac muscle cell adhesion
namespace: biological_process
def:
  "The attachment of one cardiomyocyte to another cardiomyocyte via adhesion molecules." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086044
name: atrial cardiac muscle cell to AV node cell communication by electrical coupling
namespace: biological_process
def:
  "The process that mediates signaling interactions between an atrial cardiomyocyte and an AV node cell by transfer of current between their adjacent cytoplasms via intercellular protein channels." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086045
name: membrane depolarization during AV node cell action potential
namespace: biological_process
def:
  "The process in which AV node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086046
name: membrane depolarization during SA node cell action potential
namespace: biological_process
def:
  "The process in which SA node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086047
name: membrane depolarization during Purkinje myocyte cell action potential
namespace: biological_process
def:
  "The process in which Purkinje myocyte membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086048
name: membrane depolarization during bundle of His cell action potential
namespace: biological_process
def:
  "The process in which bundle of His cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086049
name: membrane repolarization during AV node cell action potential
namespace: biological_process
def:
  "The process in which ions are transported across a membrane such that the AV node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential." [GOC:BHF, GOC:dph, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086050
name: membrane repolarization during bundle of His cell action potential
namespace: biological_process
def:
  "The process in which ions are transported across a membrane such that the bundle of His cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential." [GOC:BHF, GOC:dph, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086051
name: membrane repolarization during Purkinje myocyte action potential
namespace: biological_process
def:
  "The process in which ions are transported across a membrane such that the Purkinje myocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential." [GOC:BHF, GOC:dph, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086052
name: membrane repolarization during SA node cell action potential
namespace: biological_process
def:
  "The process in which an SA node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential." [GOC:BHF, GOC:dph, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086053
name: AV node cell to bundle of His cell communication by electrical coupling
namespace: biological_process
def:
  "The process that mediates signaling interactions between an AV node cardiomyocyte and a bundle of His cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels." [GOC:BHF, GOC:dph, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086054
name: bundle of His cell to Purkinje myocyte communication by electrical coupling
namespace: biological_process
def:
  "The process that mediates signaling interactions between a bundle of His cardiac muscle cell and a Purkinje myocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086055
name: Purkinje myocyte to ventricular cardiac muscle cell communication by electrical coupling
namespace: biological_process
def:
  "The process that mediates signaling interactions between a Purkinje myocyte and a ventricular cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086056
name: voltage-gated calcium channel activity involved in AV node cell action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an AV node cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086057
name: voltage-gated calcium channel activity involved in bundle of His cell action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a bundle of His cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086058
name: voltage-gated calcium channel activity involved in Purkinje myocyte cell action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an Purkinje myocyte cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086059
name: voltage-gated calcium channel activity involved SA node cell action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an SA node cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086060
name: voltage-gated sodium channel activity involved in AV node cell action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of an AV node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086061
name: voltage-gated sodium channel activity involved in bundle of His cell action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of a bundle of His cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086062
name: voltage-gated sodium channel activity involved in Purkinje myocyte action potential
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of a Purkinje myocyte contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086064
name: cell communication by electrical coupling involved in cardiac conduction
namespace: biological_process
def:
  "The process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels and contributes to the process of cardiac conduction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086065
name: cell communication involved in cardiac conduction
namespace: biological_process
def:
  "Any process that mediates interactions between a cell and its surroundings that contributes to the process of cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086066
name: atrial cardiac muscle cell to AV node cell communication
namespace: biological_process
def:
  "The process that mediates interactions between an atrial cardiomyocyte and its surroundings that contributes to the process of the atrial cardiomyocyte communicating with an AV node cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086067
name: AV node cell to bundle of His cell communication
namespace: biological_process
def:
  "The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086068
name: Purkinje myocyte to ventricular cardiac muscle cell communication
namespace: biological_process
def:
  "The process that mediates interactions between a Purkinje myocyte and its surroundings that contributes to the process of the Purkinje myocyte communicating with a ventricular cardiac muscle cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086069
name: bundle of His cell to Purkinje myocyte communication
namespace: biological_process
def:
  "The process that mediates interactions between a bundle of His cell and its surroundings that contributes to the process of the bundle of His cell communicating with a Purkinje myocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086070
name: SA node cell to atrial cardiac muscle cell communication
namespace: biological_process
def:
  "The process that mediates interactions between an SA node cardiomyocyte and its surroundings that contributes to the process of the SA node cardiomyocyte communicating with an atrial cardiomyocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086071
name: atrial cardiac muscle cell-AV node cell adhesion involved in cell communication
namespace: biological_process
def:
  "The attachment of an atrial cardiomyocyte to an AV node cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086072
name: AV node cell-bundle of His cell adhesion involved in cell communication
namespace: biological_process
def:
  "The attachment of an AV node cell to an bundle of His cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086073
name: bundle of His cell-Purkinje myocyte adhesion involved in cell communication
namespace: biological_process
def:
  "The attachment of a bundle of His cell to a Purkinje myocyte via adhesion molecules that results in the cells being juxtaposed so that they can communicate." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086074
name: Purkinje myocyte-ventricular cardiac muscle cell adhesion involved in cell communication
namespace: biological_process
def:
  "The attachment of an Purkinje myocyte to a ventricular cardiac muscle cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086075
name: gap junction channel activity involved in cardiac conduction electrical coupling
namespace: molecular_function
def:
  "A wide pore channel activity that enables a direct cytoplasmic connection from one cardiomyocyte to an adjacent cardiomyocyte. The gap junction passes electrical signals between the cells contributing to cardiac conduction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086076
namespace: molecular_function
name:
  gap junction channel activity involved in atrial cardiac muscle cell-AV node cell electrical coupling

def:
  "A wide pore channel activity that enables a direct cytoplasmic connection from an atrial cardiomyocyte to an AV node cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086077
name: gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling
namespace: molecular_function
def:
  "A wide pore channel activity that enables a direct cytoplasmic connection from an AV node cell to a bundle of His cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086078
name: gap junction channel activity involved in bundle of His cell-Purkinje myocyte electrical coupling
namespace: molecular_function
def:
  "A wide pore channel activity that enables a direct cytoplasmic connection from a bundle of His cell to a Purkinje myocyte. The gap junction passes electrical signals between the cells contributing to cardiac conduction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086079
namespace: molecular_function
name:
  gap junction channel activity involved in Purkinje myocyte-ventricular cardiac muscle cell electrical coupling

def:
  "A wide pore channel activity that enables a direct cytoplasmic connection from a Purkinje myocyte to a ventricular cardiac muscle cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086080
name: protein binding involved in heterotypic cell-cell adhesion
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with any protein or protein complex contributing to the adhesion of two different types of cells." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086081
name: cell adhesive protein binding involved in atrial cardiac muscle cell-AV node cell communication
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with any protein or protein complex that results in the connection of an atrial cardiomyocyte with an AV node cell and contributes to the communication between the two cells." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086082
name: cell adhesive protein binding involved in AV node cell-bundle of His cell communication
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with any protein or protein complex that results in the connection of an AV node cell with a bundle of His cell and contributes to the communication between the two cells." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086083
name: cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with any protein or protein complex that results in the connection of a bundle of His cell with a Purkinje myocyte and contributes to the communication between the two cells." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086084
namespace: molecular_function
name:
  cell adhesive protein binding involved in Purkinje myocyte-ventricular cardiac muscle cell communication

def:
  "Interacting selectively and non-covalently with any protein or protein complex that results in the connection of a Purkinje myocyte with an ventricular cardiac muscle cell and contributes to the communication between the two cells." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086085
namespace: molecular_function
name:
  cell adhesive protein binding involved in SA cardiac muscle cell-atrial cardiac muscle cell communication

def:
  "Interacting selectively and non-covalently with any protein or protein complex that results in the connection of an SA cardiomyocyte with an atrial cardiomyocyte and contributes to the communication between the two cells." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086086
name: voltage-gated potassium channel activity involved in AV node cell action potential repolarization
namespace: molecular_function
def:
  "Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an AV node cardiac muscle cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086087
namespace: molecular_function
name:
  voltage-gated potassium channel activity involved in bundle of His cell action potential repolarization

def:
  "Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a bundle of His cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086088
namespace: molecular_function
name:
  voltage-gated potassium channel activity involved in Purkinje myocyte action potential repolarization

def:
  "Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a Purkinje myocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086089
namespace: molecular_function
name:
  voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization

def:
  "Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an atrial cardiomyocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086090
name: voltage-gated potassium channel activity involved in SA node cell action potential repolarization
namespace: molecular_function
def:
  "Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086091
name: regulation of heart rate by cardiac conduction
namespace: biological_process
def:
  "A cardiac conduction process that modulates the frequency or rate of heart contraction." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086092
name: regulation of the force of heart contraction by cardiac conduction
namespace: biological_process
def:
  "A cardiac conduction process that modulates the extent of heart contraction, changing the force with which blood is propelled." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086093
name: G-protein coupled acetylcholine receptor signaling pathway involved in involved in heart process
namespace: biological_process
def:
  "A G-protein coupled acetylcholine receptor signaling pathway, which contributes to a circulatory system process carried out by the heart." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086094
namespace: biological_process
name:
  positive regulation of ryanodine-sensitive calcium-release channel activity by adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction

def:
  "An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of cardiac muscle contraction through phosphorylation and enhancement of the ryanodine receptor, a calcium-activated calcium-release channel found in the membrane of the sarcoplasmic reticulum. An adrenergic receptor-activated adenylate cyclase generates cAMP. cAMP then activates the cAMP-dependent protein kinase A (PKA), which phosphorylates the ryanodine receptor (RyR). PKA-phosphorylation of RyR enhances channel activity by sensitizing the channel to cytosolic calcium. Cytosolic calcium stimulates contractile proteins to promote muscle contraction." [GOC:bf, GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:21099118]


id: GO:0086095
namespace: biological_process
name:
  positive regulation of IKACh channel activity by G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate

def:
  "A G-protein coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction through activation of the IKACh potassium channel. Binding of acetylcholine to a G-protein coupled acetylcholine receptor (muscarinic receptor) on the surface of the signal-receiving cell results in liberation of the G-beta/gamma complex from the alpha subunit. The G-beta/gamma complex binds directly to the inward-rectifying potassium channel IKACh. Once the ion channel is activated, potassium ions (K+) flow out of the cell and cause it to hyperpolarize. In its hyperpolarized state, action potentials cannot be fired as quickly as possible, which slows the heart rate." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, Wikipedia:G_protein-gated_ion_channel]


id: GO:0086096
name: adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process
namespace: biological_process
def:
  "An adrenergic receptor signaling pathway which contributes to a circulatory system process carried out by the heart, where the activated adrenergic receptor transmits the signal by Gi-mediated inhibition of adenylate cyclase activity." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:10571541]


id: GO:0086097
name: phospholipase C-activating angiotensin-activated signaling pathway
namespace: biological_process
def:
  "An angiotensin-mediated signaling pathway where the activated receptor transmits the signal via Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol-1,4,5,-triphosphate (IP3) and diacylglycerol (DAG). DAG activates protein kinase C (PKC), whilst IP3 binds intracellular receptors to induce the release of Ca2+ from intracellular stores." [GOC:bf, GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086098
name: angiotensin-activated signaling pathway involved in heart process
namespace: biological_process
def:
  "An angiotensin receptor signaling pathway which contributes to a circulatory system process carried out by the heart." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:17376402]


id: GO:0086099
name: phospholipase C-activating angiotensin-activated signaling pathway involved in heart process
namespace: biological_process
def:
  "An angiotensin-mediated signaling pathway that contributes to a circulatory system process carried out by the heart, where the activated receptor transmits the signal via Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol-1,4,5,-triphosphate (IP3) and diacylglycerol (DAG). DAG activates protein kinase C (PKC), whilst IP3 binds intracellular receptors to induce the release of Ca2+ from intracellular stores." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:17376402]


id: GO:0086100
name: endothelin receptor signaling pathway
namespace: biological_process
def:
  "A series of molecular signals initiated by an endothelin receptor binding to one of its physiological ligands, and proceeding with the activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. Ends with regulation of a downstream cellular process, e.g. transcription." [GOC:bf, GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:10977869]


id: GO:0086101
name: endothelin receptor signaling pathway involved in heart process
namespace: biological_process
def:
  "An endothelin receptor signaling pathway which contributes to a circulatory system process carried out by the heart." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:17376402]


id: GO:0086102
namespace: biological_process
name:
  adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate

def:
  "A G-protein coupled acetylcholine receptor signaling pathway that contributes to an decrease in frequency or rate of heart contraction through inhibition of adenylate cyclase (AC) activity. Binding of acetylcholine to a G-protein coupled (muscarinic) receptor on the surface of the signal-receiving cell results in the activation of an intracellular Gi/o protein. Gi/o inhibits adenylate cyclase to decrease cyclic-AMP (cAMP) levels. Since cAMP binds directly to F-channels to allow an inward flow of sodium (funny current, If current), a reduction in cAMP reduces the funny current to bring about membrane hyperpolarization and a decrease in heart rate." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11]


id: GO:0086103
name: G-protein coupled receptor signaling pathway involved in heart process
namespace: biological_process
def:
  "An G-protein coupled receptor signaling pathway which contributes to a circulatory system process carried out by the heart." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, PMID:17376402]


id: GO:0089700
name: protein kinase D signaling
namespace: biological_process
def:
  "A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase D, which occurs as a result of a single trigger reaction or compound." [GOC:BHF, GOC:dos, GOC:mah]


id: GO:0089701
name: U2AF
namespace: cellular_component
def:
  "A heterodimeric protein complex consisting of conserved large and small U2AF subunits that contributes to spliceosomal RNA splicing by binding to consensus sequences at the 3' splice site. U2AF is required to stabilize the association of the U2 snRNP with the branch point." [GOC:dos, GOC:mah, PMID:15231733, PMID:1538748, PMID:2963698, PMID:8657565]


id: GO:0089702
name: undecaprenyl-phosphate glucose phosphotransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: UDP-glucose + ditrans,octacis-undecaprenyl phosphate = UMP + alpha-D-glucopyranosyl-diphospho-ditrans,octacis-undecaprenol." [EC:2.7.8.31, GOC:dos, GOC:imk]


id: GO:0089703
name: L-aspartate transmembrane export from vacuole
namespace: biological_process
def:
  "The directed movement of L-aspartate out of the vacuole, across the vacuolar membrane." [PMID:21307582]


id: GO:0089704
name: L-glutamate transmembrane export from vacuole
namespace: biological_process
def:
  "The directed movement of L-glutamate out of the vacuole, across the vacuolar membrane." [PMID:21307582]


id: GO:0089705
name: protein localization to outer membrane
namespace: biological_process
def:
  "A process in which a protein is transported to, or maintained in, a specific location the cell outer membrane." [GOC:dos, PMID:12823819]


id: GO:0089706
name: L-ornithine transmembrane export from vacuole
namespace: biological_process
def:
  "The directed movement of L-ornithine out of the vacuole, across the vacuolar membrane." [PMID:21307582]


id: GO:0089707
name: L-lysine transmembrane export from vacuole
namespace: biological_process
def:
  "The directed movement of L-lysine out of the vacuole, across the vacuolar membrane." [PMID:21307582]


id: GO:0089708
name: L-histidine transmembrane export from vacuole
namespace: biological_process
def:
  "The directed movement of L-histidine out of the vacuole, across the vacuolar membrane." [PMID:21307582]


id: GO:0089710
name: endocytic targeting sequence binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits." [PMID:8918456]


id: GO:0089713
name: Cbf1-Met4-Met28 complex
namespace: cellular_component
def:
  "A heteromeric complex consisting of Cbf1 and basic leucine zipper (bZIP) containing transcriptional activators, Met4 and Met28, that forms over the sequence TCACGTG in the upstream activating sequence (UAS) of genes involved in sulfur amino acid metabolism, resulting in their transcriptional activation." [PMID:8665859, PMID:9171357]


id: GO:0089714
name: UDP-N-acetyl-D-mannosamine dehydrogenase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: UDP-N-acetyl-alpha-D-mannosamine + 2 NAD+ + H2O = UDP-N-acetyl-alpha-D-mannosaminuronate + 2 NADH + 2 H+." [EC:1.1.1.336]


id: GO:0089715
name: tRNA m6t6A37 methyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing N6-threonylcarbamoyladenosine = S-adenosyl-L-homocysteine + tRNA containing N6-methylthreonylcarbamoyladenosine." [PMID:25063302]


id: GO:0089716
name: Pip2-Oaf1 complex
namespace: cellular_component
def:
  "A heterodimeric complex consisting of Zn(2)Cys(6) containing transcription factors Pip2 and Oaf1. It binds to the oleate response element (ORE), found in the promoters of fatty acid-inducible genes in Saccharomyces where, in the presence of oleate this bound complex activates the transcription of genes encoding peroxisomal proteins." [PMID:8972187, PMID:9288897]


id: GO:0089717
name: spanning component of membrane
namespace: cellular_component
def:
  "The component of a membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane." [GOC:dos]


id: GO:0089718
name: amino acid import across plasma membrane
namespace: biological_process
def:
  "The directed movement of an amino acid from outside of a cell, across the plasma membrane and into the cytosol." [GOC:krc, PMID:8195186]


id: GO:0089719
name: RHG protein domain binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with an RHG (reaper/hid/grimm) domain/motif (AKA iap binding motif)." [GOC:dos, GOC:ha]


id: GO:0090001
name: replication fork arrest at tRNA locus
namespace: biological_process
def:
  "A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the eukaryotic tRNA transcription unit." [GOC:dph, GOC:tb]


id: GO:0090002
name: establishment of protein localization to plasma membrane
namespace: biological_process
def:
  "The directed movement of a protein to a specific location in the plasma membrane." [GOC:dph, GOC:tb]


id: GO:0090003
name: regulation of establishment of protein localization to plasma membrane
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location in the plasma membrane." [GOC:dph, GOC:tb]


id: GO:0090004
name: positive regulation of establishment of protein localization to plasma membrane
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of the directed movement of a protein to a specific location in the plasma membrane." [GOC:dph, GOC:tb]


id: GO:0090005
name: negative regulation of establishment of protein localization to plasma membrane
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the directed movement of a protein to a specific location in the plasma membrane." [GOC:dph, GOC:tb]


id: GO:0090006
name: regulation of linear element assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of linear element assembly. Linear element assembly is the cell cycle process in which a proteinaceous scaffold, related to the synaptonemal complex, is assembled in association with S. pombe chromosomes during meiotic prophase." [GOC:tb]


id: GO:0090007
name: obsolete regulation of mitotic anaphase
namespace: biological_process
def:
  "OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic anaphase, a cell cycle process comprising the steps by which a cell progresses through anaphase, the stage of mitosis during which the two sets of chromosomes separate and move away from each other." [GOC:tb]


id: GO:0090008
name: hypoblast development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the hypoblast over time, from its formation to the mature structure. The hypoblast is a tissue formed from the inner cell mass that lies beneath the epiblast and gives rise to extraembryonic endoderm." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090009
name: primitive streak formation
namespace: biological_process
def:
  "The developmental process pertaining to the initial formation of the primitive streak from unspecified parts. The primitive streak is a ridge of cells running along the midline of the embryo where the mesoderm ingresses. It defines the anterior-posterior axis." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090010
name: transforming growth factor beta receptor signaling pathway involved in primitive streak formation
namespace: biological_process
def:
  "A series of molecular signals initiated by the binding of an extracellular ligand to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the formation of the primitive streak." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090011
name: Wnt signaling pathway involved in primitive streak formation
namespace: biological_process
def:
  "The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes that contribute to the formation of the primitive streak." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090012
namespace: biological_process
name:
  negative regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation

def:
  "Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090013
namespace: biological_process
name:
  regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation

def:
  "Any process that modulates the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090014
name: leaflet formation
namespace: biological_process
def:
  "The developmental process pertaining to the initial formation of a leaflet from unspecified parts. A leaflet is one of the ultimate segments of a compound leaf." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090015
name: positive regulation of leaflet formation by auxin mediated signaling pathway
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of leaflet formation as a result of the series of molecular signals generated in response to detection of auxin." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090016
name: regulation of leaflet formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of leaflet formation." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090017
name: anterior neural plate formation
namespace: biological_process
def:
  "The formation of anterior end of the flat, thickened layer of ectodermal cells known as the neural plate." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090018
name: posterior neural plate formation
namespace: biological_process
def:
  "The formation of posterior end of the flat, thickened layer of ectodermal cells known as the neural plate." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090019
name: regulation of transcription involved in anterior neural plate formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter contributing to the formation of the anterior neural plate." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090020
name: regulation of transcription involved in posterior neural plate formation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter contributing to the formation of the posterior neural plate." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090021
name: positive regulation of posterior neural plate formation by Wnt signaling pathway
namespace: biological_process
def:
  "The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and increasing the rate or extent of posterior neural plate formation." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090022
name: regulation of neutrophil chemotaxis
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding." [GOC:dph, GOC:tb]


id: GO:0090023
name: positive regulation of neutrophil chemotaxis
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding." [GOC:dph, GOC:tb]


id: GO:0090024
name: negative regulation of neutrophil chemotaxis
namespace: biological_process
def:
  "Any process that decreases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding." [GOC:dph, GOC:tb]


id: GO:0090025
name: regulation of monocyte chemotaxis
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of monocyte chemotaxis." [GOC:dph, GOC:tb]


id: GO:0090026
name: positive regulation of monocyte chemotaxis
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of monocyte chemotaxis." [GOC:dph, GOC:tb]


id: GO:0090027
name: negative regulation of monocyte chemotaxis
namespace: biological_process
def:
  "Any process that decreases the frequency, rate, or extent of monocyte chemotaxis." [GOC:dph, GOC:tb]


id: GO:0090028
namespace: biological_process
name:
  positive regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion

def:
  "Any process that increases the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion." [GOC:dph, GOC:tb]


id: GO:0090029
namespace: biological_process
name:
  negative regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion

def:
  "Any process that decreases the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion." [GOC:dph, GOC:tb]


id: GO:0090030
name: regulation of steroid hormone biosynthetic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones." [GOC:dph, GOC:tb]


id: GO:0090031
name: positive regulation of steroid hormone biosynthetic process
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones." [GOC:dph, GOC:tb]


id: GO:0090032
name: negative regulation of steroid hormone biosynthetic process
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones." [GOC:dph, GOC:tb]


id: GO:0090033
name: positive regulation of filamentous growth
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of the process in which a multicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape." [GOC:dph, GOC:tb]


id: GO:0090034
name: regulation of chaperone-mediated protein complex assembly
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090035
name: positive regulation of chaperone-mediated protein complex assembly
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090036
name: regulation of protein kinase C signaling
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound." [GOC:dph, GOC:tb]


id: GO:0090037
name: positive regulation of protein kinase C signaling
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound." [GOC:dph, GOC:tb]


id: GO:0090038
name: negative regulation of protein kinase C signaling
namespace: biological_process
def:
  "Any process that decreases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound." [GOC:dph, GOC:tb]


id: GO:0090042
name: tubulin deacetylation
namespace: biological_process
def:
  "The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090043
name: regulation of tubulin deacetylation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of tubulin deacetylation. Tubulin deacetylation is the removal of an acetyl group from a protein amino acid." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090044
name: positive regulation of tubulin deacetylation
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of tubulin deacetylation. Tubulin deacetylation is the removal of an acetyl group from a protein amino acid." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090045
name: positive regulation of deacetylase activity
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of deacetylase activity, the catalysis of the hydrolysis of an acetyl group or groups from a substrate molecule." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090046
name: obsolete regulation of transcription regulator activity
namespace: biological_process
def:
  "OBSOLETE. Any process that modulates the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor." [GOC:BHF, GOC:rl]


id: GO:0090047
name: obsolete positive regulation of transcription regulator activity
namespace: biological_process
def:
  "OBSOLETE. Any process that increases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor." [GOC:BHF, GOC:rl]


id: GO:0090048
name: obsolete negative regulation of transcription regulator activity
namespace: biological_process
def:
  "OBSOLETE. Any process that decreases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor." [GOC:BHF, GOC:rl]


id: GO:0090049
name: regulation of cell migration involved in sprouting angiogenesis
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis." [GOC:BHF, GOC:dph, GOC:rl, GOC:tb]


id: GO:0090050
name: positive regulation of cell migration involved in sprouting angiogenesis
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis." [GOC:BHF, GOC:dph, GOC:rl, GOC:tb]


id: GO:0090051
name: negative regulation of cell migration involved in sprouting angiogenesis
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis." [GOC:BHF, GOC:dph, GOC:rl, GOC:tb]


id: GO:0090052
name: regulation of chromatin silencing at centromere
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of chromatin silencing at the centromere. Chromatin silencing at the centromere is the repression of transcription of centromeric DNA by altering the structure of chromatin." [GOC:dph, GOC:tb]


id: GO:0090053
name: positive regulation of chromatin silencing at centromere
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of chromatin silencing at the centromere. Chromatin silencing at the centromere is the repression of transcription of centromeric DNA by altering the structure of chromatin." [GOC:dph, GOC:tb]


id: GO:0090054
name: regulation of chromatin silencing at silent mating-type cassette
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of chromatin silencing at silent mating-type cassette. Chromatin silencing at silent mating-type cassette is the repression of transcription at silent mating-type loci by altering the structure of chromatin." [GOC:dph, GOC:tb]


id: GO:0090055
name: positive regulation of chromatin silencing at silent mating-type cassette
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of chromatin silencing at silent mating-type cassette. Chromatin silencing at silent mating-type cassette is the repression of transcription at silent mating-type loci by altering the structure of chromatin." [GOC:dph, GOC:tb]


id: GO:0090056
name: regulation of chlorophyll metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chlorophyll." [GOC:dph, GOC:tb]


id: GO:0090057
name: root radial pattern formation
namespace: biological_process
def:
  "The radial pattern formation process that results in the formation of the different tissues of the root around its radial axis." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090058
name: metaxylem development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxylem and before the secondary xylem, if any of the latter is formed." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090059
name: protoxylem development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the protoxylem over time, from its formation to the mature structure. The protoxylem comprises the first formed elements of the primary xylem." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090060
name: regulation of metaxylem development
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of metaxylem development. Metaxylem development is the process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxylem and before the secondary xylem, if any of the latter is formed." [GOC:dph, GOC:sdb_2009, GOC:tb]


id: GO:0090062
name: regulation of trehalose metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of trehalose metabolism, the chemical reactions and pathways involving trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi." [GOC:dph, GOC:tb]


id: GO:0090063
name: positive regulation of microtubule nucleation
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell." [GOC:dph, GOC:tb]


id: GO:0090064
name: activation of microtubule nucleation
namespace: biological_process
def:
  "Any process that starts the inactive process of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell." [GOC:dph, GOC:tb]


id: GO:0090065
name: regulation of production of siRNA involved in RNA interference
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the production of siRNA, the cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference." [GOC:dph, GOC:mah, GOC:tb]


id: GO:0090067
name: regulation of thalamus size
namespace: biological_process
def:
  "Any process that modulates the size of the thalamus. The thalamus is a part of the diencephalon that is composed of the dorsal thalamus and the ventral thalamus." [GOC:dph, GOC:tb]


id: GO:0090068
name: positive regulation of cell cycle process
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events." [GOC:dph, GOC:tb]


id: GO:0090069
name: regulation of ribosome biogenesis
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits." [GOC:dph, GOC:tb]


id: GO:0090070
name: positive regulation of ribosome biogenesis
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits." [GOC:dph, GOC:tb]


id: GO:0090071
name: negative regulation of ribosome biogenesis
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits." [GOC:dph, GOC:tb]


id: GO:0090072
name: obsolete positive regulation of sodium ion transport via voltage-gated sodium channel activity
namespace: biological_process
def:
  "OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of sodium ions via the activity of voltage-gated sodium channels." [GOC:dph, GOC:tb]


id: GO:0090073
name: positive regulation of protein homodimerization activity
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer." [GOC:dph, GOC:tb]


id: GO:0090074
name: negative regulation of protein homodimerization activity
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer." [GOC:dph, GOC:tb]


id: GO:0090075
name: relaxation of muscle
namespace: biological_process
def:
  "A process in which the extent of muscle contraction is reduced. Muscle relaxation can involve a number of processes including the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases. In some muscles, calcium-independent pathways also play a role in muscle relaxation by decreasing the phosphorylation state of myosin light chain." [GOC:BHF, GOC:rl, PMID:19996365]


id: GO:0090076
name: relaxation of skeletal muscle
namespace: biological_process
def:
  "A process in which the extent of skeletal muscle tissue contraction is reduced. Muscle relaxation involves the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases." [GOC:BHF, GOC:rl]


id: GO:0090077
name: foam cell differentiation
namespace: biological_process
def:
  "The process in which a relatively unspecialized cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions." [GOC:add, GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090078
name: smooth muscle derived foam cell differentiation
namespace: biological_process
def:
  "The process in which a smooth muscle cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions." [GOC:add, GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090079
name: translation regulator activity, nucleic acid binding
namespace: molecular_function
def:
  "Any selective and non-covalent interaction with a nucleic acid involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome." [GOC:dph, GOC:tb, GOC:vw]


id: GO:0090080
name: positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway
namespace: biological_process
def:
  "The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands resulting in an increase in the rate or frequency of a MAPKKK cascade." [GOC:dph, GOC:tb]


id: GO:0090081
name: regulation of heart induction by regulation of canonical Wnt signaling pathway
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of canonical Wnt signaling pathway that regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, followed by relaying of the signal via beta-catenin, and ending with a change in transcription of target genes." [GOC:mtg_heart]


id: GO:0090082
name: positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of canonical Wnt signaling pathway that positively regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes." [GOC:mtg_heart, PMID:16860783]


id: GO:0090083
name: regulation of inclusion body assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090084
name: negative regulation of inclusion body assembly
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090085
name: regulation of protein deubiquitination
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090086
name: negative regulation of protein deubiquitination
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of protein deubiquitination. Protein deubiquitination is the removal of one or more ubiquitin groups from a protein." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090087
name: regulation of peptide transport
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [GOC:dph, GOC:tb]


id: GO:0090088
name: regulation of oligopeptide transport
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages." [GOC:dph, GOC:tb]


id: GO:0090089
name: regulation of dipeptide transport
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of dipeptide transport. Dipeptide transport is the directed movement of a dipeptide, a combination of two amino acids by means of a peptide (-CO-NH-) link, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [GOC:dph, GOC:tb]


id: GO:0090090
name: negative regulation of canonical Wnt signaling pathway
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes." [GOC:dph, GOC:tb]


id: GO:0090091
name: positive regulation of extracellular matrix disassembly
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix." [GOC:dph, GOC:tb]


id: GO:0090092
name: regulation of transmembrane receptor protein serine/threonine kinase signaling pathway
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand." [GOC:dph, GOC:tb]


id: GO:0090093
name: regulation of fungal-type cell wall beta-glucan biosynthetic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of fungal-type cell wall beta-glucan biosynthesis, the chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of fungal cells." [GOC:dph, GOC:tb]


id: GO:0090094
name: metanephric cap mesenchymal cell proliferation involved in metanephros development
namespace: biological_process
def:
  "The multiplication or reproduction of metanephric cap mesenchymal cells, resulting in the expansion of the cell population. A metanephric cap mesenchymal cell is a mesenchymal cell that has condensed with other mesenchymal cells surrounding the ureteric bud tip." [GOC:dph, GOC:tb, GOC:yaf, PMID:19161241]


id: GO:0090095
name: regulation of metanephric cap mesenchymal cell proliferation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of metanephric cap mesenchymal cell proliferation. Metanephric cap mesenchymal cell proliferation is the multiplication or reproduction of metanephric cap mesenchymal cells, resulting in the expansion of the cell population. A metanephric cap mesenchymal cell is a mesenchymal cell that has condensed with other mesenchymal cells surrounding the ureteric bud tip." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090096
name: positive regulation of metanephric cap mesenchymal cell proliferation
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of metanephric cap mesenchymal cell proliferation. Metanephric cap mesenchymal cell proliferation is the multiplication or reproduction of metanephric cap mesenchymal cells, resulting in the expansion of the cell population. A metanephric cap mesenchymal cell is a mesenchymal cell that has condensed with other mesenchymal cells surrounding the ureteric bud tip." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090097
name: regulation of decapentaplegic signaling pathway
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of the decapentaplegic signaling pathway. The decapentaplegic signaling pathway is the series of molecular signals generated as a consequence of the signal decapentaplegic binding to one of its physiological receptors." [GOC:dph, GOC:tb]


id: GO:0090098
name: positive regulation of decapentaplegic signaling pathway
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of the decapentaplegic signaling pathway. The decapentaplegic signaling pathway is the series of molecular signals generated as a consequence of the signal decapentaplegic binding to one of its physiological receptors." [GOC:dph, GOC:tb]


id: GO:0090099
name: negative regulation of decapentaplegic signaling pathway
namespace: biological_process
def:
  "Any process that decreases the frequency, rate, or extent of the decapentaplegic signaling pathway. The decapentaplegic signaling pathway is the series of molecular signals generated as a consequence of the signal decapentaplegic binding to one of its physiological receptors." [GOC:dph, GOC:tb]


id: GO:0090100
name: positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand." [GOC:dph, GOC:tb]


id: GO:0090101
name: negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand." [GOC:dph, GOC:tb]


id: GO:0090102
name: cochlea development
namespace: biological_process
def:
  "The progression of the cochlea over time from its formation to the mature structure. The cochlea is the snail-shaped portion of the inner ear that is responsible for the detection of sound." [GOC:dph, GOC:tb]


id: GO:0090104
name: pancreatic epsilon cell differentiation
namespace: biological_process
def:
  "The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic epsilon cell. A pancreatic epsilon cell is a cell in the pancreas that secretes ghrelin." [GOC:dph, GOC:tb]


id: GO:0090105
name: pancreatic E cell development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of a pancreatic E cell over time, from its formation to the mature structure." [GOC:dph, GOC:tb]


id: GO:0090106
name: pancreatic E cell fate commitment
namespace: biological_process
def:
  "The commitment of a cell to a pancreatic E cell fate and its capacity to differentiate into a pancreatic E cell." [GOC:dph, GOC:tb]


id: GO:0090107
name: regulation of high-density lipoprotein particle assembly
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle." [GOC:dph, GOC:tb]


id: GO:0090108
name: positive regulation of high-density lipoprotein particle assembly
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090109
name: regulation of cell-substrate junction assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of cell-substrate junction assembly. Cell-substrate junction assembly is the aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate." [GOC:dph, GOC:tb]


id: GO:0090110
name: cargo loading into COPII-coated vesicle
namespace: biological_process
def:
  "The formation of a protein complex between the COPII coat proteins and proteins that are going to be transported by the COPII vesicle to the Golgi." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090111
name: regulation of COPII vesicle uncoating
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of COPII vesicle uncoating, the process in which COPII vesicle coat proteins are disassembled, and released." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090112
name: COPII vesicle uncoating
namespace: biological_process
def:
  "The process in which COPII vesicle coat proteins are disassembled, and released." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090113
name: regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis
namespace: biological_process
def:
  "The GTP hydrolysis process that modulates the rate, frequency, or extent of ER to Golgi vesicle-mediated transport, the directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090114
name: COPII-coated vesicle budding
namespace: biological_process
def:
  "The evagination of an endoplasmic reticulum membrane, resulting in formation of a COPII-coated vesicle." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090115
name: C-5 methylation on cytosine involved in chromatin silencing
namespace: biological_process
def:
  "The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule that contributes to chromatin silencing." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090116
name: C-5 methylation of cytosine
namespace: biological_process
def:
  "The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090117
name: endosome to lysosome transport of low-density lipoprotein particle
namespace: biological_process
def:
  "The directed movement of low-density lipoprotein particle from endosomes to lysosomes." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090118
name: receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport
namespace: biological_process
def:
  "A receptor-mediated endocytosis process that results in the uptake of low-density lipoprotein by cells." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090119
name: vesicle-mediated cholesterol transport
namespace: biological_process
def:
  "The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, by membrane-bounded vesicles." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090120
name: lysosome to ER cholesterol transport
namespace: biological_process
def:
  "The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, from the lysosome to the endoplasmic reticulum." [GOC:mah]


id: GO:0090121
name: low-density lipoprotein particle disassembly involved in cholesterol transport
namespace: biological_process
def:
  "The disassembly into constituent parts of the low-density lipoprotein particle in the lysosome that contributes to cholesterol transport." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090122
name: cholesterol ester hydrolysis involved in cholesterol transport
namespace: biological_process
def:
  "The cholesterol metabolic process in which cholesterol esters are hydrolyzed into free fatty acids and cholesterol in the lysosome that contributes to intracellular cholesterol transport." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090123
name: lysosomal glycocalyx
namespace: cellular_component
def:
  "The polysaccharide-based coating on the inner side of a lysosomal membrane that protects it from digestion by lysosomal enzymes." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090124
name: N-4 methylation of cytosine
namespace: biological_process
def:
  "The covalent transfer of a methyl group to N-4 of cytosine in a DNA molecule." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090125
name: cell-cell adhesion involved in synapse maturation
namespace: biological_process
def:
  "The attachment of the pre-synaptic cell to the post-synaptic cell via adhesion molecules that contributes to synapse maturation." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090126
name: protein complex assembly involved in synapse maturation
namespace: biological_process
def:
  "The aggregation, arrangement and bonding together of a set of components to form a protein complex that contributes to synapse maturation." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090127
name: positive regulation of synapse maturation by synaptic transmission
namespace: biological_process
def:
  "Any process that increases the extent of synaptic maturation as a result of the communication from a pre-synaptic cell to a post-synaptic cell across a synapse." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090128
name: regulation of synapse maturation
namespace: biological_process
def:
  "Any process that modulates the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090129
name: positive regulation of synapse maturation
namespace: biological_process
def:
  "Any process that increases the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090130
name: tissue migration
namespace: biological_process
def:
  "The process in which the population of cells that make up a tissue undergo directed movement." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090131
name: mesenchyme migration
namespace: biological_process
def:
  "The process in which the population of cells that make up a mesenchyme undergo directed movement." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090132
name: epithelium migration
namespace: biological_process
def:
  "The process in which the population of cells that make up an epithelium undergo directed movement." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090133
name: mesendoderm migration
namespace: biological_process
def:
  "The process in which the population of cells that make up a mesendoderm undergo directed movement. The mesendoderm is the epithelial tissue that gives rise to both mesoderm and endoderm." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090134
name: cell migration involved in mesendoderm migration
namespace: biological_process
def:
  "The orderly movement of epithelial cells from one site to another that contributes to the migration of mesendodermal tissue." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090135
name: actin filament branching
namespace: biological_process
def:
  "The formation of daughter actin filament branches at an angle on the sides of preexisting mother filaments." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090136
name: epithelial cell-cell adhesion
namespace: biological_process
def:
  "The attachment of an epithelial cell to another epithelial cell via adhesion molecules." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090137
name: epithelial cell-cell adhesion involved in epithelium migration
namespace: biological_process
def:
  "The attachment of an epithelial cell to another epithelial cell via adhesion molecules that contributes to epithelium migration." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090138
name: regulation of actin cytoskeleton organization by cell-cell adhesion
namespace: biological_process
def:
  "Any cell-cell adhesion process that modulates the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090139
name: mitochondrial DNA packaging
namespace: biological_process
def:
  "Any process in which mitochondrial DNA and associated proteins are formed into a compact, orderly structure." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090140
name: regulation of mitochondrial fission
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090141
name: positive regulation of mitochondrial fission
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090143
name: nucleoid organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleoid. The nucleoid is the region of a bacterial cell, virion, mitochondrion or chloroplast to which the DNA is confined." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090144
name: mitochondrial nucleoid organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid. The mitochondrial nucleoid is the region of a mitochondrion to which the DNA is confined." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090145
name: mitochondrial nucleoid organization involved in mitochondrial fission
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid that contributes to mitochondrial division." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090146
name: establishment of mitochondrion localization involved in mitochondrial fission
namespace: biological_process
def:
  "The directed movement of mitochondria to the correct region of the cell that contributes to the process of mitochondrial fission." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090147
name: regulation of establishment of mitochondrion localization involved in mitochondrial fission
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the directed movement of mitochondria to the correct region of the cell that contributes to the process of mitochondrial fission." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090148
name: membrane fission
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the separation of a single continuous membrane into two membranes." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090149
name: mitochondrial membrane fission
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the separation of a single continuous mitochondrial membrane into two membranes and contributes to mitochondrial fission." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090150
name: establishment of protein localization to membrane
namespace: biological_process
def:
  "The directed movement of a protein to a specific location in a membrane." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090151
name: establishment of protein localization to mitochondrial membrane
namespace: biological_process
def:
  "The directed movement of a protein to a specific location in the mitochondrial membrane." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090152
name: establishment of protein localization to mitochondrial membrane involved in mitochondrial fission
namespace: biological_process
def:
  "The directed movement of a protein to a specific location in the mitochondrial membrane that contributes to mitochondrial fission." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090153
name: regulation of sphingolipid biosynthetic process
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid)." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090154
name: positive regulation of sphingolipid biosynthetic process
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid)." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090155
name: negative regulation of sphingolipid biosynthetic process
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid)." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090156
name: cellular sphingolipid homeostasis
namespace: biological_process
def:
  "Any biological process involved in the maintenance of an internal steady state of sphingolipids at the level of the cell." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090157
name: negative regulation of sphingolipid biosynthesis involved in cellular sphingolipid homeostasis
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of sphingolipid biosynthesis that contributes to the maintenance of an internal equilibrium of sphingolipids at the level of the cell." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090158
name: endoplasmic reticulum membrane organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an endoplasmic reticulum membrane." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090159
name: sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid)." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090161
name: Golgi ribbon formation
namespace: biological_process
def:
  "The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090162
name: establishment of epithelial cell polarity
namespace: biological_process
def:
  "The specification and formation of anisotropic intracellular organization of an epithelial cell." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090163
name: establishment of epithelial cell planar polarity
namespace: biological_process
def:
  "The specification and formation of the polarity of an epithelial cell along the plane of the epithelial tissue." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090164
name: asymmetric Golgi ribbon formation
namespace: biological_process
def:
  "The asymmetric formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae that contributes to the establishment of epithelial cell polarity." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090165
name: regulation of secretion by asymmetric Golgi ribbon formation
namespace: biological_process
def:
  "The asymmetric formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae that modulates the controlled release of a substance from a polarized epithelial cell." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090166
name: Golgi disassembly
namespace: biological_process
def:
  "A cellular process that results in the breakdown of a Golgi apparatus that contributes to Golgi inheritance." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090167
name: Golgi distribution to daughter cells
namespace: biological_process
def:
  "Any process in which disassembled Golgi vesicles are localized into daughter cells upon cell division." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090168
name: Golgi reassembly
namespace: biological_process
def:
  "The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090169
name: regulation of spindle assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of spindle assembly. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090170
name: regulation of Golgi inheritance
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of Golgi inheritance. Golgi inheritance is the partitioning of Golgi apparatus between daughter cells at cell division." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090171
name: chondrocyte morphogenesis
namespace: biological_process
def:
  "The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090172
name: microtubule cytoskeleton organization involved in homologous chromosome segregation
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins that contributes to chromosomal pairing and precedes synapsis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090173
name: regulation of synaptonemal complex assembly
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of synaptonemal complex assembly. Synaptonemal complex assembly is the cell cycle process in which the synaptonemal complex, a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination, is formed." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090174
name: organelle membrane fusion
namespace: biological_process
def:
  "The joining of two lipid bilayers to form a single organelle membrane." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090175
name: regulation of establishment of planar polarity
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of the establishment of planar polarity, the coordinated organization of groups of cells in a tissue, such that they all orient to similar coordinates." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090176
name: microtubule cytoskeleton organization involved in establishment of planar polarity
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins and contributes to the establishment of planar polarity." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090177
name: establishment of planar polarity involved in neural tube closure
namespace: biological_process
def:
  "Coordinated organization of groups of cells in the plane of an epithelium that contributes to the closure of the neural tube." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090178
name: regulation of establishment of planar polarity involved in neural tube closure
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the establishment of planar polarity involved in neural tube closure, the coordinated organization of groups of cells in the plane of an epithelium that contributes to the closure of the neural tube." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090179
name: planar cell polarity pathway involved in neural tube closure
namespace: biological_process
def:
  "The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors that modulates the establishment of planar polarity contributing to neural tube closure." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090180
name: positive regulation of thiamine biosynthetic process
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine." [GOC:dph, GOC:tb]


id: GO:0090181
name: regulation of cholesterol metabolic process
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090182
name: regulation of secretion of lysosomal enzymes
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090183
name: regulation of kidney development
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090184
name: positive regulation of kidney development
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090185
name: negative regulation of kidney development
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090186
name: regulation of pancreatic juice secretion
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine." [GOC:dph, GOC:tb]


id: GO:0090187
name: positive regulation of pancreatic juice secretion
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090188
name: negative regulation of pancreatic juice secretion
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090189
name: regulation of branching involved in ureteric bud morphogenesis
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090190
name: positive regulation of branching involved in ureteric bud morphogenesis
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090191
name: negative regulation of branching involved in ureteric bud morphogenesis
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090192
name: regulation of glomerulus development
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090193
name: positive regulation of glomerulus development
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090194
name: negative regulation of glomerulus development
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090196
name: regulation of chemokine secretion
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of chemokine secretion, the regulated release of chemokines from a cell." [GOC:BHF, GOC:rl]


id: GO:0090197
name: positive regulation of chemokine secretion
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of chemokine secretion, the regulated release of chemokines from a cell." [GOC:BHF, GOC:rl]


id: GO:0090198
name: negative regulation of chemokine secretion
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of chemokine secretion, the regulated release of chemokines from a cell." [GOC:BHF, GOC:rl]


id: GO:0090199
name: regulation of release of cytochrome c from mitochondria
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation." [GOC:dph, GOC:mtg_apoptosis, GOC:tb]


id: GO:0090200
name: positive regulation of release of cytochrome c from mitochondria
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation." [GOC:BHF, GOC:dph, GOC:mtg_apoptosis, GOC:tb]


id: GO:0090201
name: negative regulation of release of cytochrome c from mitochondria
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation." [GOC:BHF, GOC:dph, GOC:mtg_apoptosis, GOC:tb]


id: GO:0090202
name: gene looping
namespace: biological_process
def:
  "The formation and maintenance of DNA loops that juxtapose sequentially separated regions of RNA polymerase II-transcribed genes." [GOC:dph, GOC:rb, GOC:tb, PMID:19923429, PMID:19933150]


id: GO:0090203
name: transcriptional activation by promoter-terminator looping
namespace: biological_process
def:
  "The formation and maintenance of DNA loops that juxtapose the promoter and terminator regions of RNA polymerase II-transcribed genes and activate transcription from an RNA polymerase II promoter." [GOC:dph, GOC:rb, GOC:tb]


id: GO:0090204
name: protein localization to nuclear pore
namespace: biological_process
def:
  "A process in which a protein is transported to, or maintained in, a nuclear pore." [GOC:dph, GOC:rb, GOC:tb]


id: GO:0090205
name: positive regulation of cholesterol metabolic process
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones." [GOC:dph, GOC:sl, GOC:tb]


id: GO:0090206
name: negative regulation of cholesterol metabolic process
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones." [GOC:dph, GOC:sl, GOC:tb]


id: GO:0090207
name: regulation of triglyceride metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol." [GOC:dph, GOC:sl, GOC:tb]


id: GO:0090208
name: positive regulation of triglyceride metabolic process
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol." [GOC:dph, GOC:sl, GOC:tb]


id: GO:0090209
name: negative regulation of triglyceride metabolic process
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol." [GOC:dph, GOC:sl, GOC:tb]


id: GO:0090210
name: regulation of establishment of blood-brain barrier
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain." [GOC:dph, GOC:tb]


id: GO:0090211
name: positive regulation of establishment of blood-brain barrier
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090212
name: negative regulation of establishment of blood-brain barrier
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain." [GOC:dph, GOC:tb]


id: GO:0090213
name: regulation of radial pattern formation
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of radial pattern formation, the regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur." [GOC:tb]


id: GO:0090214
name: spongiotrophoblast layer developmental growth
namespace: biological_process
def:
  "The increase in size or mass of the spongiotrophoblast layer of the placenta where the increase in size or mass contributes to the progression of that layer over time from its formation to its mature state." [GOC:dph, GOC:tb]


id: GO:0090215
name: regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate." [GOC:dph, GOC:tb]


id: GO:0090216
name: positive regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate." [GOC:dph, GOC:tb]


id: GO:0090218
name: positive regulation of lipid kinase activity
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid." [GOC:dph, GOC:tb]


id: GO:0090219
name: negative regulation of lipid kinase activity
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid." [GOC:dph, GOC:tb]


id: GO:0090220
name: chromosome localization to nuclear envelope involved in homologous chromosome segregation
namespace: biological_process
def:
  "The directed movement of a chromosome to the nuclear envelope that contributes to homologous chromosome segregation and precedes synapsis." [GOC:ascb_2009, GOC:dph, GOC:tb, PMID:19913287]


id: GO:0090221
name: mitotic spindle-templated microtubule nucleation
namespace: biological_process
def:
  "The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from within the mitotic spindle." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090222
name: centrosome-templated microtubule nucleation
namespace: biological_process
def:
  "The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from the centrosome." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090223
name: chromatin-templated microtubule nucleation
namespace: biological_process
def:
  "The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from chromatin." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090224
name: regulation of spindle organization
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090225
name: regulation of spindle density
namespace: biological_process
def:
  "Any process that modulates the number of microtubules in a given region of the spindle." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090226
name: regulation of microtubule nucleation by Ran protein signal transduction
namespace: biological_process
def:
  "Any series of molecular signals in which a Ran GTPase relays one or more of the signals resulting in the modulation of the rate, frequency or extent of microtubule nucleation." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090227
name: regulation of red or far-red light signaling pathway
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light." [GOC:tb]


id: GO:0090228
name: positive regulation of red or far-red light signaling pathway
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light." [GOC:tb]


id: GO:0090229
name: negative regulation of red or far-red light signaling pathway
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light." [GOC:tb]


id: GO:0090230
name: regulation of centromere complex assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of centromere complex assembly, the aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090231
name: regulation of spindle checkpoint
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090232
name: positive regulation of spindle checkpoint
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090233
name: negative regulation of spindle checkpoint
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090234
name: regulation of kinetochore assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of kinetochore assembly, the aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090235
name: regulation of metaphase plate congression
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of metaphase plate congression, the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090236
name: regulation of transcription from RNA polymerase II promoter involved in somitogenesis
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090237
name: regulation of arachidonic acid secretion
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue." [GOC:dph, GOC:tb]


id: GO:0090238
name: positive regulation of arachidonic acid secretion
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090239
name: regulation of histone H4 acetylation
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group." [GOC:dph, GOC:tb]


id: GO:0090240
name: positive regulation of histone H4 acetylation
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group." [GOC:dph, GOC:tb]


id: GO:0090241
name: negative regulation of histone H4 acetylation
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group." [GOC:dph, GOC:tb]


id: GO:0090242
name: retinoic acid receptor signaling pathway involved in somitogenesis
namespace: biological_process
def:
  "The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to somitogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090243
name: fibroblast growth factor receptor signaling pathway involved in somitogenesis
namespace: biological_process
def:
  "The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to somitogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090244
name: Wnt signaling pathway involved in somitogenesis
namespace: biological_process
def:
  "The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state that contributes to somitogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090245
name: axis elongation involved in somitogenesis
namespace: biological_process
def:
  "The developmental growth that results in the elongation of the rostral-caudal axis that contributes to somitogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090246
name: convergent extension involved in somitogenesis
namespace: biological_process
def:
  "The morphogenetic process in which a presomitic mesoderm narrows along the left-right axis and lengthens in the rostral-caudal axis contributing to somitogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090247
name: cell motility involved in somitogenic axis elongation
namespace: biological_process
def:
  "Any process involved in the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090248
name: cell migration involved in somitogenic axis elongation
namespace: biological_process
def:
  "The orderly movement of a presomitic mesoderm cell that contributes to somitogenic axis elongation." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090249
name: regulation of cell motility involved in somitogenic axis elongation
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090250
name: cell-cell adhesion involved in establishment of planar polarity
namespace: biological_process
def:
  "The attachment of one cell to another cell via adhesion molecules that contributes to the establishment of planar cell polarity." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090251
name: protein localization involved in establishment of planar polarity
namespace: biological_process
def:
  "Any process in which a protein is transported to, and/or maintained in, a specific location in a cell that contributes to the establishment of planar polarity." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090252
name: epithelium migration involved in imaginal disc-derived wing morphogenesis
namespace: biological_process
def:
  "The process in which the population of cells that make up a wing epithelium undergo directed movement and contribute to imaginal disc-derived morphogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090253
name: convergent extension involved in imaginal disc-derived wing morphogenesis
namespace: biological_process
def:
  "The morphogenetic process in which the wing epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to imaginal disc-derived wing morphogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090254
name: cell elongation involved in imaginal disc-derived wing morphogenesis
namespace: biological_process
def:
  "The process in which a cell elongates and contributes to imaginal disc-derived wing morphogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090255
name: cell proliferation involved in imaginal disc-derived wing morphogenesis
namespace: biological_process
def:
  "The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090256
name: regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of the multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis." [GOC:ascb_2009, GOC:dph, GOC:tb]


id: GO:0090257
name: regulation of muscle system process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system." [GOC:dph, GOC:tb]


id: GO:0090258
name: negative regulation of mitochondrial fission
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments." [GOC:sl, GOC:tb]


id: GO:0090259
name: regulation of retinal ganglion cell axon guidance
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues." [GOC:tb, GOC:yaf]


id: GO:0090260
name: negative regulation of retinal ganglion cell axon guidance
namespace: biological_process
def:
  "Any process that decreases the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues." [GOC:tb, GOC:yaf]


id: GO:0090261
name: positive regulation of inclusion body assembly
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body." [GOC:tb]


id: GO:0090262
name: regulation of transcription-coupled nucleotide-excision repair
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway." [GOC:tb]


id: GO:0090263
name: positive regulation of canonical Wnt signaling pathway
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes." [GOC:tb]


id: GO:0090264
name: regulation of immune complex clearance by monocytes and macrophages
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the process of immune complex clearance by monocytes or macrophages." [GOC:tb]


id: GO:0090265
name: positive regulation of immune complex clearance by monocytes and macrophages
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the process of immune complex clearance by monocytes or macrophages." [GOC:BHF]


id: GO:0090266
name: regulation of mitotic cell cycle spindle assembly checkpoint
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle." [GOC:mtg_cell_cycle]


id: GO:0090267
name: positive regulation of mitotic cell cycle spindle assembly checkpoint
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle." [GOC:mah, GOC:vw]


id: GO:0090268
name: activation of mitotic cell cycle spindle assembly checkpoint
namespace: biological_process
def:
  "Any process that starts the inactive process of a mitotic cell cycle spindle assembly checkpoint." [GOC:mah, GOC:vw]


id: GO:0090269
name: fibroblast growth factor production
namespace: biological_process
def:
  "The appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:BHF]


id: GO:0090270
name: regulation of fibroblast growth factor production
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:BHF]


id: GO:0090271
name: positive regulation of fibroblast growth factor production
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:BHF]


id: GO:0090272
name: negative regulation of fibroblast growth factor production
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:BHF]


id: GO:0090273
name: regulation of somatostatin secretion
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas." [GOC:BHF]


id: GO:0090274
name: positive regulation of somatostatin secretion
namespace: biological_process
def:
  "Any process that increases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas." [GOC:BHF]


id: GO:0090275
name: negative regulation of somatostatin secretion
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas." [GOC:BHF]


id: GO:0090276
name: regulation of peptide hormone secretion
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules." [GOC:tb]


id: GO:0090277
name: positive regulation of peptide hormone secretion
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules." [GOC:tb]


id: GO:0090278
name: negative regulation of peptide hormone secretion
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules." [GOC:tb]


id: GO:0090279
name: regulation of calcium ion import
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle." [GOC:BHF]


id: GO:0090280
name: positive regulation of calcium ion import
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle." [GOC:BHF]


id: GO:0090281
name: negative regulation of calcium ion import
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle." [GOC:BHF]


id: GO:0090282
name: positive regulation of transcription involved in G2/M transition of mitotic cell cycle
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle." [GOC:rn, PMID:10747051, PMID:10894548, PMID:10899128, PMID:10959837]


id: GO:0090283
name: regulation of protein glycosylation in Golgi
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus." [GOC:pr, GOC:tb]


id: GO:0090284
name: positive regulation of protein glycosylation in Golgi
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus." [GOC:pr, GOC:tb]


id: GO:0090285
name: negative regulation of protein glycosylation in Golgi
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus." [GOC:pr, GOC:tb]


id: GO:0090286
name: cytoskeletal anchoring at nuclear membrane
namespace: biological_process
def:
  "The process in which cytoskeletal filaments are directly or indirectly linked to the nuclear membrane." [GOC:tb]


id: GO:0090287
name: regulation of cellular response to growth factor stimulus
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus." [GOC:tb]


id: GO:0090288
name: negative regulation of cellular response to growth factor stimulus
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus." [GOC:BHF]


id: GO:0090289
name: regulation of osteoclast proliferation
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population." [GOC:tb]


id: GO:0090290
name: positive regulation of osteoclast proliferation
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population." [GOC:tb]


id: GO:0090291
name: negative regulation of osteoclast proliferation
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population." [GOC:tb]


id: GO:0090292
name: nuclear matrix anchoring at nuclear membrane
namespace: biological_process
def:
  "The process in which the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane, is directly or indirectly linked to the nuclear membrane." [GOC:tb]


id: GO:0090293
name: nitrogen catabolite regulation of transcription
namespace: biological_process
def:
  "A transcription regulation process in which the presence of one nitrogen source leads to the modulation of the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources." [GOC:mah, GOC:rb, PMID:19104072]


id: GO:0090294
name: nitrogen catabolite activation of transcription
namespace: biological_process
def:
  "A transcription regulation process in which the presence of one nitrogen source leads to an increase in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources." [GOC:mah, GOC:rb, PMID:19104072]


id: GO:0090295
name: nitrogen catabolite repression of transcription
namespace: biological_process
def:
  "A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources." [GOC:mah, GOC:rb, PMID:19104072]


id: GO:0090296
name: regulation of mitochondrial DNA replication
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion." [GOC:tb]


id: GO:0090297
name: positive regulation of mitochondrial DNA replication
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion." [GOC:tb]


id: GO:0090298
name: negative regulation of mitochondrial DNA replication
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion." [GOC:tb]


id: GO:0090299
name: regulation of neural crest formation
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds." [GOC:tb]


id: GO:0090300
name: positive regulation of neural crest formation
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes." [GOC:tb]


id: GO:0090301
name: negative regulation of neural crest formation
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes." [GOC:tb]


id: GO:0090302
name: APC-Cdc20 complex activity
namespace: molecular_function
def:
  "A ubiquitin-protein ligase activity that increases the rate or extent of the metaphase to anaphase transition of the mitotic cell cycle." [GOC:dph, GOC:mah, GOC:tb]


id: GO:0090303
name: positive regulation of wound healing
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury." [GOC:BHF]


id: GO:0090305
name: nucleic acid phosphodiester bond hydrolysis
namespace: biological_process
def:
  "The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis." [GOC:dph, GOC:tb]


id: GO:0090306
name: spindle assembly involved in meiosis
namespace: biological_process
def:
  "The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of meiosis." [GOC:tb, GOC:vw]


id: GO:0090307
name: mitotic spindle assembly
namespace: biological_process
def:
  "The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of mitosis." [GOC:tb, GOC:vw]


id: GO:0090308
name: regulation of methylation-dependent chromatin silencing
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin." [GOC:BHF]


id: GO:0090309
name: positive regulation of methylation-dependent chromatin silencing
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin." [GOC:BHF]


id: GO:0090310
name: negative regulation of methylation-dependent chromatin silencing
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin." [GOC:BHF]


id: GO:0090311
name: regulation of protein deacetylation
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid." [GOC:tb]


id: GO:0090312
name: positive regulation of protein deacetylation
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid." [GOC:ecd, PMID:20027304]


id: GO:0090313
name: regulation of protein targeting to membrane
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein." [GOC:tb]


id: GO:0090314
name: positive regulation of protein targeting to membrane
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein." [GOC:tb]


id: GO:0090315
name: negative regulation of protein targeting to membrane
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein." [GOC:tb]


id: GO:0090316
name: positive regulation of intracellular protein transport
namespace: biological_process
def:
  "Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells." [GOC:tb]


id: GO:0090317
name: negative regulation of intracellular protein transport
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the directed movement of proteins within cells." [GOC:tb]


id: GO:0090318
name: regulation of chylomicron remodeling
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of chylomicron remodeling. Chylomicron remodeling is the acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid." [GOC:tb]


id: GO:0090319
name: positive regulation of chylomicron remodeling
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of chylomicron remodeling. Chylomicron remodeling is the acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid." [GOC:BHF]


id: GO:0090320
name: regulation of chylomicron remnant clearance
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded." [GOC:tb]


id: GO:0090321
name: positive regulation of chylomicron remnant clearance
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded." [GOC:BHF]


id: GO:0090322
name: regulation of superoxide metabolic process
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of superoxide metabolism, the chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species." [GOC:tb]


id: GO:0090323
name: prostaglandin secretion involved in immune response
namespace: biological_process
def:
  "The regulated release of a prostaglandin that contributes to the immune response. Prostaglandins are a group of biologically active metabolites which contain a cyclopentane ring." [GOC:dph, GOC:tb]


id: GO:0090324
name: negative regulation of oxidative phosphorylation
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis." [GOC:BHF]


id: GO:0090325
name: regulation of locomotion involved in locomotory behavior
namespace: biological_process
def:
  "Any process that modulates the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement." [GOC:dph, GOC:kmv, GOC:tb]


id: GO:0090326
name: positive regulation of locomotion involved in locomotory behavior
namespace: biological_process
def:
  "Any process that increases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement." [GOC:dph, GOC:kmv, GOC:tb]


id: GO:0090327
name: negative regulation of locomotion involved in locomotory behavior
namespace: biological_process
def:
  "Any process that decreases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement." [GOC:dph, GOC:kmv, GOC:tb]


id: GO:0090328
name: regulation of olfactory learning
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue." [GOC:dph, GOC:tb]


id: GO:0090329
name: regulation of DNA-dependent DNA replication
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of DNA-dependent DNA replication, the process in which new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands." [GOC:dph, GOC:tb]


id: GO:0090330
name: regulation of platelet aggregation
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules." [GOC:dph, GOC:tb]


id: GO:0090331
name: negative regulation of platelet aggregation
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules." [GOC:BHF]


id: GO:0090332
name: stomatal closure
namespace: biological_process
def:
  "The process of closing of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange." [GOC:tb]


id: GO:0090333
name: regulation of stomatal closure
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of stomatal closure. Stomatal closure is the process of closing of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange." [GOC:tb]


id: GO:0090334
name: regulation of cell wall (1->3)-beta-D-glucan biosynthetic process
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells." [GOC:tb]


id: GO:0090335
name: regulation of brown fat cell differentiation
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria." [GOC:tb]


id: GO:0090336
name: positive regulation of brown fat cell differentiation
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria." [GOC:BHF]


id: GO:0090337
name: regulation of formin-nucleated actin cable assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins." [GOC:jh, GOC:tb, PMID:12810699, PMID:15923184]


id: GO:0090338
name: positive regulation of formin-nucleated actin cable assembly
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins." [GOC:jh, GOC:tb, PMID:12810699, PMID:15923184]


id: GO:0090339
name: negative regulation of formin-nucleated actin cable assembly
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins." [GOC:jh, GOC:tb, PMID:12810699, PMID:15923184]


id: GO:0090340
name: positive regulation of secretion of lysosomal enzymes
namespace: biological_process
def:
  "Any process that increases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell." [GOC:BHF]


id: GO:0090341
name: negative regulation of secretion of lysosomal enzymes
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell." [GOC:BHF]


id: GO:0090342
name: regulation of cell aging
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090343
name: positive regulation of cell aging
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090344
name: negative regulation of cell aging
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan." [GOC:BHF, GOC:dph, GOC:tb]


id: GO:0090345
name: cellular organohalogen metabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells." [GOC:BHF]


id: GO:0090346
name: cellular organofluorine metabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells." [GOC:BHF]


id: GO:0090347
name: regulation of cellular organohalogen metabolic process
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells." [GOC:BHF]


id: GO:0090348
name: regulation of cellular organofluorine metabolic process
namespace: biological_process
def:
  "Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells." [GOC:BHF]


id: GO:0090349
name: negative regulation of cellular organohalogen metabolic process
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells." [GOC:BHF]


id: GO:0090350
name: negative regulation of cellular organofluorine metabolic process
namespace: biological_process
def:
  "Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells." [GOC:BHF]


id: GO:0090351
name: seedling development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the seedling over time, beginning with seed germination and ending when the first adult leaves emerge." [GOC:tb, PO:0007131]


id: GO:0090352
name: regulation of nitrate assimilation
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the uptake, from the environment, of nitrates, inorganic or organic salts and esters of nitric acid and the subsequent reduction of nitrate ion to other, less highly oxidized, inorganic nitrogenous substances." [GOC:tb]


id: GO:0090353
name: polygalacturonase inhibitor activity
namespace: molecular_function
def:
  "Stops, prevents or reduces the activity of a polygalacturonase. Polygalacturonases catalyze the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans." [GOC:tb]


id: GO:0090354
name: regulation of auxin metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth." [GOC:tb]


id: GO:0090355
name: positive regulation of auxin metabolic process
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth." [GOC:tb]


id: GO:0090356
name: negative regulation of auxin metabolic process
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth." [GOC:tb]


id: GO:0090357
name: regulation of tryptophan metabolic process
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid." [GOC:tb]


id: GO:0090358
name: positive regulation of tryptophan metabolic process
namespace: biological_process
def:
  "Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid." [GOC:tb]


id: GO:0090359
name: negative regulation of abscisic acid biosynthetic process
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid." [GOC:tb]


id: GO:0090360
name: platelet-derived growth factor production
namespace: biological_process
def:
  "The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:BHF]


id: GO:0090361
name: regulation of platelet-derived growth factor production
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:BHF]


id: GO:0090362
name: positive regulation of platelet-derived growth factor production
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:BHF]


id: GO:0090363
name: regulation of proteasome core complex assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of a mature, active 20S proteasome core particle complex that does not contain any regulatory particles." [GOC:dph, GOC:elh, GOC:tb]


id: GO:0090364
name: regulation of proteasome assembly
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of a mature, active proteasome complex." [GOC:dph, GOC:elh, GOC:tb]


id: GO:0090365
name: regulation of mRNA modification
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically." [GOC:dph, GOC:sl, GOC:tb, PMID:14559896]


id: GO:0090366
name: positive regulation of mRNA modification
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically." [GOC:dph, GOC:sl, GOC:tb]


id: GO:0090367
name: negative regulation of mRNA modification
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically." [GOC:dph, GOC:sl, GOC:tb]


id: GO:0090368
name: regulation of ornithine metabolic process
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis." [GOC:dph, GOC:jp, GOC:tb]


id: GO:0090369
name: ornithine carbamoyltransferase inhibitor activity
namespace: molecular_function
def:
  "Stops, prevents, or reduces ornithine carbamoyltransferase activity, the catalysis of the reaction: carbamoyl phosphate + L-ornithine = phosphate + L-citrulline." [GOC:dph, GOC:jp, GOC:tb]


id: GO:0090370
name: negative regulation of cholesterol efflux
namespace: biological_process
def:
  "Any process that decreases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle." [GOC:dph, GOC:tb, GOC:yaf]


id: GO:0090371
name: regulation of glycerol transport
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [GOC:dph, GOC:jh, GOC:tb]


id: GO:0090372
name: positive regulation of glycerol transport
namespace: biological_process
def:
  "Any process that increases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [GOC:dph, GOC:jh, GOC:tb]


id: GO:0090373
name: negative regulation of glycerol transport
namespace: biological_process
def:
  "Any process that decreases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." [GOC:dph, GOC:jh, GOC:tb]


id: GO:0090374
name: oligopeptide export from mitochondrion
namespace: biological_process
def:
  "The directed movement of oligopeptides out of mitochondria into the cytosol by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages." [PMID:11251115]


id: GO:0090375
namespace: biological_process
name:
  negative regulation of transcription from RNA polymerase II promoter in response to iron ion starvation

def:
  "Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of iron ions." [GOC:tb]


id: GO:0090376
name: seed trichome differentiation
namespace: biological_process
def:
  "The process in which a relatively unspecialized epidermal cell acquires the specialized features of a seed trichome. A seed trichome is a trichome that develops from seed coat epidermis and is often long with putative dispersal function." [GOC:tb, PMID:17905721]


id: GO:0090377
name: seed trichome initiation
namespace: biological_process
def:
  "The process in which the developmental fate of an epidermal cell becomes restricted such that it will develop into a seed trichome, causing a change in the orientation of cell division in the ovule epidermis at or just before anthesis." [PMID:17905721]


id: GO:0090378
name: seed trichome elongation
namespace: biological_process
def:
  "The process in which a seed trichome irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell." [GOC:tb]


id: GO:0090379
name: secondary cell wall biogenesis involved in seed trichome differentiation
namespace: biological_process
def:
  "A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall of seed trichomes after cell expansion is complete." [GOC:tb]


id: GO:0090380
name: seed trichome maturation
namespace: biological_process
def:
  "A developmental process, independent of morphogenetic (shape) change, that is required for a seed trichome to attain its fully functional state." [GOC:tb]


id: GO:0090381
name: regulation of heart induction
namespace: biological_process
def:
  "Any process that modulates the rate, frequency, or extent of heart induction. Heart induction is the close range interaction between mesoderm and endoderm or ectoderm that causes cells to change their fates and specify the development of the heart." [GOC:dph, GOC:tb]


id: GO:0090382
name: phagosome maturation
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome." [GOC:kmv, GOC:tb]


id: GO:0090383
name: phagosome acidification
namespace: biological_process
def:
  "Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion." [GOC:kmv, GOC:tb]


id: GO:0090384
name: phagosome-lysosome docking
namespace: biological_process
def:
  "The initial attachment of a phagosome membrane to a lysosome membrane. Docking requires only that the proteins come close enough to interact and adhere." [GOC:kmv, GOC:tb]


id: GO:0090386
name: phagosome maturation involved in apoptotic cell clearance
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome." [GOC:kmv, GOC:tb]


id: GO:0090387
name: phagolysosome assembly involved in apoptotic cell clearance
namespace: biological_process
def:
  "The process in which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome as a part of apoptotic cell clearance." [GOC:kmv, GOC:tb]


id: GO:0090388
name: phagosome-lysosome docking involved in apoptotic cell clearance
namespace: biological_process
def:
  "The initial attachment of a phagosome membrane to a lysosome membrane that occurs as a part of apoptotic cell clearance. Docking requires only that the proteins come close enough to interact and adhere." [GOC:kmv, GOC:tb]


id: GO:0090389
name: phagosome-lysosome fusion involved in apoptotic cell clearance
namespace: biological_process
def:
  "The creation of a phagolysosome from a phagosome and a lysosome as a part of apoptotic cell clearance." [GOC:kmv, GOC:tb]


id: GO:0090390
name: phagosome acidification involved in apoptotic cell clearance
namespace: biological_process
def:
  "Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion, and occurs as a part of apoptotic cell clearance." [GOC:kmv, GOC:tb]


id: GO:0090391
name: granum assembly
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly of a granum. A granum is a distinct stack of lamellae seen within chloroplasts." [GOC:tb]


id: GO:0090392
name: sepal giant cell differentiation
namespace: biological_process
def:
  "The process in which a relatively unspecialized cell acquires specialized features of a sepal giant cell. A sepal giant cell is a pavement cell that is part of the sepal epidermis and stretches one fifth the length of the sepal with a chromosome content of 16C." [GOC:tb, PMID:20485493]


id: GO:0090393
name: sepal giant cell development
namespace: biological_process
def:
  "The process aimed at the progression of a sepal giant cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell." [GOC:tb]


id: GO:0090394
name: negative regulation of excitatory postsynaptic potential
namespace: biological_process
def:
  "Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential." [GOC:BHF]


id: GO:0090398
name: cellular senescence
namespace: biological_process
def:
  "A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest." [GOC:BHF]


id: GO:0090399
name: replicative senescence
namespace: biological_process
def:
  "A cell aging process associated with the dismantling of a cell as a response to telomere shortening and/or cellular aging." [GOC:BHF]


id: GO:0090400
name: stress-induced premature senescence
namespace: biological_process
def:
  "A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays." [GOC:BHF]


id: GO:0090401
name: viral-induced premature senescence
namespace: biological_process
def:
  "A cellular senescence process associated with the dismantling of a cell as a response to viral infection." [GOC:BHF]


id: GO:0090402
name: oncogene-induced cell senescence
namespace: biological_process
def:
  "A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family." [GOC:BHF]


id: GO:0090403
name: oxidative stress-induced premature senescence
namespace: biological_process
def:
  "A cellular senescence process associated with the dismantling of a cell as a response to oxidative stress, e.g. high levels of reactive oxygen species, such as superoxide anions, hydrogen peroxide, and hydroxyl radicals." [GOC:BHF]


id: GO:0090404
name: pollen tube tip
namespace: cellular_component
def:
  "The region at growing end of the pollen tube cell, where polarized growth occurs." [GOC:tb, PO:0025195, PO:0025281]


id: GO:0090406
name: pollen tube
namespace: cellular_component
def:
  "A tubular cell projection that is part of a pollen tube cell and extends from a pollen grain." [GOC:tb, PO:0025195, PO:0025281]


id: GO:0090407
name: organophosphate biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the biosynthesis of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose." [GOC:chem_mtg]


id: GO:0090408
name: phloem nitrate loading
namespace: biological_process
def:
  "The process of loading nitrate into the sieve tube or companion cell of the phloem for long distance transport from source to sink." [GOC:tb]


id: GO:0090409
name: malonyl-CoA synthetase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: malonate + ATP + coenzyme A = malonyl-CoA + AMP + diphosphate." [MetaCyc:RXN-12359]


id: GO:0090410
name: malonate catabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the breakdown of malonate, the propanedioate ion." [GOC:tb]


id: GO:0090412
namespace: biological_process
name:
  obsolete positive regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process

def:
  "Any positive regulation of transcription from RNA polymerase II promoter that is involved in fatty acid biosynthetic process." [GOC:vw]


id: GO:0090413
namespace: biological_process
name:
  obsolete negative regulation of transcription from RNA polymerase II promoter involved in fatty acid biosynthetic process

def:
  "Any negative regulation of transcription from RNA polymerase II promoter that is involved in fatty acid biosynthetic process." [GOC:vw]


id: GO:0090415
name: 7-hydroxymethyl chlorophyll a reductase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O." [GOC:kad, PMID:21934147]


id: GO:0090416
name: nicotinate transporter activity
namespace: molecular_function
def:
  "Enables the directed movement of nicotinate into, out of or within a cell, or between cells." [GOC:tb]


id: GO:0090417
name: N-methylnicotinate transporter activity
namespace: molecular_function
def:
  "Enables the directed movement of N-methylnicotinate into, out of or within a cell, or between cells." [GOC:tb]


id: GO:0090418
name: obsolete positive regulation of transcription involved in S-phase of mitotic cell cycle
namespace: biological_process
def:
  "OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the S phase of the mitotic cell cycle." [PMID:16912276]


id: GO:0090419
name: negative regulation of transcription involved in G2/M transition of mitotic cell cycle
namespace: biological_process
def:
  "Any process that inhibits or decreases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle." [GOC:mtg_cell_cycle, PMID:10747051]


id: GO:0090421
name: embryonic meristem initiation
namespace: biological_process
def:
  "Initiation of a region of tissue in a plant embryo that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation." [GOC:tb]


id: GO:0090422
name: thiamine pyrophosphate transporter activity
namespace: molecular_function
def:
  "Enables the directed movement of thiamine pyrophosphate into, out of or within a cell, or between cells." [GOC:tb]


id: GO:0090423
name: phytochelatin-metal complex formation
namespace: biological_process
def:
  "A phytochelatin metabolic process in which a metal is incorporated with phytochelatin to form a complex." [GOC:tb]


id: GO:0090424
name: phytochelatin-metal-sulfur complex formation
namespace: biological_process
def:
  "A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex." [GOC:tb]


id: GO:0090425
name: acinar cell differentiation
namespace: biological_process
def:
  "The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini." [GOC:dph, GOC:tb]


id: GO:0090426
name: actin filament bundle convergence
namespace: biological_process
def:
  "A process of actin filament bundle distribution that results in the compaction of actin filaments." [GOC:dph, GOC:tb]


id: GO:0090428
name: perianth development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the perianth over time, from its formation to the mature structure. The perianth is a collective phyllome structure composed of two or more petals, sepals, or tepals." [GOC:tb, PO:0009058]


id: GO:0090429
name: detection of endogenous biotic stimulus
namespace: biological_process
def:
  "The series of events in which an endogenous biotic stimulus is received by a cell and converted into a molecular signal." [GOC:dph, GOC:tb]


id: GO:0090430
name: caffeoyl-CoA: alcohol caffeoyl transferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: caffeoyl-CoA + a saturated primary alcohol = an alkyl caffeate + CoA." [GOC:pz]


id: GO:0090431
name: alkyl caffeate ester biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of ester derivatives of alkyl caffeate." [GOC:pz]


id: GO:0090432
name: myristoyl-CoA ligase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: ATP + myristic acid + CoA = AMP + diphosphate + myristoyl-CoA." [GOC:al, PMID:18071249]


id: GO:0090433
name: palmitoyl-CoA ligase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: ATP + palmitic acid + CoA = AMP + diphosphate + palmitoyl-CoA." [GOC:al, PMID:18071249]


id: GO:0090434
name: oleoyl-CoA ligase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: ATP + oleic acid + CoA = AMP + diphosphate + oleoyl-CoA." [GOC:al, PMID:18071249]


id: GO:0090435
name: protein localization to nuclear envelope
namespace: biological_process
def:
  "A process in which a protein is transported to, or maintained at, a location within a nuclear envelope." [GOC:tb]


id: GO:0090436
name: leaf pavement cell development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate." [GOC:tb]


id: GO:0090437
name: socket cell differentiation
namespace: biological_process
def:
  "The process in which a relatively unspecialized cell acquires specialized features of a socket cell, a shoot epidermal cell that surrounds a trichome and provides its support." [GOC:tb]


id: GO:0090439
name: tetraketide alpha-pyrone synthase activity
namespace: molecular_function
def:
  "Catalyzes the reaction: a hydroxyacyl-CoA + 3 malonyl-CoA + 2 H+ = a hydroxylated tetraketide alpha-pyrone + 3 CO2 + 4 coenzyme A ." [MetaCyc:RXN-12183, PMID:21193570]


id: GO:0090440
name: abscisic acid transporter activity
namespace: molecular_function
def:
  "Enables the directed movement of abscisic acid into, out of or within a cell, or between cells." [GOC:tb]


id: GO:0090441
name: trehalose biosynthesis in response to heat stress
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism." [GOC:dph, GOC:tb]


id: GO:0090442
name: trehalose catabolism in response to heat stress
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism." [GOC:dph, GOC:tb]


id: GO:0090443
name: FAR/SIN/STRIPAK complex
namespace: cellular_component
def:
  "A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body." [GOC:vw, PMID:21561862, PMID:22119525]


id: GO:0090444
name: regulation of nematode larval development, heterochronic
namespace: biological_process
def:
  "Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and the rate at which this time point is reached." [PMID:17550772]


id: GO:0090445
name: positive regulation of nematode larval development, heterochronic
namespace: biological_process
def:
  "Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and increases the rate at which this time point is reached." [PMID:17550772]


id: GO:0090446
name: negative regulation of nematode larval development, heterochronic
namespace: biological_process
def:
  "Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and decreases the rate at which this time point is reached." [PMID:17550772]


id: GO:0090447
name: glycerol-3-phosphate 2-O-acyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: an acyl-CoA + sn-glycerol 3-phosphate = CoA + a 2-acyl-sn-glycerol 3-phosphate." [EC:2.3.1.198]


id: GO:0090448
name: glucosinolate:proton symporter activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucosinolate(out) + H+(out) = glucosinolate(in) + H+(in)." [PMID:22864417]


id: GO:0090449
name: phloem glucosinolate loading
namespace: biological_process
def:
  "The process of loading glucosinolates into the sieve tube or companion cell of the phloem for long distance transport from source to sink." [PMID:22864417]


id: GO:0090451
name: cotyledon boundary formation
namespace: biological_process
def:
  "The process in which boundaries between a cotyledon and the surrounding tissue are established and maintained." [GOC:tb]


id: GO:0090459
name: aspartate homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of aspartate within an organism or cell." [GOC:tb]


id: GO:0090460
name: threonine homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of threonine within an organism or cell." [GOC:tb]


id: GO:0090461
name: glutamate homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of glutamate within an organism or cell." [GOC:tb]


id: GO:0090462
name: ornithine homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of ornithine within an organism or cell." [GOC:tb]


id: GO:0090463
name: lysine homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of lysine within an organism or cell." [GOC:tb]


id: GO:0090464
name: histidine homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of histidine within an organism or cell." [GOC:tb]


id: GO:0090465
name: arginine homeostasis
namespace: biological_process
def:
  "Any process involved in the maintenance of an internal steady state of arginine within an organism or cell." [GOC:tb]


id: GO:0090470
name: shoot organ boundary specification
namespace: biological_process
def:
  "The process in which the basal boundary between the stem and both vegetative and reproductive organs are established and maintained." [PMID:18757555]


id: GO:0090472
name: dibasic protein processing
namespace: biological_process
def:
  "Any protein processing achieved by the cleavage of a peptide bond after two basic amino acids within a protein." [GOC:al]


id: GO:0090473
name: lys-arg specific dibasic protein processing
namespace: biological_process
def:
  "Any protein processing achieved by the cleavage of a peptide bond after a lysine-arginine amino acid residue combination within a protein." [GOC:al]


id: GO:0090474
name: arg-arg specific dibasic protein processing
namespace: biological_process
def:
  "Any protein processing achieved by the cleavage of a peptide bond after two consecutive arginine amino acid residues within a protein." [GOC:al]


id: GO:0090475
name: lys-lys specific dibasic protein processing
namespace: biological_process
def:
  "Any protein processing achieved by the cleavage of a peptide bond after two consecutive lysine amino acid residues within a protein." [GOC:al]


id: GO:0090477
name: L-isoleucine import
namespace: biological_process
def:
  "The directed movement of L-isoleucine, the L-enantiomer of isoleucine, into a cell or organelle." [GOC:mah]


id: GO:0090479
name: L-serine import
namespace: biological_process
def:
  "The directed movement of L-serine, the L-enantiomer of serine, into a cell or organelle." [GOC:mah]


id: GO:0090480
name: purine nucleotide-sugar transmembrane transport
namespace: biological_process
def:
  "The directed movement of a purine nucleotide-sugar across a membrane. Purine nucleotide-sugars are purine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative." [GOC:tb]


id: GO:0090481
name: pyrimidine nucleotide-sugar transmembrane transport
namespace: biological_process
def:
  "The directed movement of pyrimidine nucleotide-sugars across a membrane. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative." [GOC:tb]


id: GO:0090483
name: phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: phosphatidylglycerol + phosphatidylethanolamine = cardiolipin + ethanolamine." [PMID:22988102]


id: GO:0090484
name: drug transporter activity
namespace: molecular_function
def:
  "Enables the directed movement of a drug into, out of or within a cell, or between cells. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease." [GOC:tb]


id: GO:0090486
name: small RNA 2'-O-methyltransferase
namespace: molecular_function
def:
  "Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a nucleoside residue in a small RNA molecule. Reaction: S-adenosyl-L-methionine + small RNA <=> S-adenosyl-L-homocysteine + small RNA containing a 3'-terminal 2'-O-methylnucleotide." [EC:2.1.1.n8, GOC:tb, GOC:vw]


id: GO:0090487
name: secondary metabolite catabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon." [GOC:tb]


id: GO:0090488
name: polo box domain specific binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with a polo box domain of a protein. The polo box domain is involved in binding substrates of polo kinases." [GOC:al, GOC:tb, Pfam:PF00659, PMID:12352953]


id: GO:0090489
name: L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating, decarboxylating)
namespace: molecular_function
def:
  "Catalyzes the multi-step reaction: L-Tryptophan + 2 Oxygen + 2 NADPH + 2 H+ = Indole-3-acetaldehyde oxime + 3 H2O + 2 NADP+ + CO2. The individual reactions are: (1a) L-tryptophan + O2 + NADPH + H+ = N-hydroxy-L-tryptophan + NADP+ + H2O,(1b) N-hydroxy-L-tryptophan + O2 + NADPH + H+ = N,N-dihydroxy-L-tryptophan + NADP+ + H2O, and (1c) N,N-dihydroxy-L-tryptophan = (E)-indol-3-ylacetaldoxime + CO2 + H2O." [EC:1.14.13.125, KEGG:R08160]


id: GO:0090490
name: L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating)
namespace: molecular_function
def:
  "Catalyzes the reaction: L-Tryptophan + Oxygen + NADPH + H+ = N-Hydroxy-L-tryptophan + NADP+ + H2O." [KEGG:R09583]


id: GO:0090491
name: N-hydroxy-L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating)
namespace: molecular_function
def:
  "Catalyzes the reaction: N-Hydroxy-L-tryptophan + Oxygen + NADPH + H+ = N,N-Dihydroxy-L-tryptophan + NADP+ + H2O." [KEGG:R09584]


id: GO:0090492
name: N,N-Dihydroxy-L-tryptophan decarboxylase activity
namespace: molecular_function
def:
  "Catalyzes the reaction: N,N-Dihydroxy-L-tryptophan = Indole-3-acetaldehyde oxime + CO2 + H2O." [KEGG:R09585]


id: GO:0090495
name: low-density lipoprotein particle disassembly
namespace: biological_process
def:
  "The disaggregation of a low-density lipoprotein particle into its constituent components." [GOC:dph, GOC:tb]


id: GO:0090496
name: mesenchyme migration involved in limb bud formation
namespace: biological_process
def:
  "The migration of mesenchymal tissue that contributes to the formation of a limb bud." [GOC:dph, GOC:tb]


id: GO:0090497
name: mesenchymal cell migration
namespace: biological_process
def:
  "The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism." [GOC:dph, GOC:tb]


id: GO:0090498
name: extrinsic component of Golgi membrane
namespace: cellular_component
def:
  "The component of a Golgi membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region." [GOC:dos, PMID:21337012]


id: GO:0090499
name: pimelyl-[acyl-carrier protein] methyl ester esterase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: pimelyl-[acyl-carrier protein] methyl ester + H2O = pimelyl-[acyl-carrier protein] + methanol." [EC:3.1.1.85, PMID:23045647]


id: GO:0090500
name: endocardial cushion to mesenchymal transition
namespace: biological_process
def:
  "A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell." [GOC:dph, GOC:tb]


id: GO:0090501
name: RNA phosphodiester bond hydrolysis
namespace: biological_process
def:
  "The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis." [GOC:dph, GOC:tb]


id: GO:0090502
name: RNA phosphodiester bond hydrolysis, endonucleolytic
namespace: biological_process
def:
  "The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides." [GOC:dph, GOC:tb]


id: GO:0090503
name: RNA phosphodiester bond hydrolysis, exonucleolytic
namespace: biological_process
def:
  "The chemical reactions and pathways involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides." [GOC:dph, GOC:tb]


id: GO:0090506
name: axillary shoot meristem initiation
namespace: biological_process
def:
  "A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf." [GOC:tb]


id: GO:0090507
name: phenylethylamine metabolic process involved in synaptic transmission
namespace: biological_process
def:
  "The chemical reactions and pathways involving phenylethylamine that contribute to synaptic transmission." [GOC:tb]


id: GO:0090508
name: phenylethylamine biosynthetic process involved in synaptic transmission
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of phenylethylamine that contribute to synaptic transmission." [GOC:tb]


id: GO:0090509
name: nickel cation import into cell
namespace: biological_process
def:
  "The directed movement of nickel cations from outside of a cell into the intracellular region of a cell.." [GOC:mah]


id: GO:0090510
name: anticlinal cell division
namespace: biological_process
def:
  "A cell division process where the division plane is perpendicular to the surface of the organ. It adds cells to the existing cell layer or cell file." [GOC:tair_curators, PMID:21391814]


id: GO:0090511
name: periclinal cell division
namespace: biological_process
def:
  "A cell division process where the division plane is parallel to the surface of the organ. It creates a new cell layer or cell file." [GOC:tair_curators, PMID:21391814]


id: GO:0090512
name: eisosome membrane domain/MCC
namespace: cellular_component
def:
  "A plasma membrane part that is composed of a furrow-like plasma membrane domain and associated integral transmembrane proteins." [GOC:al, GOC:vw, PMID:22368779]


id: GO:0090519
name: anoxia protection
namespace: biological_process
def:
  "Any process in which an organism or cell protects itself from anoxia, which may also result in resistance to repeated exposure to anoxia." [GOC:tb, PMID:19372430]


id: GO:0090521
name: glomerular visceral epithelial cell migration
namespace: biological_process
def:
  "The orderly movement of a podocyte from one site to another, often during the development of a multicellular organism or multicellular structure. A podocyte is a specialized kidney epithelial cell." [GOC:pm, PMID:21402783]


id: GO:0090522
name: vesicle tethering involved in exocytosis
namespace: biological_process
def:
  "The initial long-distance interaction between secretory vesicles and exocytotic sites on target membranes resulting in the capture and stabilization of vesicles prior to SNARE-mediated docking and fusion." [GOC:rn, PMID:10559876, PMID:17052174, PMID:17488620, PMID:22420621]


id: GO:0090523
name: cytochrome-b5 reductase activity, acting on NADPH
namespace: molecular_function
def:
  "Catalysis of the reaction: NADPH + H+ + 2 ferricytochrome b(5) = NADP+ + 2 ferrocytochrome b(5)." [GOC:tb]


id: GO:0090524
name: cytochrome-b5 reductase activity, acting on NADH
namespace: molecular_function
def:
  "Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5)." [GOC:tb]


id: GO:0090525
name: regulation of glycolysis involved in cellular glucose homeostasis
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of glycolysis as an integral part of cellular glucose homeostasis." [GOC:tb]


id: GO:0090526
name: regulation of gluconeogenesis involved in cellular glucose homeostasis
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of gluconeogenesis as an integral part of cellular glucose homeostasis." [GOC:tb]


id: GO:0090527
name: actin filament reorganization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of actin filaments." [GOC:dph, GOC:tb]


id: GO:0090528
name: smooth septate junction assembly
namespace: biological_process
def:
  "The assembly of a smooth septate junction, a septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions." [PMID:22854041]


id: GO:0090529
name: cell septum assembly
namespace: biological_process
def:
  "The assembly and arrangement of a cellular component that is composed of peptidoglycan and often chitin in addition to other materials and usually forms perpendicular to the long axis of a cell or hypha. It grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells." [GOC:mtg_cell_cycle]


id: GO:0090531
name: L-ascorbic acid biosynthetic process via GDP-alpha-D-mannose
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate GDP-alpha-D-mannose." [BioCyc:PWY-882, GOC:yaf, PMID:11153268, UniPathway:UPA00990]


id: GO:0090532
name: L-ascorbic acid biosynthetic process via UDP-alpha-D-glucuronate
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate UDP-alpha-D-glucuronate." [BioCyc:PWY3DJ-35471, GOC:yaf, PMID:11153268, UniPathway:UPA00991]


id: GO:0090533
name: cation-transporting ATPase complex
namespace: cellular_component
def:
  "Protein complex that carries out the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in)." [GOC:BHF]


id: GO:0090534
name: calcium ion-transporting ATPase complex
namespace: cellular_component
def:
  "Protein complex that carries out the reaction: ATP + H2O + Ca2+(out) = ADP + phosphate + Ca2+(in)." [GOC:BHF]


id: GO:0090535
name: WICH complex
namespace: cellular_component
def:
  "An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and WSTF (Williams Syndrome Transcription Factor). WICH plays roles in regulation of RNAP I and III transcription and in DNA replication and repair." [GOC:krc, PMID:15284901, PMID:16568949, PMID:21810179]


id: GO:0090536
name: NoRC complex
namespace: cellular_component
def:
  "An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and a Tip5 homolog. In mammals, NoRC is involved in regulation of transcription from RNAP I and RNA polymerase III promoters." [GOC:krc]


id: GO:0090537
name: CERF complex
namespace: cellular_component
def:
  "An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2L in mammals, which contain two ISWI homologs) and a CECR2 homolog. In mammals, CERF is involved in regulation of transcription from RNA polymerase II promoters." [GOC:krc]


id: GO:0090539
name: peptide pheromone export by transmembrane transport
namespace: biological_process
def:
  "The directed movement of a peptide pheromone across a membrane and out of a cell." [GOC:al, GOC:tb, GOC:vw]


id: GO:0090540
name: bacterial cellulose biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as it occurs in certain types of bacteria, mainly Acetobacter, Sarcina ventriculi and Agrobacteria." [DOI:10.1016/S0268-005X(87)80024-3, DOI:10.1023/A\:1009272904582, GOC:tb, GOC:yaf, UniPathway:UPA00694]


id: GO:0090541
name: MIT domain binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with the MIT domain of a protein. The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking." [GOC:pm, InterPro:IPR007330]


id: GO:0090542
name: ELYC domain binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with the ELYC domain of a protein. The ELYC domain is an approximately 150 amino acid sequence which contains a highly conserved tetrapeptide sequence, ELYC." [GOC:pm, PMID:18032582, PMID:19525971]


id: GO:0090543
name: Flemming body
namespace: cellular_component
def:
  "A cell part that is the central region of the midbody characterized by a gap in alpha-tubulin staining. It is a dense structure of antiparallel microtubules from the central spindle in the middle of the intercellular bridge." [GOC:pm, PMID:18641129, PMID:22522702]


id: GO:0090544
name: BAF-type complex
namespace: cellular_component
def:
  "A SWI/SNF-type complex that contains a subunit from the BAF (Brahma-Associated Factor) family." [GOC:krc, GOC:tb]


id: GO:0090545
name: CHD-type complex
namespace: cellular_component
def:
  "A SWI/SNF-type complex that contains a subunit from the CHD(Chromodomain helicase DNA-binding) family. The CHD family is characterized by two signature sequence motifs: tandem chromodomains located in the N-terminal region, and the SNF2-like ATPase domain located in the central region of the protein structure." [GOC:krc, GOC:tb, PMID:17350655]


id: GO:0090546
name: chlorophyll fluorescence
namespace: biological_process
def:
  "The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is re-emitted as light." [PMID:10938857]


id: GO:0090547
name: response to low humidity
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere." [GOC:tb]


id: GO:0090548
name: response to nitrate starvation
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nitrate." [GOC:tair_curators]


id: GO:0090549
name: response to carbon starvation
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source." [GOC:tair_curators, PMID:18245858]


id: GO:0090550
name: response to molybdenum starvation
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of molybdenum." [GOC:tair_curators]


id: GO:0090551
name: response to manganese starvation
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of manganese." [GOC:tair_curators]


id: GO:0090552
name: unicellular trichome apex
namespace: cellular_component
def:
  "A cell projection part that is the apical most portion of a unicellular trichome." [GOC:PO_curators, PO:0025537]


id: GO:0090553
name: unicellular trichome tip
namespace: cellular_component
def:
  "A cell projection part that is the apical most portion of a unicellular trichome apex." [GOC:PO_curators]


id: GO:0090554
name: phosphatidylcholine-translocating ATPase activity
namespace: molecular_function
def:
  "Catalysis of the movement of phosphatidylcholine from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP." [CHEBI:64612, GOC:ab, PMID:16452632, RHEA:38584]


id: GO:0090555
name: phosphatidylethanolamine-translocating ATPase activity
namespace: molecular_function
def:
  "Catalysis of the movement of phosphatidylethanolamine from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP." [CHEBI:64612, GOC:ab, PMID:16452632, RHEA:36440]


id: GO:0090556
name: phosphatidylserine-translocating ATPase activity
namespace: molecular_function
def:
  "Catalysis of the movement of phosphatidylserine from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP." [CHEBI:57262, GOC:ab, PMID:16452632, PMID:20224745, RHEA:38568]


id: GO:0090557
name: establishment of endothelial intestinal barrier
namespace: biological_process
def:
  "The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition." [GOC:krc, PMID:22155109]


id: GO:0090558
name: plant epidermis development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the plant epidermis over time, from its formation to the mature structure." [GOC:tb]


id: GO:0090559
name: regulation of membrane permeability
namespace: biological_process
def:
  "Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by a membrane." [GOC:kmv, PMID:22677064]


id: GO:0090560
name: 2-(3-amino-3-carboxypropyl)histidine synthase activity
namespace: molecular_function
def:
  "Catalysis of the reaction S-adenosyl-L-methionine + L-histidine-[translation elongation factor 2] = S-methyl-5-thioadenosine + 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2]." [BRENDA:2.5.1.108, GOC:pde, PMID:15485916]


id: GO:0090561
name: nuclear migration during mitotic telophase
namespace: biological_process
def:
  "The dynein-driven microtubule based nuclear migration, whereby daughter nuclei are positioned away from the cell division site prior to cytokinesis." [GOC:vw, PMID:23087209]


id: GO:0090562
namespace: molecular_function
name:
  protein-N(PI)-phosphohistidine-N,N'-diacetylchitobiose phosphotransferase system transporter activity

def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N,N'-diacetylchitobiose(out) = protein histidine + N,N'-diacetylchitobiose phosphate(in)." [GOC:am, PMID:10913119]


id: GO:0090563
name: protein-phosphocysteine-sugar phosphotransferase activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + sugar(out) = protein cysteine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport." [GOC:am]


id: GO:0090564
name: protein-phosphocysteine-glucose phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucose(out) = protein cysteine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport." [GOC:am]


id: GO:0090565
name: protein-phosphocysteine-mannitol phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannitol(out) = protein cysteine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport." [GOC:am]


id: GO:0090566
name: protein-phosphocysteine-N,N'-diacetylchitobiose phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N,N'-diacetylchitobiose(out) = protein cysteine + N,N'-diacetylchitobiose phosphate(in)." [GOC:am, PMID:10913119]


id: GO:0090567
name: reproductive shoot system development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of a reproductive shoot system over time, from its formation to the mature structure." [GOC:pj]


id: GO:0090568
name: nuclear transcriptional repressor complex
namespace: cellular_component
def:
  "A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription." [GOC:tb]


id: GO:0090569
name: cytoplasmic transcriptional repressor complex
namespace: cellular_component
def:
  "A protein complex, located in the cytoplasm, that possesses activity that prevents or downregulates transcription." [GOC:tb]


id: GO:0090570
name: RNA polymerase I transcription repressor complex
namespace: cellular_component
def:
  "A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase I promoter." [GOC:tb]


id: GO:0090571
name: RNA polymerase II transcription repressor complex
namespace: cellular_component
def:
  "A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase II promoter." [GOC:tb]


id: GO:0090572
name: RNA polymerase III transcription repressor complex
namespace: cellular_component
def:
  "A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase III promoter." [GOC:tb]


id: GO:0090573
name: RNA polymerase IV transcription repressor complex
namespace: cellular_component
def:
  "A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase IV promoter." [GOC:tb]


id: GO:0090574
name: RNA polymerase V transcription repressor complex
namespace: cellular_component
def:
  "A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter." [GOC:tb]


id: GO:0090575
name: RNA polymerase II transcription factor complex
namespace: cellular_component
def:
  "A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase II." [GOC:tb]


id: GO:0090576
name: RNA polymerase III transcription factor complex
namespace: cellular_component
def:
  "A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase III." [GOC:tb]


id: GO:0090577
name: RNA polymerase IV transcription factor complex
namespace: cellular_component
def:
  "A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase IV." [GOC:tb]


id: GO:0090578
name: RNA polymerase V transcription factor complex
namespace: cellular_component
def:
  "A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase V." [GOC:tb]


id: GO:0090579
name: dsDNA loop formation
namespace: biological_process
def:
  "The formation and maintenance of DNA loops that juxtapose separated regions on the same dsDNA molecule." [GOC:jh, PMID:15950878]


id: GO:0090580
name: phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands
namespace: molecular_function
def:
  "Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated oligonucleotides." [GOC:pde, GOC:rb, PMID:11238902]


id: GO:0090581
name: protein-phosphocysteine-mannosylglycerate-phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannosylglycerate(out) = protein cysteine + mannosylglycerate phosphate(in)." [PMID:14645248]


id: GO:0090582
name: protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-fructose(out) = protein cysteine + D-fructose-1-phosphate(in)." [PMID:8626640]


id: GO:0090583
name: protein-phosphocysteine-D-sorbitol-phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-sorbitol(out) = protein cysteine + D-sorbitol-1-phosphate(in)." [PMID:8875915]


id: GO:0090584
name: protein-phosphocysteine-galactitol-phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + galactitol(out) = protein cysteine + galactitol-6-phosphate(in)." [PMID:8955298]


id: GO:0090585
name: protein-phosphocysteine-L-ascorbate-phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + L-ascorbate(out) = protein cysteine + L-ascorbate-6-phosphate(in)." [PMID:15153772]


id: GO:0090586
name: protein-phosphocysteine-N-acetylglucosamine phosphotransferase system transporter activity
namespace: molecular_function
def:
  ": Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylglucosamine (out) = protein cysteine + N-acetylglucosamine-6-phosphate (in)." [PMID:8246840]


id: GO:0090587
name: protein-phosphocysteine-glucosamine phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucosamine (out) = protein cysteine + glucosamine-6-phosphate (in)." [PMID:8246840]


id: GO:0090588
name: protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylmuramate (out) = protein cysteine + N-acetylmuramate-6-phosphate (in)." [PMID:15060041]


id: GO:0090589
name: protein-phosphocysteine-trehalose phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + trehalose (out) = protein cysteine + trehalose-6-phosphate (in)." [PMID:7608078]


id: GO:0090590
name: protein-N(PI)-phosphohistidine-D-glucosamine phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + D-glucosamine(out) = protein histidine + glucosamine-6-phosphate(in)." [PMID:8246840]


id: GO:0090591
name: protein-N(PI)-phosphohistidine-N-acetyl-mannosamine phosphotransferase system transporter activity
namespace: molecular_function
def:
  "Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetyl-mannosamine(out) = protein histidine +N-acetyl- mannosamine-6-phosphate(in)." [PMID:9864311]


id: GO:0090592
name: DNA synthesis involved in DNA replication
namespace: biological_process
def:
  "Synthesis of DNA that is a part of the process of duplicating one or more molecules of DNA." [GOC:vw]


id: GO:0090593
name: peptidyl-histidine autophosphorylation
namespace: biological_process
def:
  "The phosphorylation by a protein of one or more of its own histidine residues, or a histidine residue on an identical protein." [PMID:15947782, PMID:8962061]


id: GO:0090594
name: inflammatory response to wounding
namespace: biological_process
def:
  "The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents." [GOC:add]


id: GO:0090595
name: acetyl-CoA:L-lysine N6-acetyltransferase
namespace: molecular_function
def:
  "Catalysis of the reaction: L-lysine + acetyl-CoA = N6-acetyl-L-lysine + CoA + H(+)." [MetaCyc:LYSACET-RXN]


id: GO:0090596
name: sensory organ morphogenesis
namespace: biological_process
def:
  "Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions." [GOC:kmv, ISBN:978-0199210893]


id: GO:0090597
name: nematode male tail mating organ morphogenesis
namespace: biological_process
def:
  "The process in which the anatomical structures of the nematode male tail mating organ are generated and organized. The male tail is a sensory organ required for mating and, in C. elegans, consists of ray sensilla, an acellular cuticular fan, a sensory hook, and protracting, copulatory spicules." [GOC:kmv, PMID:1782863, PMID:18050419, PMID:7409314]


id: GO:0090598
name: male anatomical structure morphogenesis
namespace: biological_process
def:
  "The processes by which anatomical structures that are only present in the male organism are generated and organized." [GOC:kmv, GOC:tb]


id: GO:0090599
name: alpha-glucosidase activity
namespace: molecular_function
def:
  "Catalysis of the hydrolysis of terminal, non-reducing alpha-linked alpha-D-glucose residue with release of alpha-D-glucose." [GOC:tb]


id: GO:0090600
name: alpha-1,3-glucosidase activity
namespace: molecular_function
def:
  "Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->3)-linked alpha-D-glucose residues with release of alpha-D-glucose." [GOC:sd, GOC:tb]


id: GO:0090602
name: sieve element enucleation
namespace: biological_process
def:
  "The process in which nucleated precursor cells lose their nucleus as part of sieve element differentiation. The nuclear contents are released and degraded in the cytoplasm at the same time as other organelles are rearranged and the cytosol is degraded." [GOC:tb, PMID:25081480]


id: GO:0090603
name: sieve element differentiation
namespace: biological_process
def:
  "The process whereby a relatively unspecialized cell acquires specialized features of a sieve element." [GOC:tb]


id: GO:0090604
name: surface biofilm formation
namespace: biological_process
def:
  "A process in which planktonically growing microorganisms grow at the surface of a liquid-air interface and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription." [GOC:di, GOC:tb]


id: GO:0090605
name: submerged biofilm formation
namespace: biological_process
def:
  "A process in which planktonically growing microorganisms aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription." [GOC:di, GOC:tb]


id: GO:0090606
name: single-species surface biofilm formation
namespace: biological_process
def:
  "A process in which planktonically growing microorganisms of the same species grow at the surface of a liquid-air interface and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription." [GOC:di, GOC:tb]


id: GO:0090607
name: multi-species surface biofilm formation
namespace: biological_process
def:
  "A process in which planktonically growing microorganisms of different species grow at the surface of a liquid-air interface and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription." [GOC:di, GOC:tb]


id: GO:0090608
name: multi-species submerged biofilm formation
namespace: biological_process
def:
  "A process in which planktonically growing microorganisms of different species aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription." [GOC:di, GOC:tb]


id: GO:0090609
name: single-species submerged biofilm formation
namespace: biological_process
def:
  "A process in which planktonically growing microorganisms of the same species aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription." [GOC:di, GOC:tb]


id: GO:0090610
name: bundle sheath cell fate specification
namespace: biological_process
def:
  "The process in which a cell becomes capable of differentiating autonomously into a bundle sheath cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed." [GOC:tb, PMID:24517883]


id: GO:0090611
name: ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the breakdown of a protein or peptide, via the multivesicular body (MVB) sorting pathway; proteins are sorted into MVBs, and delivered to a lysosome/vacuole for degradation.  This process is independent of ubiquitination." [PMID:22547407]


id: GO:0090612
name: cAMP deaminase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: cyclic adenosine monophosphate + H2O = cyclic inosine monophosphate + NH3." [PMID:24074367]


id: GO:0090614
name: 5'-methylthioadenosine deaminase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: 5'methyl thioadenosine + H2O = 5'methyl thioinosine + NH3." [PMID:23968233]


id: GO:0090615
name: mitochondrial mRNA processing
namespace: biological_process
def:
  "Steps involved in processing precursor RNAs arising from transcription of operons in the mitochondrial genome into mature mRNAs." [GOC:tb, PMID:25181358]


id: GO:0090616
name: mitochondrial mRNA 3'-end processing
namespace: biological_process
def:
  "Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome." [GOC:tb, PMID:25181358]


id: GO:0090617
name: mitochondrial mRNA 5'-end processing
namespace: biological_process
def:
  "Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome." [GOC:tb, PMID:25181358]


id: GO:0090618
name: DNA clamp unloading
namespace: biological_process
def:
  "The process of removing the PCNA complex from DNA when Okazaki fragments are completed or the replication fork terminates." [GOC:rb, PMID:23499004]


id: GO:0090619
name: meiotic spindle pole
namespace: cellular_component
def:
  "Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules." [GOC:ha, PMID:18250200]


id: GO:0090620
name: APC-Cdc20 complex
namespace: cellular_component
def:
  "An anaphase promoting complex bound to the \"fizzy family\" APC activator Cdc20/Slp1 which regulates the metaphase anaphase transition by activating the APC/C to target the anaphase inhibitor securin and promotes sister chromatid separation." [GOC:vw, PMID:10921876]


id: GO:0090621
name: APC-fizzy-related complex
namespace: cellular_component
def:
  "An anaphase promoting complex bound to the \"fizzy-related family\" APC activator FZR1/Cdh1/Srw1 that regulates mitotic exit by activating the APC/C to target mitotic cyclins for destruction during anaphase and telophase. Is also active during G1." [GOC:vw, PMID:10921876]


id: GO:0090622
name: APC-fizzy related complex activity
namespace: molecular_function
def:
  "A ubiquitin-protein ligase activity that increases the rate or extent of the mitotic exit." [GOC:vw, PMID:10921876]


id: GO:0090623
name: activation of APC-fizzy related complex activity
namespace: biological_process
def:
  "Any process that initiates the ubiquitin ligase activity of the APC-fizzy related complex that regulates the exit from mitosis." [GOC:vw, PMID:10921876]


id: GO:0090624
name: endoribonuclease activity, cleaving miRNA-paired mRNA
namespace: molecular_function
def:
  "Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA." [GOC:BHF, GOC:BHF_miRNA, GOC:rph, PMID:15260970, PMID:19239888]


id: GO:0090625
name: mRNA cleavage involved in gene silencing by siRNA
namespace: biological_process
def:
  "The process in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a siRNA will typically direct cleavage by base pairing with perfect or near-perfect complementarity to the target mRNA." [GOC:BHF, GOC:BHF_miRNA, GOC:rph, PMID:15260970]


id: GO:0090626
name: plant epidermis morphogenesis
namespace: biological_process
def:
  "The process in which the anatomical structures of the plant epidermis are generated and organized." [GOC:tb]


id: GO:0090627
name: plant epidermal cell differentiation
namespace: biological_process
def:
  "The process in which a relatively unspecialized cell acquires specialized features of a plant epidermal cell." [GOC:tb]


id: GO:0090628
name: plant epidermal cell fate specification
namespace: biological_process
def:
  "The process in which a cell becomes capable of differentiating autonomously into a plant epidermal cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed." [GOC:tb]


id: GO:0090629
name: lagging strand initiation
namespace: biological_process
def:
  "The process in which the synthesis of DNA from a template strand in a net 3' to 5' direction is started." [GOC:mah, GOC:tb]


id: GO:0090630
name: activation of GTPase activity
namespace: biological_process
def:
  "Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP." [GOC:dph, GOC:mah, GOC:tb]


id: GO:0090631
name: pre-miRNA transporter activity
namespace: molecular_function
def:
  "Enables the directed movement of pre-miRNAs between the nucleus and the cytoplasm of a cell." [GOC:BHF, GOC:BHF_miRNA, GOC:rph, PMID:14681208]


id: GO:0090632
name: N-glycolylneuraminic acid (Neu5Gc) cytidylyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: CTP + Neu5Gc = diphosphate + CMP-Neu5Gc." [ISBN:978-1-60805-067-3, PMID:11479279, PMID:8381411]


id: GO:0090633
name: keto-deoxynonulosonic acid (KDN) cytidylyltransferase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: CTP + KDN = diphosphate + CMP-KDN." [ISBN:978-1-60805-067-3, PMID:11479279, PMID:8381411]


id: GO:0090635
name: extracellular core region of desmosome
namespace: cellular_component
def:
  "The desmosomal part containing the desmosomal cadherins, desmogleins and desmocollins, that establish contact and adhere to neighboring cells in a Ca2+-dependent manner." [PMID:20066089]


id: GO:0090636
name: outer dense plaque of desmosome
namespace: cellular_component
def:
  "The desmosomal part containing plakoglobins, plakophilins, the N-termini of desmoplakins,  as well as the cytoplasmic tails of the desmosomal cadherins, which together attach the plaque to the plasma membrane." [PMID:20066089]


id: GO:0090637
name: inner dense plaque of desmosome
namespace: cellular_component
def:
  "The desmosomal part containing the C-termini of desmoplakins which interact with the keratin intermediate filaments, serving to tether the intermediate filaments to the plasma membrane." [PMID:20066089]


id: GO:0090638
name: phosphatidylcholine biosynthesis from phosphatidylethanolamine
namespace: biological_process
def:
  "The phosphatidylcholine biosynthetic process that depends on direct conversion of the phosphatidyl-base phosphatidylethanolamine to phosphatidylcholine by successive methylations." [MetaCyc:PWY-6825]


id: GO:0090639
name: phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol
namespace: biological_process
def:
  "The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine." [MetaCyc:PWY-6826]


id: GO:0090640
name: phosphatidylcholine biosynthesis from sn-glycero-3-phosphocholine
namespace: biological_process
def:
  "The phosphatidylcholine biosynthetic process that involves the two-step acylation of sn-glycero-3-phosphocholine to a phosphatidylcholine." [MetaCyc:PWY-7470, PMID:24329598]


id: GO:0090641
name: microsporidian-type endospore
namespace: cellular_component
def:
  "The middle layer in a microsporidian spore wall that lies under the exospore and outside the plasma membrane, containing chitin and proteins." [PMID:19457051]


id: GO:0090642
name: microsporidian-type exospore
namespace: cellular_component
def:
  "The dense, protein rich outermost layer of a microsporidian spore wall that lies above the endospore." [PMID:19457051, PMID:25363531]


id: GO:0090643
name: inflorescence phyllotactic patterning
namespace: biological_process
def:
  "The radial pattern formation process that results in the formation of flowers around a central axis in an inflorescence meristem." [PMID:25352850]


id: GO:0090644
name: age-related resistance
namespace: biological_process
def:
  "An innate immune response that is positively correlated with host plant development. As a plant develops, its innate resistance to pathogenic infections increases. The mechanisms involved in age-related resistance differ in nature or in aspects of regulation from the hypersensitive response (HR), systemic acquired resistance (SAR), or induced systemic resistance (ISR)." [PMID:17635216, PMID:19694953]


id: GO:0090645
name: APC-Cdc20 complex inhibitor activity
namespace: molecular_function
def:
  "Prevents the activation of the APC-Cdc20 complex activity to negatively regulate the mitotic metaphase anaphase transition." [GOC:vw]


id: GO:0090646
name: mitochondrial tRNA processing
namespace: biological_process
def:
  "The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group,  in the mitochondrion." [GOC:vw]


id: GO:0090647
name: modulation of age-related behavioral decline
namespace: biological_process
def:
  "Any process that modulates the processes that arise as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory." [GOC:cjm, GOC:kmv, PMID:20523893]


id: GO:0090648
name: response to environmental enrichment
namespace: biological_process
def:
  "Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the provision of a combination of complex inanimate and social stimulations in the organism's housing environment." [GOC:sl, PMID:23644055, PMID:25934034]


id: GO:0090649
name: response to oxygen-glucose deprivation
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose." [GOC:sl, PMID:21525936]


id: GO:0090650
name: cellular response to oxygen-glucose deprivation
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose." [GOC:sl, PMID:21525936]


id: GO:0090651
name: apical cytoplasm
namespace: cellular_component
def:
  "The region of the cytoplasm located at the apical side of the cell. Used in reference to animal polarized epithelial cells." [PMID:17494872]


id: GO:0090652
name: basolateral cytoplasm
namespace: cellular_component
def:
  "The region of the cytoplasm located at the basolateral side of the cell. Used in reference to animal polarized epithelial cells." [PMID:17494872]


id: GO:0090653
name: apical recycling endosome
namespace: cellular_component
def:
  "Tubulo-vesicular structure located in the apical cytoplasm that participates in apical cargo recycling in polarized epithelial cells." [PMID:12669082, PMID:16394106, PMID:17494872, PMID:21170358, PMID:9405315]


id: GO:0090654
name: basolateral recycling endosome
namespace: cellular_component
def:
  "Tubulo-vesicular structure located in the basolateral cytoplasm that participates in basolateral cargo recycling in polarized epithelial cells." [PMID:11389442, PMID:16394106, PMID:17494872, PMID:21170358, PMID:9405315]


id: GO:0090655
name: double-stranded/single-stranded junction telomeric DNA binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with the junction formed at the point where double-stranded telomeric DNA becomes a single-stranded G-rich telomeric DNA 3' overhang." [GOC:BHF, GOC:BHF_telomere, GOC:bhm, GOC:nc, PMID:21852327]


id: GO:0090656
name: t-circle formation
namespace: biological_process
def:
  "A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD)." [GOC:BHF, GOC:BHF_telomere, GOC:nc, PMID:19214183, PMID:19581589, PMID:19809492, PMID:19858100]


id: GO:0090657
name: telomeric loop disassembly
namespace: biological_process
def:
  "The telomere maintenance process in which telomeric loops are disassembled to permit efficient telomere replication." [GOC:BHF, GOC:BHF_telomere, GOC:nc, PMID:22579284]


id: GO:0090658
name: cone matrix sheath
namespace: cellular_component
def:
  "A biochemically and structurally distinct domain of the retinal interphotoreceptor matrix that is specifically associated with cone photoreceptor cell inner and outer segments." [GOC:mr, PMID:2055688]


id: GO:0090659
name: walking behavior
namespace: biological_process
def:
  "The behavior of an organism relating to the progression of that organism along the ground by the process of lifting and setting down each leg." [GOC:tb]


id: GO:0090660
name: cerebrospinal fluid circulation
namespace: biological_process
def:
  "The neurological system process driven by motile cilia on ependymal cells of the brain by which cerebrospinal fluid circulates from the sites of secretion to the sites of absorption. In ventricular cavities, the flow is unidirectional and rostrocaudal, in subarachnoid spaces, the flow is multi-directional." [GOC:mgi_curators, PMID:22100360, PMID:24229449]


id: GO:0090661
name: box H/ACA telomerase RNP complex
namespace: cellular_component
def:
  "A box H/ACA ribonucleoprotein complex that contains the RNA component of vertebrate telomerase, the enzyme essential for the replication of chromosome termini in most eukaryotes. This ribonucleoprotein complex is a structural box H/ACA RNP, which does not have the catalytic pseudouridylation function shared by the majority of H/ACA RNPs present in the cell." [GOC:BHF, GOC:BHF_telomere, GOC:jbu, PMID:22527283]


id: GO:0090662
name: ATP hydrolysis coupled transmembrane transport
namespace: biological_process
def:
  "The transport of molecules across a membrane and against an electrochemical gradient, using energy from ATP hydrolysis." [GOC:BHF, GOC:mtg_cardiac_conduct_nov11, GOC:nc, GOC:tb, PMID:18075585]


id: GO:0090663
name: galanin-activated signaling pathway
namespace: biological_process
def:
  "The series of molecular signals generated as a consequence of the peptide neurotransmitter galanin binding to a cell surface receptor." [GOC:lb, PMID:25691535]


id: GO:0090664
name: response to high population density
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a higher than normal number of multicellular organisms living per unit area." [GOC:mr, PMID:26439857]


id: GO:0090665
name: glycoprotein complex
namespace: cellular_component
def:
  "A protein complex containing at least one glycosylated protein, may be held together by both covalent and noncovalent bonds." [GOC:pf, PMID:7693675, PMID:8662961]


id: GO:0090666
name: scaRNA localization to Cajal body
namespace: biological_process
def:
  "A process in which a small Cajal body-specific RNA is transported to, or maintained in, a Cajal body." [GOC:BHF, GOC:BHF_telomere, GOC:nc, PMID:25467444]


id: GO:0090667
name: cell chemotaxis to vascular endothelial growth factor
namespace: biological_process
def:
  "The directed movement of a motile cell in response to the presence of vascular endothelial growth factor (VEGF)." [GOC:BHF, GOC:BHF_miRNA, GOC:rph, PMID:21885851]


id: GO:0090668
name: endothelial cell chemotaxis to vascular endothelial growth factor
namespace: biological_process
def:
  "The directed movement of an endothelial cell in response to the presence of vascular endothelial growth factor (VEGF)." [GOC:BHF, GOC:BHF_miRNA, GOC:rph, PMID:21885851]


id: GO:0090669
name: telomerase RNA stabilization
namespace: biological_process
def:
  "Prevention of degradation of telomerase RNA (TERC) molecules." [GOC:BHF, GOC:BHF_telomere, GOC:nc, PMID:25467444]


id: GO:0090670
name: RNA localization to Cajal body
namespace: biological_process
def:
  "A process in which an RNA is transported to, or maintained in, a Cajal body." [GOC:BHF, GOC:BHF_telomere, GOC:nc, PMID:25467444]


id: GO:0090671
name: telomerase RNA localization to Cajal body
namespace: biological_process
def:
  "A process in which telomerase RNA (TERC) is transported to, or maintained in, a Cajal body." [GOC:BHF, GOC:BHF_telomere, GOC:nc, PMID:25467444]


id: GO:0090672
name: telomerase RNA localization
namespace: biological_process
def:
  "Any process in which telomerase RNA is transported to, or maintained in, a specific location." [GOC:BHF, GOC:BHF_telomere, GOC:nc, PMID:25467444]


id: GO:0090673
name: endothelial cell-matrix adhesion
namespace: biological_process
def:
  "The binding of an endothelial cell to the extracellular matrix via adhesion molecules." [GOC:bc, GOC:BHF, GOC:BHF_miRNA, PMID:19460962]


id: GO:0090674
name: endothelial cell-matrix adhesion via fibronectin
namespace: biological_process
def:
  "The binding of an endothelial cell to the extracellular matrix via fibronectin." [GOC:bc, GOC:BHF, GOC:BHF_miRNA, PMID:19460962]


id: GO:0090675
name: intermicrovillar adhesion
namespace: biological_process
def:
  "The biological adhesion process by which adjacent microvilli attach to each other through Ca(2+)-dependent adhesion links made of protocadherin-24 and mucin-like protocadherin." [GOC:lb, PMID:24725409]


id: GO:0093001
name: glycolysis from storage polysaccharide through glucose-1-phosphate
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the breakdown of a storage polysaccharide into pyruvate through a glucose-1-phosphate intermediate, with the concomitant production of a small amount of ATP and the reduction of NAD to NADH." [GOC:dph, GOC:glycolysis]


id: GO:0093002
name: response to nematicide
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nematicide stimulus. Nematicides are chemicals used to kill nematodes." [GOC:kvm, PMID:22301316]


id: GO:0097001
name: ceramide binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with any ceramide, a class of lipids that is composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes." [CHEBI:17761, GOC:sart]


id: GO:0097002
name: mitochondrial inner boundary membrane
namespace: cellular_component
def:
  "The portion of the mitochondrial inner membrane that is not invaginated to form cristae. The inner boundary membrane lies parallel to the outer membrane." [GOC:mcc, PMID:16054341, PMID:19019989]


id: GO:0097003
name: adipokinetic hormone receptor activity
namespace: molecular_function
def:
  "Combining with an adipokinetic hormone to initiate a change in cell activity. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis." [GOC:sart, PMID:11904407]


id: GO:0097004
name: adipokinetic hormone binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with an adipokinetic hormone. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis." [GOC:sart, PMID:11904407]


id: GO:0097005
name: adipokinetic hormone receptor binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with an adipokinetic hormone receptor. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis." [GOC:sart, PMID:11904407]


id: GO:0097006
name: regulation of plasma lipoprotein particle levels
namespace: biological_process
def:
  "Any process involved in the maintenance of internal levels of plasma lipoprotein particles within an organism." [GOC:BHF]


id: GO:0097007
name: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: (EE)-geranyllinalool + NADPH + O2 = 4,8,12-trimethyl-1,3,7,11-tridecatetraene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C18-farnesylacetone and then cleaved to produce 4,8,12-trimethyl-1,3,7,11-tridecatetraene (TMTT) and acetone." [GOC:kad, MetaCyc:RXN-8620, PMID:21088219]


id: GO:0097008
name: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: (E)-nerolidol + NADPH + O2 = (3E)-4,8-dimethylnona-1,3,7-triene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C11-geranylacetone and then cleaved to produce (3E)-4,8-dimethylnona-1,3,7-triene (DMNT) and acetone." [GOC:kad, MetaCyc:RXN-8619, PMID:21088219]


id: GO:0097009
name: energy homeostasis
namespace: biological_process
def:
  "Any process involved in the balance between food intake (energy input) and energy expenditure." [GOC:yaf, PMID:15919751]


id: GO:0097010
name: eukaryotic translation initiation factor 4F complex assembly
namespace: biological_process
def:
  "The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 4F complex." [GOC:BHF, GOC:ebc, PMID:18337562]


id: GO:0097011
name: cellular response to granulocyte macrophage colony-stimulating factor stimulus
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus." [GOC:BHF, GOC:ebc, PMID:7901744]


id: GO:0097012
name: response to granulocyte macrophage colony-stimulating factor
namespace: biological_process
def:
  "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus." [GOC:pr]


id: GO:0097014
name: ciliary plasm
namespace: cellular_component
def:
  "All of the contents of a cilium, excluding the plasma membrane surrounding the cilium." [GOC:BHF, GOC:cilia, GOC:dos, PMID:17895364]


id: GO:0097015
name: bacterial-type flagellar cytoplasm
namespace: cellular_component
def:
  "All of the contents of a bacterial-type flagellum, excluding the plasma membrane surrounding the flagellum." [GOC:BHF]


id: GO:0097016
name: L27 domain binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with a L27 domain of a protein. L27 is composed of conserved negatively charged amino acids and a conserved aromatic amino acid. L27 domains can assemble proteins involved in signaling and establishment and maintenance of cell polarity into complexes by interacting in a heterodimeric manner." [GOC:BHF, PMID:15241471, PMID:17237226, Prosite:PDOC51022]


id: GO:0097017
name: renal protein absorption
namespace: biological_process
def:
  "A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686)." [GOC:yaf, PMID:18431508]


id: GO:0097018
name: renal albumin absorption
namespace: biological_process
def:
  "A renal system process in which albumin is taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron." [GOC:yaf, PMID:18431508]


id: GO:0097019
name: neurotransmitter receptor catabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the breakdown of neurotransmitter receptors." [GOC:kmv]


id: GO:0097020
name: COPII adaptor activity
namespace: molecular_function
def:
  "The binding activity of a molecule that brings together the COPII vesicle proteins and one or more other molecules, permitting them to function in a coordinated way." [GOC:rb, PMID:16957051, PMID:20236934]


id: GO:0097021
name: lymphocyte migration into lymphoid organs
namespace: biological_process
def:
  "The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen." [GOC:BHF, GOC:pr, PMID:18379575]


id: GO:0097022
name: lymphocyte migration into lymph node
namespace: biological_process
def:
  "The movement of a lymphocyte within the lymphatic system into a lymph node, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen." [GOC:BHF, GOC:pr, PMID:18379575]


id: GO:0097023
name: fructose 6-phosphate aldolase activity
namespace: molecular_function
def:
  "Catalysis of the reaction: D-fructose-6-phosphate = dihydroxyacetone + D-glyceraldehyde-3-phosphate." [GOC:imk, PMID:11120740, PMID:21290439]


id: GO:0097025
name: MPP7-DLG1-LIN7 complex
namespace: cellular_component
def:
  "A heterotrimeric protein complex formed by the association of MMP7, DLG1 and either LIN7A or LIN7C; regulates the stability and localization of DLG1 to cell junctions." [GOC:BHF, PMID:17237226]


id: GO:0097026
name: dendritic cell dendrite assembly
namespace: biological_process
def:
  "Formation of dendrites, branched cellular projections (or cytoplasmic extension) that are extended from the surface of a dendritic immune cell, and which enable the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells." [CL:0000451, GOC:BHF, PMID:12200351]


id: GO:0097027
name: ubiquitin-protein transferase activator activity
namespace: molecular_function
def:
  "Increases the activity of a ubiquitin-protein transferase, an enzyme that catalyzes the covalent attachment of ubiquitin to lysine in a substrate protein." [GOC:rb, PMID:18321851]


id: GO:0097028
name: dendritic cell differentiation
namespace: biological_process
def:
  "The process in which a precursor cell type acquires the specialized features of a dendritic cell. A dendritic cell is a leukocyte of dendritic lineage specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation." [CL:0000451, GOC:pr]


id: GO:0097029
name: mature conventional dendritic cell differentiation
namespace: biological_process
def:
  "The process in which antigen-activated dendritic cells acquire the specialized features of a mature conventional dendritic cell. Mature conventional dendritic cells upregulate the surface expression of MHC molecules, chemokine receptors and adhesion molecules, and increase the number of dendrites (cytoplasmic protrusions) in preparation for migration to lymphoid organs where they present antigen to T cells." [GOC:BHF, http://www.rndsystems.com/mini_review_detail_objectname_MR02_DendriticCellMat.aspx, PMID:15845453]


id: GO:0097030
name: CENP-A containing nucleosome binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with a centromere-specific nucleosome, a form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3)." [GOC:jp, PMID:21412236]


id: GO:0097031
name: mitochondrial respiratory chain complex I biogenesis
namespace: biological_process
def:
  "The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together." [GOC:pr]


id: GO:0097032
name: mitochondrial respiratory chain complex II biogenesis
namespace: biological_process
def:
  "The biogenesis of a mitochondrial respiratory chain complex II, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together." [GOC:pr]


id: GO:0097033
name: mitochondrial respiratory chain complex III biogenesis
namespace: biological_process
def:
  "The biogenesis of a mitochondrial respiratory chain complex III (also known as cytochrome bc(1) complex or ubiquinol-cytochrome c reductase), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together." [GOC:mcc]


id: GO:0097034
name: mitochondrial respiratory chain complex IV biogenesis
namespace: biological_process
def:
  "The biogenesis of a mitochondrial respiratory chain complex IV (also known as cytochrome c oxidase complex), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together." [GOC:mcc]


id: GO:0097035
name: regulation of membrane lipid distribution
namespace: biological_process
def:
  "Any process that modulates the proportions or spatial arrangement of lipids in a cellular membrane." [GOC:mah, PMID:18441123, PMID:20823909]


id: GO:0097036
name: regulation of plasma membrane sterol distribution
namespace: biological_process
def:
  "Any process that modulates the proportions or spatial arrangement of sterols in the plasma membrane." [CHEBI:15889, GOC:mah, PMID:18441123, PMID:20823909]


id: GO:0097038
name: perinuclear endoplasmic reticulum
namespace: cellular_component
def:
  "The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes." [GOC:bf, GOC:mah, GOC:mcc, GOC:pr, GOC:vw]


id: GO:0097039
name: protein linear polyubiquitination
namespace: biological_process
def:
  "A protein ubiquitination process in which a linear polymer of ubiquitin, formed by the amino-terminal methionine (M1) of one ubiquitin molecule and by the carboxy-terminal glycine (G76) of the next, is added to a protein." [GOC:jsg, GOC:sp, PMID:21455173, PMID:21455180, PMID:21455181]


id: GO:0097040
name: phthiocerol biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of phthiocerol, a lipid-based 1,3-glycol consisting of (3S,4R)-3-methoxy-4-methylnonacosane having (9R)- and (11S)-hydroxy substituents." [CHEBI:59240, GOC:dph, GOC:ecd, PMID:9201977]


id: GO:0097041
name: phenolic phthiocerol biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of phenolic phthiocerol, a phthiocerol derivative having a 4-hydroxyphenyl substituent at the 29-position." [CHEBI:59237, GOC:dph, GOC:ecd, PMID:9201977]


id: GO:0097042
name: extrinsic component of fungal-type vacuolar membrane
namespace: cellular_component
def:
  "The component of a fungal-type vacuolar membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region." [GOC:jh, PMID:21454883]


id: GO:0097043
name: histone H3-K56 acetylation
namespace: biological_process
def:
  "The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone." [GOC:bf, GOC:pr]


id: GO:0097044
name: histone H3-K56 acetylation in response to DNA damage
namespace: biological_process
def:
  "The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone as a result of the detection of DNA damage within a cell." [GOC:pr, GOC:vw, PMID:18344406]


id: GO:0097045
name: phosphatidylserine exposure on blood platelet
namespace: biological_process
def:
  "A phospholipid scrambling process that results in the appearance of phosphatidylserine on the surface of activated blood platelets, and triggers the clotting system." [GOC:bf, GOC:lf, GOC:pr, PMID:21107324]


id: GO:0097046
name: replication fork progression beyond termination site
namespace: biological_process
def:
  "Regulation of DNA replication by a mechanism that allows a DNA replication fork to progress beyond a termination site, which is a region containing fork pausing elements that influence the progression and merging of DNA replication forks." [GOC:bf, GOC:mcc, GOC:pr, PMID:20797631]


id: GO:0097047
name: DNA replication termination region
namespace: cellular_component
def:
  "A chromosomal region that contains fork pausing elements influencing the progression and merging of DNA replication forks." [GOC:mcc, GOC:pr, PMID:20797631]


id: GO:0097048
name: dendritic cell apoptotic process
namespace: biological_process
def:
  "Any apoptotic process in a dendritic cell, a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation." [CL:0000451, GOC:BHF, GOC:mtg_apoptosis, PMID:15059845]


id: GO:0097049
name: motor neuron apoptotic process
namespace: biological_process
def:
  "Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement." [CL:0000100, GOC:BHF, GOC:mtg_apoptosis, PMID:14523086]


id: GO:0097050
name: type B pancreatic cell apoptotic process
namespace: biological_process
def:
  "Any apoptotic process in a type B pancreatic cell, a cell located towards center of the islets of Langerhans that secretes insulin." [CL:0000169, GOC:BHF, GOC:mtg_apoptosis, PMID:16087305]


id: GO:0097051
name: establishment of protein localization to endoplasmic reticulum membrane
namespace: biological_process
def:
  "The directed movement of a protein to a specific location in the endoplasmic reticulum membrane." [GOC:rb, PMID:9388185]


id: GO:0097052
name: L-kynurenine metabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways involving L-kynurenine, the L-enantiomer of the amino acid kynurenine (3-(2-aminobenzoyl)-alanine)." [CHEBI:16946, GOC:yaf]


id: GO:0097053
name: L-kynurenine catabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the breakdown of L-kynurenine, the L-enantiomer of the amino acid kynurenine (3-(2-aminobenzoyl)-alanine)." [CHEBI:16946, GOC:yaf]


id: GO:0097054
name: L-glutamate biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid." [GOC:yaf]


id: GO:0097055
name: agmatine biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of agmatine ((4-aminobutyl)guanidine, NH2-CH2-CH2-CH2-CH2-NH-C(-NH2)(=NH)). Agmatine is the decarboxylation product of the amino acid arginine and is an intermediate in polyamine biosynthesis. It is synthesized in the brain, stored in synaptic vesicles, accumulated by uptake, released by membrane depolarization, and inactivated by agmatinase." [CHEBI:17431, GOC:pr, GOC:yaf]


id: GO:0097056
name: selenocysteinyl-tRNA(Sec) biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of selenocysteinyl-tRNA(Sec). This process occurs through the following steps: a unique serine-tRNA with a UGA recognizing anticodon is first aminoacylated with serine; this is then phosphorylated by phosphoseryl-tRNA[Ser]Sec kinase; lastly, selenium is swapped for the phosphate on the serine." [CHEBI:13166, GOC:yaf, PMID:15317934, UniPathway:UPA00906]


id: GO:0097057
name: TRAF2-GSTP1 complex
namespace: cellular_component
def:
  "A protein complex comprising tumor necrosis factor (TNF) receptor-associated factor 2 (TRAF2) and glutathione S-transferase pi 1 (GSTP1). This complex is thought to disrupt the TNF signaling cascade, thus down-regulating inflammatory responses." [GOC:BHF, PMID:16636664]


id: GO:0097058
name: CRLF-CLCF1 complex
namespace: cellular_component
def:
  "A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex." [GOC:BHF, PMID:10966616]


id: GO:0097059
name: CNTFR-CLCF1 complex
namespace: cellular_component
def:
  "A protein complex that is composed of two soluble ciliary neurotrophic factor receptor alpha subunits (product of the CNTFR gene) and two molecules of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene). The complex is secreted into the extracellular space." [GOC:BHF, PMID:11285233]


id: GO:0097060
name: synaptic membrane
namespace: cellular_component
def:
  "A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell." [GOC:BHF, PMID:20410104]


id: GO:0097061
name: dendritic spine organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dendritic spine. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission." [GOC:BHF, PMID:20410104]


id: GO:0097062
name: dendritic spine maintenance
namespace: biological_process
def:
  "The organization process that preserves a dendritic spine in a stable functional or structural state. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission." [GOC:BHF, PMID:20410104]


id: GO:0097063
name: cadmium ion sensor activity
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with and responding, e.g. by conformational change, to changes in the cellular level of cadmium (Cd++)." [GOC:rs, PMID:19456862]


id: GO:0097064
name: ncRNA export from nucleus
namespace: biological_process
def:
  "The directed movement of a non-coding RNA transcript (ncRNA) from the nucleus to the cytoplasm." [GOC:dgf, PMID:11352936]


id: GO:0097065
name: anterior head development
namespace: biological_process
def:
  "The process whose specific outcome is the progression of the anterior part of the head over time, from its formation to the mature structure." [GOC:yaf, PMID:14695376, PMID:15857913]


id: GO:0097066
name: response to thyroid hormone
namespace: biological_process
def:
  "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus." [GOC:sjw, PMID:9916872]


id: GO:0097067
name: cellular response to thyroid hormone stimulus
namespace: biological_process
def:
  "A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus." [GOC:sjw, PMID:9916872]


id: GO:0097068
name: response to thyroxine
namespace: biological_process
def:
  "A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus." [GOC:sjw, PMID:9916872]


id: GO:0097069
name: cellular response to thyroxine stimulus
namespace: biological_process
def:
  "A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus." [GOC:sjw, PMID:9916872]


id: GO:0097070
name: ductus arteriosus closure
namespace: biological_process
def:
  "The morphogenesis process in which the ductus arteriosus changes to no longer permit blood flow after birth. The ductus arteriosus is the shunt between the aorta and the pulmonary artery which allows blood to bypass the fetus' lungs." [GOC:hw]


id: GO:0097071
name: interferon regulatory factor complex
namespace: cellular_component
def:
  "A protein complex that consists of two interferon regulatory proteins (IRFs); may be homodimeric or heterodimeric. The activation of a latent closed conformation of IRF in the cytoplasm is triggered by phosphorylation of Ser/Thr residues in a C-terminal region. Phosphorylation stimulates the C-terminal autoinhibitory domain to attain a highly extended conformation triggering dimerization through extensive contacts to a second subunit." [GOC:cna, PMID:20043992]


id: GO:0097072
name: interferon regulatory factor 3 complex
namespace: cellular_component
def:
  "An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 3." [GOC:cna, PMID:12855817, PMID:14556004, Reactome:REACT_7146]


id: GO:0097073
name: interferon regulatory factor 5 complex
namespace: cellular_component
def:
  "An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 5." [GOC:cna, PMID:12138184, PMID:16751392]


id: GO:0097074
name: interferon regulatory factor 7 complex
namespace: cellular_component
def:
  "An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 7." [GOC:cna, PMID:18068231, Reactome:REACT_21965]


id: GO:0097075
name: interferon regulatory factor 3-interferon regulatory factor 7 complex
namespace: cellular_component
def:
  "An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 7." [GOC:cna, PMID:18068231, Reactome:REACT_26957]


id: GO:0097076
name: transforming growth factor beta activated kinase 1 complex
namespace: cellular_component
def:
  "A protein complex that possesses protein kinase activity and activates the I-kappa B kinase complex (IKK) and mitogen-activated protein (MAP) kinases in response to TRAF6 signaling. It comprises the catalytic subunit TAK1 complexed to the regulatory subunits, termed TABs (TAK1-binding subunits)." [GOC:cna, PMID:16410796, PMID:17496917, PMID:18021073]


id: GO:0097077
name: copper ion sensor activity
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with and responding, e.g. by conformational change, to changes in the cellular level of copper(I) (Cu+)." [GOC:rs, PMID:19928961]


id: GO:0097078
name: FAL1-SGD1 complex
namespace: cellular_component
def:
  "A protein complex involved in the 18S rRNA biogenesis. In S. cerevisiae this complex consists of Fal1p and Sgd1p and in humans this complex consists of NOM1 and eIF4AIII subunits." [GOC:rb, PMID:21576267]


id: GO:0097079
name: selenite:proton symporter activity
namespace: molecular_function
def:
  "Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: selenite(out) + H+(out) = selenite(in) + H+(in)." [GOC:mcc, PMID:20861301]


id: GO:0097080
name: plasma membrane selenite transport
namespace: biological_process
def:
  "The directed movement of inorganic selenite (HSeO3-1 at physiological pH) across a plasma membrane." [GOC:mcc, PMID:20861301]


id: GO:0097081
name: vascular smooth muscle cell fate commitment
namespace: biological_process
def:
  "The commitment of cells to a vascular smooth muscle cell fate and their capacity to differentiate into vascular smooth muscle cells. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels." [GOC:BHF]


id: GO:0097082
name: vascular smooth muscle cell fate specification
namespace: biological_process
def:
  "The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels." [GOC:BHF]


id: GO:0097083
name: vascular smooth muscle cell fate determination
namespace: biological_process
def:
  "The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels." [GOC:BHF]


id: GO:0097084
name: vascular smooth muscle cell development
namespace: biological_process
def:
  "The process aimed at the progression of a vascular smooth muscle cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels." [GOC:BHF]


id: GO:0097085
name: interferon regulatory factor 3-interferon regulatory factor 5 complex
namespace: cellular_component
def:
  "An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 5." [GOC:cna, PMID:12138184]


id: GO:0097086
name: amniotic stem cell differentiation
namespace: biological_process
def:
  "The process whereby a relatively unspecialized cell acquires specialized features of an amniotic stem cell. An amniotic stem cell is a mesenchymal stem cell extracted from amniotic fluid. Amniotic stem cells are able to differentiate into various tissue types such as skin, cartilage, cardiac tissue, nerves, muscle, and bone." [CL:0002639, GOC:yaf, PMID:20942606, Wikipedia:Amniotic_stem_cells]


id: GO:0097087
name: interleukin-17A production
namespace: biological_process
def:
  "The appearance of interleukin-17A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:rv, PR:000001138, Wikipedia:Interleukin_17]


id: GO:0097088
name: interleukin-17F production
namespace: biological_process
def:
  "The appearance of interleukin-17F due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels." [GOC:rv, PR:000001142, Wikipedia:Interleukin_17]


id: GO:0097089
name: methyl-branched fatty acid metabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways involving methyl-branched fatty acids, aliphatic monocarboxylic acids with methyl branches on the main chain." [CHEBI:62499, GOC:rs, PMID:19933331]


id: GO:0097090
name: presynaptic membrane organization
namespace: biological_process
def:
  "A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction." [GOC:BHF, GOC:pr, GOC:sjp, PMID:19730411]


id: GO:0097091
name: synaptic vesicle clustering
namespace: biological_process
def:
  "The process that results in grouping synaptic vesicles, prior to release, at a specialized patch of the presynaptic membrane referred to as the active zone." [GOC:ans, GOC:pr, PMID:19900895]


id: GO:0097092
name: polyacyltrehalose metabolic process
namespace: biological_process
def:
  "The chemical reactions and pathways involving polyacyltrehalose, a pentaacylated, trehalose-based glycolipid." [CHEBI:62547, GOC:rs, PMID:19729090]


id: GO:0097093
name: polyacyltrehalose biosynthetic process
namespace: biological_process
def:
  "The chemical reactions and pathways resulting in the formation of polyacyltrehalose, a pentaacylated, trehalose-based glycolipid." [CHEBI:62547, GOC:rs, PMID:19729090]


id: GO:0097094
name: craniofacial suture morphogenesis
namespace: biological_process
def:
  "The process in which any suture between cranial and/or facial bones is generated and organized." [GOC:pr, GOC:sl, Wikipedia:Cranial_sutures, Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system]


id: GO:0097095
name: frontonasal suture morphogenesis
namespace: biological_process
def:
  "The process in which the frontonasal suture, between frontal and nasal bones, is generated and organized." [GOC:pr, GOC:sl, PMID:12416537, Wikipedia:Cranial_sutures, Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system]


id: GO:0097096
name: facial suture morphogenesis
namespace: biological_process
def:
  "The process in which any suture between facial bones is generated and organized." [GOC:pr, GOC:sl, Wikipedia:Cranial_sutures, Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system]


id: GO:0097097
name: nasal suture morphogenesis
namespace: biological_process
def:
  "The process in which the nasal suture is generated and organized." [GOC:pr, GOC:sl, Wikipedia:Cranial_sutures, Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system]


id: GO:0097098
name: DNA/RNA hybrid annealing activity
namespace: molecular_function
def:
  "Facilitates the base-pairing of single-stranded RNA to double-stranded DNA resulting in the formation of R-loops." [GOC:imk, PMID:21699496]


id: GO:0097099
name: structural constituent of albumen
namespace: molecular_function
def:
  "The action of a molecule that contributes to the structural integrity of albumen (also called egg white). Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo." [GOC:jj, Wikipedia:Albumen]


id: GO:0097100
name: supercoiled DNA binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with supercoiled DNA. For example, during replication and transcription, template DNA is negatively supercoiled in the receding downstream DNA and positively supercoiled in the approaching downstream DNA." [GOC:pr, GOC:rph, PMID:20723754, PMID:21345933, Wikipedia:DNA_supercoil]


id: GO:0097101
name: blood vessel endothelial cell fate specification
namespace: biological_process
def:
  "The process involved in the specification of identity of a blood vessel endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. A blood vessel endothelial cell is an endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels." [CL:0002139, GOC:dgh, PMID:21521739]


id: GO:0097102
name: endothelial tip cell fate specification
namespace: biological_process
def:
  "The process involved in the specification of identity of an endothelial tip cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. An endothelial tip cell is a specialized endothelial cell localized to the leading edge of an angiogenic sprout that senses extracellular signals and guides the directed growth of blood vessels." [CL:0000704, GOC:dgh, PMID:21521739]


id: GO:0097103
name: endothelial stalk cell fate specification
namespace: biological_process
def:
  "The process involved in the specification of identity of an endothelial stalk cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. An endothelial stalk cell is a specialized endothelial cell which follows behind the tip cell of an angiogenic sprout." [CL:0002671, GOC:dgh, PMID:21521739]


id: GO:0097104
name: postsynaptic membrane assembly
namespace: biological_process
def:
  "The aggregation, arrangement and bonding together of a set of components to form a postsynaptic membrane, a specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft)." [GOC:BHF, GOC:sjp, PMID:21424692]


id: GO:0097105
name: presynaptic membrane assembly
namespace: biological_process
def:
  "The aggregation, arrangement and bonding together of a set of components to form a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a  specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction." [GOC:BHF, GOC:pr, GOC:sjp, PMID:15797875, PMID:18550748]


id: GO:0097106
name: postsynaptic density organization
namespace: biological_process
def:
  "A process that results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse." [GOC:BHF, GOC:sjp, PMID:21525273]


id: GO:0097107
name: postsynaptic density assembly
namespace: biological_process
def:
  "The aggregation, arrangement and bonding together of a set of components to form a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse." [GOC:BHF, GOC:sjp, PMID:21525273]


id: GO:0097108
name: hedgehog family protein binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with a member of the hedgehog protein family, signaling proteins involved in development." [GOC:BHF, GOC:pr, PMID:10050855]


id: GO:0097109
name: neuroligin family protein binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with a member of the neuroligin protein family, neuronal cell surface proteins that mediate synapse formation." [GOC:BHF, GOC:pr, GOC:sjp, PMID:21424692]


id: GO:0097110
name: scaffold protein binding
namespace: molecular_function
def:
  "Interacting selectively and non-covalently with a scaffold protein. Scaffold proteins are crucial regulators of many key signaling pathways. Although not strictly defined in function, they are known to interact and/or bind with multiple members of a signaling pathway, tethering them into complexes." [GOC:BHF, GOC:sjp, PMID:10433269, Wikipedia:Scaffold_protein]


id: GO:0097111
name: endoplasmic reticulum-Golgi intermediate compartment organization
namespace: biological_process
def:
  "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER)-Golgi intermediate compartment." [GOC:br, PMID:18287528]


id: GO:0097112
name: gamma-aminobutyric acid receptor clustering
namespace: biological_process
def:
  "The receptor clustering process in which gamma-aminobutyric acid (GABA) receptors are localized to distinct domains in the cell membrane." [GOC:BHF, GOC:sjp, PMID:15620359]


id: GO:0097113
name: AMPA glutamate receptor clustering
namespace: biological_process
def:
  "The glutamate receptor clustering process in which alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate (AMPA) receptors are localized to distinct domains in the cell membrane." [GOC:BHF, GOC:pr, GOC:sjp, PMID:12796785]


id: GO:0097114
name: NMDA glutamate receptor clustering
namespace: biological_process
def:
  "The receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane." [GOC:BHF, GOC:sjp, PMID:15620359]


id: GO:0097115
name: neurexin clustering involved in presynaptic membrane assembly
namespace: biological_process
def:
  "The receptor clustering process involved in assembly of the presynaptic membrane in which neurexins are localized to distinct domains in the cell membrane. Neurexins are synaptic cell surface proteins which act as cell recognition molecules at nerve terminals." [GOC:BHF, GOC:sjp, PMID:12796785]


id: GO:0097116
name: gephyrin clustering involved in postsynaptic density assembly
namespace: biological_process
def:
  "The clustering process in which gephyrin molecules are localized to distinct domains in the postsynaptic density as part of postsynaptic density assembly. Gephyrin is a component of the postsynaptic protein network of inhibitory synapses." [GOC:BHF, GOC:sjp, PMID:15620359, PMID:24552784, PMID:25772192]


id: GO:0097117
name: guanylate kinase-associated protein clustering
namespace: biological_process
def:
  "The clustering process in which guanylate kinase-associated proteins (GKAPs) are localized to distinct domains in the cell membrane. GKAP facilitates assembly of the post synaptic density of neurons." [GOC:BHF, GOC:sjp, PMID:15620359]


id: GO:0097118
name: neuroligin clustering involved in postsynaptic membrane assembly
namespace: biological_process
def:
  "The receptor clustering process involved in assembly of the postsynaptic membrane in which neuroligins are localized to distinct domains in the cell membrane. Neuroligins are neuronal cell surface proteins on the postsynaptic membrane that mediate synapse formation between neurons." [GOC:BHF, GOC:sjp, PMID:12796785]


id: GO:0097119
name: postsynaptic density protein 95 clustering
namespace: biological_process
def:
  "The clustering process in which postsynaptic density protein 95 (PSD-95) molecules are localized to distinct domains in the cell membrane. PSD-95 is mostly located in the post synaptic density of neurons, and is involved in anchoring synaptic proteins." [GOC:BHF, GOC:sjp, PMID:10433269]


