/*
 * Copyright (c) 2007-2010 by The Broad Institute, Inc. and the Massachusetts Institute of Technology.
 * All Rights Reserved.
 *
 * This software is licensed under the terms of the GNU Lesser General Public License (LGPL), Version 2.1 which
 * is available at http://www.opensource.org/licenses/lgpl-2.1.php.
 *
 * THE SOFTWARE IS PROVIDED "AS IS." THE BROAD AND MIT MAKE NO REPRESENTATIONS OR WARRANTIES OF
 * ANY KIND CONCERNING THE SOFTWARE, EXPRESS OR IMPLIED, INCLUDING, WITHOUT LIMITATION, WARRANTIES
 * OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT
 * OR OTHER DEFECTS, WHETHER OR NOT DISCOVERABLE.  IN NO EVENT SHALL THE BROAD OR MIT, OR THEIR
 * RESPECTIVE TRUSTEES, DIRECTORS, OFFICERS, EMPLOYEES, AND AFFILIATES BE LIABLE FOR ANY DAMAGES OF
 * ANY KIND, INCLUDING, WITHOUT LIMITATION, INCIDENTAL OR CONSEQUENTIAL DAMAGES, ECONOMIC
 * DAMAGES OR INJURY TO PROPERTY AND LOST PROFITS, REGARDLESS OF WHETHER THE BROAD OR MIT SHALL
 * BE ADVISED, SHALL HAVE OTHER REASON TO KNOW, OR IN FACT SHALL KNOW OF THE POSSIBILITY OF THE
 * FOREGOING.
 */

package org.broad.igv.util;

import org.apache.log4j.Logger;
import org.apache.commons.net.ftp.FTPClient;
import org.apache.commons.net.ftp.FTPReply;
import org.broad.igv.PreferenceManager;
import org.broad.igv.exceptions.DataLoadException;
import org.broad.igv.ui.IGVMainFrame;

import javax.swing.*;
import java.awt.*;
import java.io.IOException;
import java.io.InputStream;
import java.net.*;
import java.util.HashMap;
import java.util.Map;

public class IGVHttpUtils {

    private static Logger log = Logger.getLogger(IGVHttpUtils.class);

    /**
     * Proxy settings (can be null)
     */
    private static ProxySettings proxySettings = null;
    static boolean byteRangeTested = false;
    static boolean useByteRange = true;

    private static boolean testByteRange() {

        try {
            String testURL = "http://www.broadinstitute.org/igvdata/byteRangeTest.txt";
            byte[] expectedBytes = {(byte) 'k', (byte) 'l', (byte) 'm', (byte) 'n', (byte) 'o'};

            SeekableHTTPStream str = new SeekableHTTPStream(new URL(testURL));
            str.seek(10);
            byte[] buffer = new byte[5];
            str.read(buffer, 0, 5, true);

            for (int i = 0; i < buffer.length; i++) {
                if (buffer[i] != expectedBytes[i]) {
                    return false;
                }
            }
            return true;
        } catch (IOException e) {
            SeekableHTTPStream.log.error("Error while testing byte range ", e);
            return false;
        }
    }

    public static synchronized boolean useByteRange() {
        useByteRange = PreferenceManager.getInstance().isUseByteRange();
        if (useByteRange && !byteRangeTested) {
            try {
                useByteRange = testByteRange();
            } catch (Exception e) {
                log.error("Error testing byte range");
            }
            byteRangeTested = true;
        }
        return useByteRange;
    }


    public static class ProxySettings {
        boolean auth = false;
        String user;
        String pw;
        boolean useProxy;
        String proxyHost;
        int proxyPort = -1;

        public ProxySettings(boolean useProxy, String user, String pw, boolean auth, String proxyHost, int proxyPort) {
            this.auth = auth;
            this.proxyHost = proxyHost;
            this.proxyPort = proxyPort;
            this.pw = pw;
            this.useProxy = useProxy;
            this.user = user;
        }
    }


    /**
     * Wraps url.openConnection(),  and adds proxy authentication if required.
     *
     * @param url
     * @return
     * @throws java.io.IOException
     */


    public static InputStream openConnectionStream(URL url) throws IOException {
        if (url.getProtocol().toUpperCase().equals("FTP")) {
            return openFtpStream(url);
        } else {
            return openHttpStream(url, (Map<String, String>) null);
        }
    }


    public static InputStream openHttpStream(URL url, Map<String, String> requestProperties) throws IOException {

        HttpURLConnection conn = openConnectionPrivate(url, requestProperties);
        return openHttpStream(url, conn);


    }

    public static InputStream openHttpStream(URL url, HttpURLConnection conn) throws IOException {
        // IF this is a protected directory we will get a 401.  Continue requesting a user / password until
        // the user cancels or the connectino succeeds.

        while (true) {
            InputStream is = null;
            try {
                is = conn.getInputStream();
                return is;
            }
            catch (SocketTimeoutException e) {
                throw e;
            }
            catch (IOException e) {
                if (conn.getResponseCode() == 401) {
                    if (is != null) {
                        is.close();
                    }
                    conn.disconnect();

                    if (getUserPass(url.toExternalForm()) == false) {
                        throw e;
                    } else {
                        Map<String, String> requestProperties = new HashMap();
                        for (Map.Entry<String, java.util.List<String>> entry : conn.getRequestProperties().entrySet()) {
                            if (entry.getValue().size() > 0) {
                                requestProperties.put(entry.getKey(), entry.getValue().get(0));
                            }
                        }
                        conn.getRequestProperties();
                        conn = openConnectionPrivate(url, null);
                    }

                } else {
                    throw e;
                }
            }

        }
    }

    private static InputStream openFtpStream(URL url) throws IOException {

        String host = url.getHost();

        FTPClient ftp = new FTPClient();
        ftp.connect(host);
        System.out.println(ftp.getReplyString());

        // After connection attempt, you should check the reply code to verify
        // success.
        int reply = ftp.getReplyCode();

        if (!FTPReply.isPositiveCompletion(reply)) {
            ftp.disconnect();
            System.err.println("FTP server refused connection.");
            throw new RuntimeException("FTP server refused connection.");
        }

        boolean success = ftp.login("anonymous", "igv-team@broadinstitute.org");
        if (!success) {
            System.err.println("FTP login failed " + ftp.getReplyString());
            throw new RuntimeException("FTP login failed " + ftp.getReplyString());
        }

        // Use passive mode as default because most of us are
        // behind firewalls these days.
        ftp.enterLocalPassiveMode();


        String file = url.getPath();
        System.out.println("Open file: " + file);
        return ftp.retrieveFileStream(file);
    }


    private static HttpURLConnection openConnectionPrivate(URL url, Map<String, String> requestProperties) throws IOException {
        HttpURLConnection conn = openConnection(url);
        conn.setConnectTimeout(10000);
        conn.setReadTimeout(60000);
        conn.setRequestMethod("GET");
        conn.setRequestProperty("Connection", "close");
        if (requestProperties != null) {
            for (Map.Entry<String, String> prop : requestProperties.entrySet()) {
                conn.setRequestProperty(prop.getKey(), prop.getValue());
            }
        }
        return conn;
    }


    public static HttpURLConnection openConnection(URL url) throws IOException {
        if (useProxy()) {
            Proxy proxy = new Proxy(Proxy.Type.HTTP, new InetSocketAddress(proxySettings.proxyHost, proxySettings.proxyPort));
            HttpURLConnection conn = (HttpURLConnection) url.openConnection(proxy);
            if (proxySettings.auth && proxySettings.user != null && proxySettings.pw != null) {
                String encodedUserPwd = base64Encode(proxySettings.user + ":" + proxySettings.pw);
                conn.setRequestProperty("Proxy-Authorization", "Basic " + encodedUserPwd);
            }
            return conn;
        } else {
            HttpURLConnection conn = (HttpURLConnection) url.openConnection();
            return conn;

        }
    }

    private static boolean useProxy() {
        return proxySettings != null && proxySettings.useProxy && proxySettings.proxyHost != null && proxySettings.proxyPort > 0;
    }


    /**
     * Todo,  add comment -- what is returned
     *
     * @param locationString
     * @return
     */
    public static boolean getUserPass(String locationString) {

        //http://www.broadinstitute.org/igvdata/private/cpgIslands.hg18.bed
        JPanel passPanel = new JPanel();
        passPanel.setLayout(new GridLayout(6, 1));

        JLabel message = new JLabel("Please enter your Username and Password");
        JLabel location = new JLabel(locationString);
        JLabel username = new JLabel("User:");
        JLabel password = new JLabel("Pass:");
        JTextField userField = new JTextField();
        JPasswordField passwordField = new JPasswordField();
        passPanel.add(message);
        passPanel.add(location);
        passPanel.add(username);
        passPanel.add(userField);
        passPanel.add(password);
        passPanel.add(passwordField);

        int a = JOptionPane.showConfirmDialog(IGVMainFrame.getInstance(), passPanel, "Authentication Required", JOptionPane.OK_CANCEL_OPTION, JOptionPane.QUESTION_MESSAGE);

        if (a == JOptionPane.CANCEL_OPTION) {
            return false;
        } else {
            final String userString = userField.getText();
            final char[] userPass = passwordField.getPassword();
            Authenticator.setDefault(new Authenticator() {
                protected PasswordAuthentication getPasswordAuthentication() {
                    return new PasswordAuthentication(userString, userPass);
                }
            });
            return true;
        }
    }

    public static void updateProxySettings() {


        boolean useProxy;
        String proxyHost;
        int proxyPort = -1;
        boolean auth = false;
        String user = null;
        String pw = null;

        PreferenceManager prefMgr = PreferenceManager.getInstance();
        useProxy = prefMgr.getBooleanPreference(PreferenceManager.USE_PROXY, false);
        proxyHost = prefMgr.get(PreferenceManager.PROXY_HOST, null);
        try {
            proxyPort = Integer.parseInt(prefMgr.get(PreferenceManager.PROXY_PORT, "-1"));
        } catch (NumberFormatException e) {
            proxyPort = -1;
        }
        auth = prefMgr.getBooleanPreference(PreferenceManager.PROXY_AUTHENTICATE, false);
        user = prefMgr.get(PreferenceManager.PROXY_USER, null);
        String pwString = prefMgr.get(PreferenceManager.PROXY_PW, null);
        if (pwString != null) {
            pw = Utilities.base64Decode(pwString);
        }


        ProxySettings proxySettings = new ProxySettings(useProxy, user, pw, auth, proxyHost, proxyPort);
        setProxySettings(proxySettings);
    }


    // TODO -- replace use of sun package

    public static String base64Encode(String str) {
        sun.misc.BASE64Encoder encoder = new sun.misc.BASE64Encoder();
        byte[] bytes = str.getBytes();
        return encoder.encode(bytes);

    }

    // TODO -- replace use of sun package

    public static String base64Decode(String str) {
        try {
            return new String((new sun.misc.BASE64Decoder()).decodeBuffer(str));
        } catch (IOException e) {
            log.error("Error decoding string: " + str, e);
            return str;
        }
    }


    public static void setProxySettings(ProxySettings ps) {
        proxySettings = ps;
    }

    public static String getETag(URL url) {
        return getHeaderField(url, "ETag");
    }

    public static String getHeaderField(URL url, String name) {

        URLConnection conn = null;
        try {
            // Create a URLConnection object for a URL
            conn = openConnection(url);
            conn.setReadTimeout(5000);
            ((HttpURLConnection) conn).setRequestMethod("HEAD"); 
            return conn.getHeaderField(name);

        } catch (Exception e) {
            e.printStackTrace();
            return null;
        }
        finally {
            if (conn != null && conn instanceof HttpURLConnection) {
                ((HttpURLConnection) conn).disconnect();
            }
        }
    }

    public static boolean resourceAvailable(URL url) {
        URLConnection conn = null;
        try {
            // Create a URLConnection object for a URL
            conn = openConnection(url);
            ((HttpURLConnection) conn).setRequestMethod("HEAD");
            conn.setReadTimeout(5000);
            return conn.getHeaderField("ETag") != null;
        } catch (Exception e) {
            return false;
        }
        finally {
            if (conn != null && conn instanceof HttpURLConnection) {
                ((HttpURLConnection) conn).disconnect();
            }
        }
    }

}
